MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.01-26-g65f906216a5e) initialized Starting run at 02:57:37 UTC on 2022-01-15. Successfully read inputs file ... Castro git describe: 21.12-26-g120179a78 AMReX git describe: 22.01-26-g65f906216 Microphysics git describe: 22.01-19-gd89cb25c reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014495492 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.35379953 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.356284334 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.330401076 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.329621072 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.346258699 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.322821912 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.306697162 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.309001799 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.306833621 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.308458088 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010615846 seconds Ending run at 02:57:41 UTC on 2022-01-15. Run time = 3.472826481 Run time without initialization = 3.284715414 Average number of zones advanced per microsecond: 0.798 Average number of zones advanced per microsecond per rank: 0.100 TinyProfiler total time across processes [min...avg...max]: 3.472 ... 3.473 ... 3.473 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2894 2.3144 2.3426 67.45% Gravity::make_radial_gravity() 21 0.3325 0.3458 0.357 10.28% Castro::initData() 1 0.05524 0.08644 0.1235 3.56% Castro::estTimeStep() 21 0.02809 0.06243 0.09673 2.79% MultiFab::min() 10 0.03587 0.06568 0.09505 2.74% FabArray::setVal() 139 0.06348 0.07211 0.08033 2.31% Castro::reset_internal_energy() 63 0.04678 0.0489 0.05052 1.45% FabArray::ParallelCopy_finish() 41 0.03366 0.04279 0.04951 1.43% StateData::FillBoundary(geom) 41 0.03962 0.04247 0.04567 1.31% FabArray::ParallelCopy_nowait() 41 0.03985 0.0422 0.04375 1.26% Castro::normalize_species() 62 0.04181 0.04286 0.04366 1.26% FillPatchIterator::Initialize 41 0.02647 0.03196 0.03477 1.00% Gravity::interpolate_monopole_grav() 21 0.02781 0.02805 0.02828 0.81% Castro::construct_new_gravity_source() 10 0.0212 0.0238 0.02626 0.76% Castro::do_advance_ctu() 10 0.01652 0.02033 0.02362 0.68% Castro::expand_state() 10 0.01448 0.01841 0.02083 0.60% Castro::computeTemp() 63 0.01733 0.01774 0.01833 0.53% Castro::initialize_do_advance() 10 0.01443 0.01684 0.01821 0.52% MultiFab::Saxpy() 20 0.01359 0.01483 0.01564 0.45% VisMF::Write(FabArray) 2 0.0131 0.0135 0.01559 0.45% Gravity::get_new_grav_vector() 11 0.01003 0.01167 0.01439 0.41% Castro::initialize_advance() 10 0.01011 0.01193 0.01384 0.40% FabArray::setDomainBndry() 41 0.007749 0.01063 0.01249 0.36% MultiFab::contains_nan() 20 0.01038 0.01129 0.01247 0.36% Amr::writePlotFile() 2 0.009762 0.01176 0.0124 0.36% Castro::construct_old_gravity_source() 10 0.01019 0.01104 0.01174 0.34% Gravity::get_old_grav_vector() 10 0.008329 0.009138 0.01034 0.30% Amr::defBaseLevel() 1 0.006779 0.00854 0.01023 0.29% Castro::enforce_min_density() 62 0.006046 0.006474 0.006847 0.20% Castro::construct_new_source() 50 0.00627 0.006616 0.006841 0.20% StateData::define() 4 0.004356 0.005478 0.006541 0.19% main() 1 0.003514 0.004043 0.004447 0.13% Castro::swap_state_time_levels() 10 0.002786 0.003722 0.003887 0.11% Castro::finalize_do_advance() 10 0.001366 0.001465 0.001539 0.04% Amr::coarseTimeStep() 10 0.0005621 0.0007618 0.001481 0.04% Castro::clean_state() 62 0.001059 0.001082 0.001116 0.03% Amr::InitAmr() 1 0.0002665 0.0003962 0.0006116 0.02% Amr::timeStep() 10 0.0002354 0.0003144 0.0005367 0.02% FabArray::ParallelCopy() 41 0.0004366 0.000448 0.0004653 0.01% FillPatchSingleLevel 41 0.0004221 0.0004336 0.0004475 0.01% DistributionMapping::LeastUsedCPUs() 1 9.375e-06 0.0002613 0.0003984 0.01% StateDataPhysBCFunct::() 41 0.0003525 0.0003636 0.0003945 0.01% Castro::do_old_sources() 10 0.0003415 0.0003626 0.0003808 0.01% Castro::do_new_sources() 10 0.0003499 0.0003612 0.0003801 0.01% Castro::construct_old_source() 50 0.000264 0.0002842 0.0003077 0.01% Castro::enforce_speed_limit() 62 0.000205 0.0002109 0.0002257 0.01% Castro::advance() 10 0.0001724 0.0001807 0.0001937 0.01% FabArrayBase::getCPC() 41 0.0001703 0.0001805 0.0001903 0.01% Castro::apply_source_to_state() 20 0.0001662 0.0001715 0.0001808 0.01% Castro::construct_old_gravity() 10 0.0001433 0.0001528 0.0001677 0.00% Castro::construct_new_gravity() 10 0.0001157 0.0001414 0.0001666 0.00% Castro::finalize_advance() 10 0.0001447 0.0001524 0.0001614 0.00% Castro::check_for_nan() 20 0.0001364 0.000146 0.0001595 0.00% Castro::subcycle_advance_ctu() 10 0.00012 0.0001275 0.0001421 0.00% Amr::FinalizeInit() 1 1.508e-05 3.553e-05 0.0001268 0.00% Castro::enforce_consistent_e() 1 8.058e-05 8.571e-05 9.283e-05 0.00% Castro::post_timestep() 10 6.558e-05 7.156e-05 8.133e-05 0.00% Castro::computeNewDt() 9 5.929e-05 6.405e-05 7.567e-05 0.00% Gravity::set_mass_offset() 10 3.254e-05 3.808e-05 5.179e-05 0.00% Castro::create_source_corrector() 10 4.362e-05 4.482e-05 4.646e-05 0.00% Amr::writeSmallPlotFile() 1 2.804e-05 3.812e-05 4.471e-05 0.00% FabArrayBase::CPC::define() 2 2.804e-05 3.251e-05 4.434e-05 0.00% Gravity::swapTimeLevels() 10 3.571e-05 3.796e-05 4.046e-05 0.00% Castro::FluxRegFineAdd() 10 3.633e-05 3.695e-05 3.742e-05 0.00% Castro::retry_advance_ctu() 10 3.375e-05 3.611e-05 3.725e-05 0.00% Amr::initialInit() 1 9.416e-06 1.418e-05 3.579e-05 0.00% Castro::computeInitialDt() 2 1.417e-05 1.977e-05 3.246e-05 0.00% AmrLevel::AmrLevel(dm) 1 2.233e-05 2.428e-05 2.679e-05 0.00% Amr::initSubcycle() 1 9.5e-06 1.48e-05 1.867e-05 0.00% Castro::post_init() 1 1.196e-05 1.366e-05 1.667e-05 0.00% Castro::post_regrid() 1 8.418e-06 1.267e-05 1.513e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 1.183e-05 1.309e-05 1.396e-05 0.00% Amr::InitializeInit() 1 7.083e-06 8.75e-06 1.246e-05 0.00% Amr::init() 1 9.667e-06 1.108e-05 1.183e-05 0.00% DistributionMapping::Distribute() 1 2.5e-06 3.469e-06 4.5e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.472 3.473 3.473 100.00% Amr::coarseTimeStep() 10 3.27 3.27 3.27 94.15% Amr::timeStep() 10 3.261 3.261 3.262 93.92% Castro::advance() 10 3.245 3.245 3.245 93.43% Castro::subcycle_advance_ctu() 10 3.165 3.17 3.176 91.44% Castro::do_advance_ctu() 10 3.165 3.17 3.175 91.44% Castro::construct_ctu_hydro_source() 10 2.289 2.314 2.343 67.45% Gravity::make_radial_gravity() 21 0.3325 0.3458 0.357 10.28% Gravity::get_new_grav_vector() 11 0.2242 0.2258 0.2278 6.56% Castro::construct_old_gravity() 10 0.1996 0.2082 0.2164 6.23% Gravity::get_old_grav_vector() 10 0.1987 0.2073 0.2156 6.21% Castro::construct_new_gravity() 10 0.2012 0.2023 0.2036 5.86% Amr::init() 1 0.1873 0.1876 0.1877 5.41% FillPatchIterator::Initialize 41 0.1641 0.1715 0.1849 5.32% Amr::initialInit() 1 0.1727 0.173 0.1733 4.99% Castro::initialize_do_advance() 10 0.149 0.1602 0.1718 4.95% Amr::InitializeInit() 1 0.07783 0.1064 0.1461 4.21% Amr::defBaseLevel() 1 0.07782 0.1064 0.1461 4.21% FillPatchSingleLevel 41 0.1237 0.1289 0.1386 3.99% Castro::initData() 1 0.05879 0.09012 0.1271 3.66% Castro::expand_state() 10 0.1031 0.1132 0.1254 3.61% Castro::clean_state() 62 0.1133 0.1163 0.1187 3.42% Castro::estTimeStep() 21 0.02809 0.06243 0.09673 2.79% Amr::FinalizeInit() 1 0.02655 0.06661 0.09523 2.74% MultiFab::min() 10 0.03587 0.06568 0.09505 2.74% FabArray::ParallelCopy() 41 0.07807 0.08565 0.09383 2.70% FabArray::setVal() 139 0.06348 0.07211 0.08033 2.31% Castro::initialize_advance() 10 0.06861 0.07449 0.07919 2.28% Castro::do_new_sources() 10 0.05858 0.06531 0.07127 2.05% Castro::computeInitialDt() 2 0.001512 0.04135 0.06982 2.01% Castro::computeTemp() 63 0.06417 0.06664 0.06835 1.97% Castro::reset_internal_energy() 63 0.04678 0.0489 0.05052 1.45% FabArray::ParallelCopy_finish() 41 0.03366 0.04279 0.04951 1.43% Castro::do_old_sources() 10 0.04633 0.04728 0.04806 1.38% StateDataPhysBCFunct::() 41 0.03998 0.04283 0.04602 1.33% StateData::FillBoundary(geom) 41 0.03962 0.04247 0.04567 1.31% FabArray::ParallelCopy_nowait() 41 0.04007 0.04241 0.04397 1.27% Castro::normalize_species() 62 0.04181 0.04286 0.04366 1.26% Castro::construct_new_source() 50 0.02747 0.03041 0.03296 0.95% Gravity::interpolate_monopole_grav() 21 0.02781 0.02805 0.02828 0.81% Castro::construct_new_gravity_source() 10 0.0212 0.0238 0.02626 0.76% Amr::writePlotFile() 2 0.02508 0.02527 0.0255 0.73% Castro::post_init() 1 0.02448 0.02468 0.02486 0.72% Castro::post_timestep() 10 0.01584 0.01608 0.01688 0.49% Castro::apply_source_to_state() 20 0.01375 0.015 0.01581 0.46% MultiFab::Saxpy() 20 0.01359 0.01483 0.01564 0.45% VisMF::Write(FabArray) 2 0.0131 0.0135 0.01559 0.45% Castro::check_for_nan() 20 0.01052 0.01143 0.01263 0.36% FabArray::setDomainBndry() 41 0.007749 0.01063 0.01249 0.36% MultiFab::contains_nan() 20 0.01038 0.01129 0.01247 0.36% Castro::construct_old_source() 50 0.01045 0.01133 0.01202 0.35% Castro::construct_old_gravity_source() 10 0.01019 0.01104 0.01174 0.34% Castro::computeNewDt() 9 0.006286 0.007075 0.007541 0.22% Castro::enforce_min_density() 62 0.006046 0.006474 0.006847 0.20% AmrLevel::AmrLevel(dm) 1 0.00438 0.005502 0.006567 0.19% StateData::define() 4 0.004356 0.005478 0.006541 0.19% Castro::swap_state_time_levels() 10 0.002786 0.003722 0.003887 0.11% Castro::finalize_do_advance() 10 0.001366 0.001465 0.001539 0.04% Castro::post_regrid() 1 0.001381 0.00141 0.001447 0.04% Amr::InitAmr() 1 0.0002791 0.000411 0.0006303 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 2.596e-05 0.0002779 0.0004148 0.01% DistributionMapping::LeastUsedCPUs() 1 9.375e-06 0.0002613 0.0003984 0.01% Castro::enforce_speed_limit() 62 0.000205 0.0002109 0.0002257 0.01% FabArrayBase::getCPC() 41 0.0002022 0.000213 0.0002206 0.01% Castro::finalize_advance() 10 0.0001815 0.0001894 0.0001988 0.01% Castro::enforce_consistent_e() 1 8.058e-05 8.571e-05 9.283e-05 0.00% Gravity::set_mass_offset() 10 3.254e-05 3.808e-05 5.179e-05 0.00% Castro::create_source_corrector() 10 4.362e-05 4.482e-05 4.646e-05 0.00% Amr::writeSmallPlotFile() 1 2.804e-05 3.812e-05 4.471e-05 0.00% FabArrayBase::CPC::define() 2 2.804e-05 3.251e-05 4.434e-05 0.00% Gravity::swapTimeLevels() 10 3.571e-05 3.796e-05 4.046e-05 0.00% Castro::FluxRegFineAdd() 10 3.633e-05 3.695e-05 3.742e-05 0.00% Castro::retry_advance_ctu() 10 3.375e-05 3.611e-05 3.725e-05 0.00% Amr::initSubcycle() 1 9.5e-06 1.48e-05 1.867e-05 0.00% DistributionMapping::Distribute() 1 2.5e-06 3.469e-06 4.5e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.01-26-g65f906216a5e) finalized