MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.01-22-ge34f5c67fec9) initialized Starting run at 06:33:09 UTC on 2022-01-13. Successfully read inputs file ... Castro git describe: 21.12-23-g727e39bb6 AMReX git describe: 22.01-22-ge34f5c67f Microphysics git describe: 22.01-14-geeef682d reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015006792 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.348795513 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.371713723 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.330861081 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.330209119 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.350717315 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.323109496 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.311718933 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.311196181 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.313193608 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.311093722 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010646143 seconds Ending run at 06:33:13 UTC on 2022-01-13. Run time = 3.52142477 Run time without initialization = 3.317587137 Average number of zones advanced per microsecond: 0.790 Average number of zones advanced per microsecond per rank: 0.099 TinyProfiler total time across processes [min...avg...max]: 3.521 ... 3.521 ... 3.521 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2575 2.3451 2.4058 68.32% Gravity::make_radial_gravity() 21 0.3358 0.3478 0.3686 10.47% MultiFab::min() 10 0.01808 0.08001 0.1729 4.91% Castro::initData() 1 0.05017 0.08752 0.1385 3.93% Castro::estTimeStep() 21 0.02507 0.07473 0.1146 3.25% FabArray::ParallelCopy_finish() 41 0.0337 0.0463 0.07746 2.20% FabArray::setVal() 139 0.05592 0.06644 0.07481 2.12% Castro::reset_internal_energy() 63 0.04669 0.04952 0.05117 1.45% Castro::normalize_species() 62 0.04258 0.04417 0.04562 1.30% StateData::FillBoundary(geom) 41 0.03927 0.04301 0.04551 1.29% FabArray::ParallelCopy_nowait() 41 0.03575 0.04089 0.04303 1.22% FillPatchIterator::Initialize 41 0.02492 0.03123 0.03347 0.95% Gravity::interpolate_monopole_grav() 21 0.02785 0.02844 0.02894 0.82% Castro::construct_new_gravity_source() 10 0.02137 0.02304 0.02538 0.72% Castro::do_advance_ctu() 10 0.01584 0.01963 0.02334 0.66% Castro::expand_state() 10 0.01185 0.01692 0.01956 0.56% Castro::computeTemp() 63 0.01755 0.01806 0.01892 0.54% Castro::initialize_do_advance() 10 0.01075 0.01566 0.01718 0.49% VisMF::Write(FabArray) 2 0.013 0.01384 0.01689 0.48% MultiFab::Saxpy() 20 0.01233 0.01359 0.0147 0.42% FabArray::setDomainBndry() 41 0.006984 0.01077 0.01312 0.37% Amr::writePlotFile() 2 0.008998 0.01194 0.01282 0.36% Gravity::get_new_grav_vector() 11 0.01022 0.0112 0.01279 0.36% Castro::initialize_advance() 10 0.004578 0.009992 0.01253 0.36% MultiFab::contains_nan() 20 0.01013 0.01078 0.0117 0.33% Castro::construct_old_gravity_source() 10 0.007378 0.0102 0.01094 0.31% Gravity::get_old_grav_vector() 10 0.007661 0.009142 0.0103 0.29% Amr::defBaseLevel() 1 0.006996 0.007451 0.00774 0.22% Castro::enforce_min_density() 62 0.006699 0.006991 0.007312 0.21% Castro::construct_new_source() 50 0.005832 0.006435 0.006682 0.19% StateData::define() 4 0.004427 0.004731 0.004912 0.14% Castro::swap_state_time_levels() 10 0.001711 0.003473 0.00426 0.12% main() 1 0.003908 0.004083 0.004257 0.12% Amr::coarseTimeStep() 10 0.000598 0.0008964 0.001766 0.05% Castro::finalize_do_advance() 10 0.000518 0.001068 0.001233 0.04% Castro::clean_state() 62 0.001042 0.001074 0.001099 0.03% Amr::timeStep() 10 0.0002628 0.0003314 0.0006455 0.02% FabArray::ParallelCopy() 41 0.0004312 0.0004513 0.0004858 0.01% FillPatchSingleLevel 41 0.00042 0.0004443 0.0004754 0.01% Amr::InitAmr() 1 0.0002843 0.0003234 0.0004534 0.01% Castro::do_old_sources() 10 0.0003469 0.0003601 0.0003838 0.01% StateDataPhysBCFunct::() 41 0.0003408 0.000359 0.000378 0.01% Castro::do_new_sources() 10 0.0003472 0.0003569 0.0003685 0.01% Castro::construct_old_source() 50 0.0002672 0.0002787 0.0002924 0.01% Castro::enforce_speed_limit() 62 0.0002031 0.0002098 0.0002272 0.01% DistributionMapping::LeastUsedCPUs() 1 7.584e-06 0.0001686 0.0002077 0.01% FabArrayBase::getCPC() 41 0.0001727 0.0001893 0.0002063 0.01% Castro::advance() 10 0.0001755 0.0001817 0.0001949 0.01% Castro::apply_source_to_state() 20 0.0001592 0.0001709 0.0001807 0.01% Castro::finalize_advance() 10 0.0001488 0.0001548 0.0001667 0.00% Castro::construct_new_gravity() 10 0.0001197 0.0001382 0.0001649 0.00% Castro::construct_old_gravity() 10 0.0001435 0.0001542 0.0001649 0.00% Castro::check_for_nan() 20 0.0001383 0.0001466 0.0001638 0.00% Castro::subcycle_advance_ctu() 10 0.0001322 0.0001432 0.0001588 0.00% Amr::FinalizeInit() 1 1.425e-05 2.58e-05 0.0001 0.00% Castro::enforce_consistent_e() 1 8.325e-05 8.896e-05 9.596e-05 0.00% Castro::computeNewDt() 9 6.108e-05 6.607e-05 8.846e-05 0.00% Amr::writeSmallPlotFile() 1 3.321e-05 4.203e-05 7.017e-05 0.00% Castro::post_timestep() 10 6.451e-05 6.663e-05 6.879e-05 0.00% Castro::create_source_corrector() 10 3.821e-05 4.608e-05 5.771e-05 0.00% Gravity::swapTimeLevels() 10 3.483e-05 4.3e-05 5.562e-05 0.00% Castro::retry_advance_ctu() 10 3.579e-05 3.833e-05 5.225e-05 0.00% Gravity::set_mass_offset() 10 3.283e-05 3.641e-05 4.996e-05 0.00% FabArrayBase::CPC::define() 2 2.496e-05 3.191e-05 4.292e-05 0.00% Castro::FluxRegFineAdd() 10 3.6e-05 3.641e-05 3.7e-05 0.00% AmrLevel::AmrLevel(dm) 1 2.104e-05 2.262e-05 2.371e-05 0.00% Castro::post_init() 1 1.358e-05 1.88e-05 2.35e-05 0.00% Amr::InitializeInit() 1 6.584e-06 8.792e-06 1.763e-05 0.00% Castro::computeInitialDt() 2 1.221e-05 1.338e-05 1.579e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 1.004e-05 1.129e-05 1.354e-05 0.00% Amr::initSubcycle() 1 1.158e-05 1.241e-05 1.329e-05 0.00% Amr::init() 1 8.917e-06 9.771e-06 1.083e-05 0.00% Amr::initialInit() 1 8.834e-06 9.51e-06 1.054e-05 0.00% Castro::post_regrid() 1 6.208e-06 7.875e-06 8.833e-06 0.00% DistributionMapping::Distribute() 1 2.5e-06 3.214e-06 4.167e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.521 3.521 3.521 100.00% Amr::coarseTimeStep() 10 3.303 3.303 3.303 93.79% Amr::timeStep() 10 3.293 3.294 3.294 93.54% Castro::advance() 10 3.276 3.277 3.277 93.06% Castro::subcycle_advance_ctu() 10 3.202 3.208 3.221 91.48% Castro::do_advance_ctu() 10 3.202 3.208 3.221 91.47% Castro::construct_ctu_hydro_source() 10 2.258 2.345 2.406 68.32% Gravity::make_radial_gravity() 21 0.3358 0.3478 0.3686 10.47% Gravity::get_new_grav_vector() 11 0.2256 0.2276 0.2292 6.51% Castro::construct_old_gravity() 10 0.1986 0.2077 0.2236 6.35% Gravity::get_old_grav_vector() 10 0.1977 0.2068 0.2228 6.33% Amr::init() 1 0.2032 0.2034 0.2034 5.78% Castro::construct_new_gravity() 10 0.1995 0.2011 0.2022 5.74% Amr::initialInit() 1 0.188 0.1883 0.1887 5.36% FillPatchIterator::Initialize 41 0.1621 0.1737 0.186 5.28% MultiFab::min() 10 0.01808 0.08001 0.1729 4.91% Castro::initialize_do_advance() 10 0.1487 0.1604 0.1704 4.84% Amr::InitializeInit() 1 0.07005 0.1067 0.1584 4.50% Amr::defBaseLevel() 1 0.07004 0.1067 0.1584 4.50% FillPatchSingleLevel 41 0.1214 0.1317 0.1541 4.37% Castro::initData() 1 0.05443 0.0917 0.1428 4.05% Castro::clean_state() 62 0.114 0.119 0.1231 3.49% Castro::expand_state() 10 0.1039 0.1139 0.1228 3.49% Amr::FinalizeInit() 1 0.0303 0.08162 0.1181 3.35% Castro::estTimeStep() 21 0.02507 0.07473 0.1146 3.25% FabArray::ParallelCopy() 41 0.07607 0.08786 0.1139 3.24% Castro::computeInitialDt() 2 0.002094 0.05377 0.09041 2.57% FabArray::ParallelCopy_finish() 41 0.0337 0.0463 0.07746 2.20% FabArray::setVal() 139 0.05592 0.06644 0.07481 2.12% Castro::initialize_advance() 10 0.05459 0.06862 0.07481 2.12% Castro::computeTemp() 63 0.06424 0.06759 0.07009 1.99% Castro::do_new_sources() 10 0.05827 0.06265 0.06806 1.93% Castro::reset_internal_energy() 63 0.04669 0.04952 0.05117 1.45% Castro::do_old_sources() 10 0.03947 0.04553 0.04711 1.34% StateDataPhysBCFunct::() 41 0.03965 0.04337 0.04588 1.30% Castro::normalize_species() 62 0.04258 0.04417 0.04562 1.30% StateData::FillBoundary(geom) 41 0.03927 0.04301 0.04551 1.29% FabArray::ParallelCopy_nowait() 41 0.03599 0.04111 0.04324 1.23% Castro::construct_new_source() 50 0.02784 0.02948 0.0319 0.91% Gravity::interpolate_monopole_grav() 21 0.02785 0.02844 0.02894 0.82% Castro::post_init() 1 0.02717 0.02752 0.02774 0.79% Amr::writePlotFile() 2 0.02542 0.02578 0.02598 0.74% Castro::construct_new_gravity_source() 10 0.02137 0.02304 0.02538 0.72% VisMF::Write(FabArray) 2 0.013 0.01384 0.01689 0.48% Castro::post_timestep() 10 0.01602 0.01632 0.01653 0.47% Castro::apply_source_to_state() 20 0.01251 0.01376 0.01487 0.42% MultiFab::Saxpy() 20 0.01233 0.01359 0.0147 0.42% FabArray::setDomainBndry() 41 0.006984 0.01077 0.01312 0.37% Castro::check_for_nan() 20 0.01028 0.01092 0.01186 0.34% MultiFab::contains_nan() 20 0.01013 0.01078 0.0117 0.33% Castro::construct_old_source() 50 0.00766 0.01048 0.01124 0.32% Castro::construct_old_gravity_source() 10 0.007378 0.0102 0.01094 0.31% Castro::computeNewDt() 9 0.006372 0.006942 0.007363 0.21% Castro::enforce_min_density() 62 0.006699 0.006991 0.007312 0.21% AmrLevel::AmrLevel(dm) 1 0.004449 0.004753 0.004936 0.14% StateData::define() 4 0.004427 0.004731 0.004912 0.14% Castro::swap_state_time_levels() 10 0.001711 0.003473 0.00426 0.12% Castro::post_regrid() 1 0.001443 0.00153 0.001741 0.05% Castro::finalize_do_advance() 10 0.000518 0.001068 0.001233 0.04% Amr::InitAmr() 1 0.0002968 0.0003358 0.0004665 0.01% FabArrayBase::getCPC() 41 0.000201 0.0002212 0.0002492 0.01% Castro::enforce_speed_limit() 62 0.0002031 0.0002098 0.0002272 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 2.375e-05 0.0001831 0.0002238 0.01% DistributionMapping::LeastUsedCPUs() 1 7.584e-06 0.0001686 0.0002077 0.01% Castro::finalize_advance() 10 0.0001852 0.0001913 0.0002028 0.01% Castro::enforce_consistent_e() 1 8.325e-05 8.896e-05 9.596e-05 0.00% Amr::writeSmallPlotFile() 1 3.321e-05 4.203e-05 7.017e-05 0.00% Castro::create_source_corrector() 10 3.821e-05 4.608e-05 5.771e-05 0.00% Gravity::swapTimeLevels() 10 3.483e-05 4.3e-05 5.562e-05 0.00% Castro::retry_advance_ctu() 10 3.579e-05 3.833e-05 5.225e-05 0.00% Gravity::set_mass_offset() 10 3.283e-05 3.641e-05 4.996e-05 0.00% FabArrayBase::CPC::define() 2 2.496e-05 3.191e-05 4.292e-05 0.00% Castro::FluxRegFineAdd() 10 3.6e-05 3.641e-05 3.7e-05 0.00% Amr::initSubcycle() 1 1.158e-05 1.241e-05 1.329e-05 0.00% DistributionMapping::Distribute() 1 2.5e-06 3.214e-06 4.167e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.01-22-ge34f5c67fec9) finalized