MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.01-32-g12548009735e) initialized Starting run at 06:31:45 UTC on 2022-01-19. Successfully read inputs file ... Castro git describe: 21.12-27-g958e0cc7a AMReX git describe: 22.01-32-g125480097 Microphysics git describe: 22.01-20-g1a290c72 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015666406 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.349783302 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.327761185 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.304411633 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.303981691 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.305788459 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.326805396 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.290515531 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.286822771 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.28815658 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.287583544 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.038240185 seconds Ending run at 06:31:49 UTC on 2022-01-19. Run time = 3.361437277 Run time without initialization = 3.113845561 Average number of zones advanced per microsecond: 0.842 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.36 ... 3.361 ... 3.361 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0953 2.1390 2.1734 64.66% Gravity::make_radial_gravity() 21 0.3544 0.3612 0.381 11.33% Castro::initData() 1 0.03814 0.1095 0.1647 4.90% Castro::estTimeStep() 21 0.01879 0.08056 0.1617 4.81% MultiFab::min() 10 0.02588 0.06491 0.1079 3.21% FabArray::ParallelCopy_finish() 41 0.03299 0.04562 0.07622 2.27% FabArray::setVal() 139 0.0609 0.06896 0.07362 2.19% Castro::reset_internal_energy() 63 0.04671 0.05101 0.05346 1.59% StateData::FillBoundary(geom) 41 0.03908 0.04287 0.04533 1.35% Amr::writePlotFile() 2 0.03866 0.04153 0.04302 1.28% FabArray::ParallelCopy_nowait() 41 0.03372 0.03901 0.04104 1.22% Castro::normalize_species() 62 0.03275 0.03398 0.03485 1.04% FillPatchIterator::Initialize 41 0.02398 0.02922 0.03329 0.99% Gravity::interpolate_monopole_grav() 21 0.02785 0.02877 0.02951 0.88% Castro::construct_new_gravity_source() 10 0.0205 0.02351 0.02673 0.80% Castro::do_advance_ctu() 10 0.01392 0.01918 0.02286 0.68% Castro::expand_state() 10 0.01112 0.01781 0.0205 0.61% Castro::computeTemp() 63 0.01735 0.01924 0.02036 0.61% Castro::initialize_do_advance() 10 0.01072 0.01639 0.01887 0.56% MultiFab::Saxpy() 20 0.01309 0.01491 0.01643 0.49% VisMF::Write(FabArray) 2 0.01175 0.01278 0.0155 0.46% Castro::initialize_advance() 10 0.008408 0.01166 0.01363 0.41% Gravity::get_new_grav_vector() 11 0.0094 0.01081 0.01249 0.37% MultiFab::contains_nan() 20 0.01022 0.01112 0.01212 0.36% Castro::construct_old_gravity_source() 10 0.007199 0.01072 0.01171 0.35% FabArray::setDomainBndry() 41 0.007024 0.0091 0.01044 0.31% Amr::defBaseLevel() 1 0.006555 0.008981 0.009761 0.29% Gravity::get_old_grav_vector() 10 0.006664 0.008706 0.009486 0.28% Castro::construct_new_source() 50 0.005665 0.006417 0.006873 0.20% Castro::enforce_min_density() 62 0.005868 0.006256 0.006634 0.20% StateData::define() 4 0.004265 0.005783 0.006249 0.19% Castro::swap_state_time_levels() 10 0.003025 0.004093 0.005245 0.16% main() 1 0.003054 0.003851 0.004346 0.13% Amr::coarseTimeStep() 10 0.0003736 0.0005324 0.001073 0.03% Castro::finalize_do_advance() 10 0.0004631 0.0007853 0.0009143 0.03% Amr::InitAmr() 1 0.0002743 0.0004116 0.0005661 0.02% Amr::timeStep() 10 0.0001681 0.000222 0.0004428 0.01% DistributionMapping::LeastUsedCPUs() 1 7.375e-06 0.0001841 0.0003582 0.01% Castro::clean_state() 62 0.0001289 0.0001464 0.0001768 0.01% Castro::enforce_consistent_e() 1 7.864e-05 0.0001268 0.0001656 0.00% StateDataPhysBCFunct::() 41 0.0001004 0.0001206 0.0001429 0.00% Castro::construct_old_source() 50 6.153e-05 8.071e-05 0.0001058 0.00% FillPatchSingleLevel 41 6.494e-05 7.424e-05 8.65e-05 0.00% FabArray::ParallelCopy() 41 6.415e-05 6.989e-05 8.058e-05 0.00% Castro::do_old_sources() 10 5.367e-05 6.41e-05 7.944e-05 0.00% Castro::do_new_sources() 10 5.978e-05 6.525e-05 7.372e-05 0.00% Castro::finalize_advance() 10 5.048e-05 5.744e-05 7.356e-05 0.00% Amr::writeSmallPlotFile() 1 2.595e-05 6.033e-05 7.166e-05 0.00% Amr::FinalizeInit() 1 4.374e-06 1.345e-05 7.153e-05 0.00% Castro::apply_source_to_state() 20 4.002e-05 5.403e-05 6.853e-05 0.00% FabArrayBase::getCPC() 41 4.662e-05 5.311e-05 6.513e-05 0.00% Castro::construct_old_gravity() 10 4.931e-05 5.636e-05 6.488e-05 0.00% Castro::subcycle_advance_ctu() 10 3.848e-05 5.079e-05 5.791e-05 0.00% Castro::construct_new_gravity() 10 4.007e-05 4.886e-05 5.681e-05 0.00% Castro::advance() 10 3.441e-05 3.653e-05 4.083e-05 0.00% FabArrayBase::CPC::define() 2 2.723e-05 3.303e-05 3.86e-05 0.00% Castro::enforce_speed_limit() 62 2.534e-05 3.141e-05 3.628e-05 0.00% Castro::check_for_nan() 20 2.377e-05 2.676e-05 3.113e-05 0.00% Castro::computeNewDt() 9 7.396e-06 9.949e-06 2.293e-05 0.00% Castro::create_source_corrector() 10 1.439e-05 1.722e-05 2.25e-05 0.00% Gravity::swapTimeLevels() 10 1.219e-05 1.477e-05 2.093e-05 0.00% Amr::initSubcycle() 1 9.131e-06 1.313e-05 1.486e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.718e-06 1.092e-05 1.419e-05 0.00% Castro::post_init() 1 3.375e-06 6.072e-06 1.348e-05 0.00% Gravity::set_mass_offset() 10 7.094e-06 9.205e-06 1.311e-05 0.00% Castro::post_timestep() 10 7.566e-06 9.348e-06 1.079e-05 0.00% Amr::InitializeInit() 1 2.378e-06 3.484e-06 8.382e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.978e-06 4.899e-06 7.336e-06 0.00% Castro::FluxRegFineAdd() 10 5.61e-06 6.318e-06 6.873e-06 0.00% Castro::retry_advance_ctu() 10 5.242e-06 5.758e-06 6.732e-06 0.00% DistributionMapping::Distribute() 1 1.146e-06 1.807e-06 5.469e-06 0.00% Castro::post_regrid() 1 2.914e-06 3.627e-06 4.845e-06 0.00% Castro::computeInitialDt() 2 3.438e-06 4.028e-06 4.643e-06 0.00% Amr::init() 1 2.113e-06 2.503e-06 2.858e-06 0.00% Amr::initialInit() 1 1.421e-06 1.704e-06 2.088e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.36 3.361 3.361 100.00% Amr::coarseTimeStep() 10 3.071 3.071 3.071 91.37% Amr::timeStep() 10 3.061 3.062 3.063 91.11% Castro::advance() 10 3.047 3.047 3.048 90.66% Castro::subcycle_advance_ctu() 10 2.971 2.975 2.984 88.78% Castro::do_advance_ctu() 10 2.971 2.975 2.984 88.78% Castro::construct_ctu_hydro_source() 10 2.095 2.139 2.173 64.66% Gravity::make_radial_gravity() 21 0.3544 0.3612 0.381 11.33% Amr::init() 1 0.2468 0.247 0.2472 7.35% Castro::construct_old_gravity() 10 0.2108 0.2166 0.2335 6.95% Gravity::get_old_grav_vector() 10 0.2099 0.2158 0.2329 6.93% Gravity::get_new_grav_vector() 11 0.2299 0.2312 0.2327 6.92% Amr::initialInit() 1 0.2305 0.231 0.2316 6.89% Castro::construct_new_gravity() 10 0.1924 0.1934 0.1944 5.78% Amr::InitializeInit() 1 0.05383 0.1318 0.1888 5.62% Amr::defBaseLevel() 1 0.05383 0.1318 0.1888 5.62% FillPatchIterator::Initialize 41 0.1591 0.1662 0.1804 5.37% Amr::FinalizeInit() 1 0.04187 0.09925 0.1769 5.26% Castro::initData() 1 0.04151 0.1146 0.1705 5.07% Castro::estTimeStep() 21 0.01879 0.08056 0.1617 4.81% Castro::initialize_do_advance() 10 0.1498 0.1539 0.158 4.70% FillPatchSingleLevel 41 0.1165 0.1278 0.1494 4.44% Castro::computeInitialDt() 2 0.002458 0.05957 0.1377 4.10% Castro::clean_state() 62 0.1021 0.1092 0.1133 3.37% Castro::expand_state() 10 0.1045 0.1086 0.1115 3.32% FabArray::ParallelCopy() 41 0.07296 0.08478 0.1101 3.28% MultiFab::min() 10 0.02588 0.06491 0.1079 3.21% FabArray::ParallelCopy_finish() 41 0.03299 0.04562 0.07622 2.27% Castro::initialize_advance() 10 0.06284 0.07242 0.076 2.26% Castro::computeTemp() 63 0.06406 0.07026 0.07368 2.19% FabArray::setVal() 139 0.0609 0.06896 0.07362 2.19% Castro::do_new_sources() 10 0.05608 0.06105 0.06618 1.97% Amr::writePlotFile() 2 0.05378 0.05432 0.05493 1.63% Castro::reset_internal_energy() 63 0.04671 0.05101 0.05346 1.59% Castro::do_old_sources() 10 0.03969 0.04557 0.04854 1.44% StateDataPhysBCFunct::() 41 0.0392 0.04299 0.04547 1.35% StateData::FillBoundary(geom) 41 0.03908 0.04287 0.04533 1.35% FabArray::ParallelCopy_nowait() 41 0.03382 0.03909 0.04114 1.22% Castro::post_init() 1 0.0382 0.03874 0.03912 1.16% Castro::normalize_species() 62 0.03275 0.03398 0.03485 1.04% Castro::construct_new_source() 50 0.02617 0.02992 0.0336 1.00% Gravity::interpolate_monopole_grav() 21 0.02785 0.02877 0.02951 0.88% Castro::construct_new_gravity_source() 10 0.0205 0.02351 0.02673 0.80% Castro::apply_source_to_state() 20 0.01316 0.01497 0.01649 0.49% MultiFab::Saxpy() 20 0.01309 0.01491 0.01643 0.49% VisMF::Write(FabArray) 2 0.01175 0.01278 0.0155 0.46% Castro::post_timestep() 10 0.01367 0.0142 0.01484 0.44% Castro::check_for_nan() 20 0.01025 0.01115 0.01215 0.36% MultiFab::contains_nan() 20 0.01022 0.01112 0.01212 0.36% Castro::construct_old_source() 50 0.007261 0.0108 0.01179 0.35% Castro::construct_old_gravity_source() 10 0.007199 0.01072 0.01171 0.35% FabArray::setDomainBndry() 41 0.007024 0.0091 0.01044 0.31% Castro::computeNewDt() 9 0.006883 0.007591 0.008188 0.24% Castro::enforce_min_density() 62 0.005868 0.006256 0.006634 0.20% AmrLevel::AmrLevel(dm) 1 0.004273 0.005794 0.006259 0.19% StateData::define() 4 0.004265 0.005783 0.006249 0.19% Castro::swap_state_time_levels() 10 0.003025 0.004093 0.005245 0.16% Castro::post_regrid() 1 0.001417 0.002253 0.002617 0.08% Castro::finalize_do_advance() 10 0.0004631 0.0007853 0.0009143 0.03% Amr::InitAmr() 1 0.0002834 0.0004248 0.0005802 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.276e-05 0.0001908 0.0003643 0.01% DistributionMapping::LeastUsedCPUs() 1 7.375e-06 0.0001841 0.0003582 0.01% Castro::enforce_consistent_e() 1 7.864e-05 0.0001268 0.0001656 0.00% FabArrayBase::getCPC() 41 7.519e-05 8.615e-05 9.863e-05 0.00% Castro::finalize_advance() 10 5.671e-05 6.376e-05 7.917e-05 0.00% Amr::writeSmallPlotFile() 1 2.595e-05 6.033e-05 7.166e-05 0.00% FabArrayBase::CPC::define() 2 2.723e-05 3.303e-05 3.86e-05 0.00% Castro::enforce_speed_limit() 62 2.534e-05 3.141e-05 3.628e-05 0.00% Castro::create_source_corrector() 10 1.439e-05 1.722e-05 2.25e-05 0.00% Gravity::swapTimeLevels() 10 1.219e-05 1.477e-05 2.093e-05 0.00% Amr::initSubcycle() 1 9.131e-06 1.313e-05 1.486e-05 0.00% Gravity::set_mass_offset() 10 7.094e-06 9.205e-06 1.311e-05 0.00% Castro::FluxRegFineAdd() 10 5.61e-06 6.318e-06 6.873e-06 0.00% Castro::retry_advance_ctu() 10 5.242e-06 5.758e-06 6.732e-06 0.00% DistributionMapping::Distribute() 1 1.146e-06 1.807e-06 5.469e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.01-32-g12548009735e) finalized