MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.01-33-gb7050b410812) initialized Starting run at 06:31:09 UTC on 2022-01-20. Successfully read inputs file ... Castro git describe: 21.12-27-g958e0cc7a AMReX git describe: 22.01-33-gb7050b410 Microphysics git describe: 22.01-20-g1a290c72 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013087059 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.340140525 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.344307487 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.313705888 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.315866258 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.316216333 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.341685281 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.299573779 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.291360182 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.292062816 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.29072761 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009859618 seconds Ending run at 06:31:12 UTC on 2022-01-20. Run time = 3.338685571 Run time without initialization = 3.159233357 Average number of zones advanced per microsecond: 0.830 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.338 ... 3.338 ... 3.339 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1396 2.1813 2.2329 66.88% Gravity::make_radial_gravity() 21 0.3428 0.3511 0.3569 10.69% MultiFab::min() 10 0.0215 0.07657 0.1178 3.53% Castro::initData() 1 0.03858 0.08031 0.1177 3.53% Castro::estTimeStep() 21 0.01977 0.0601 0.1063 3.18% FabArray::setVal() 139 0.069 0.07386 0.07899 2.37% Castro::reset_internal_energy() 63 0.04891 0.05031 0.05225 1.57% FabArray::ParallelCopy_finish() 41 0.0335 0.04062 0.04998 1.50% StateData::FillBoundary(geom) 41 0.03901 0.04222 0.04642 1.39% FabArray::ParallelCopy_nowait() 41 0.04069 0.04245 0.04487 1.34% FillPatchIterator::Initialize 41 0.02464 0.03194 0.03505 1.05% Castro::normalize_species() 62 0.03236 0.03342 0.0339 1.02% Gravity::interpolate_monopole_grav() 21 0.02776 0.02837 0.02902 0.87% Castro::construct_new_gravity_source() 10 0.0229 0.02481 0.02689 0.81% Castro::do_advance_ctu() 10 0.01867 0.02121 0.02433 0.73% Castro::expand_state() 10 0.01562 0.02046 0.02255 0.68% Castro::computeTemp() 63 0.01793 0.01897 0.01939 0.58% Castro::initialize_do_advance() 10 0.01629 0.01775 0.01929 0.58% MultiFab::Saxpy() 20 0.01459 0.01598 0.01739 0.52% VisMF::Write(FabArray) 2 0.01198 0.01248 0.01475 0.44% Castro::initialize_advance() 10 0.01072 0.01255 0.0147 0.44% Gravity::get_new_grav_vector() 11 0.01038 0.01153 0.0131 0.39% MultiFab::contains_nan() 20 0.01074 0.01171 0.01267 0.38% Castro::construct_old_gravity_source() 10 0.01115 0.01167 0.01227 0.37% FabArray::setDomainBndry() 41 0.007921 0.01059 0.01201 0.36% Amr::writePlotFile() 2 0.008438 0.01065 0.01116 0.33% Gravity::get_old_grav_vector() 10 0.008117 0.00937 0.01066 0.32% Amr::defBaseLevel() 1 0.006668 0.007174 0.008732 0.26% Castro::construct_new_source() 50 0.006399 0.006697 0.006948 0.21% Castro::enforce_min_density() 62 0.005935 0.006379 0.00668 0.20% StateData::define() 4 0.00434 0.004652 0.005116 0.15% Castro::swap_state_time_levels() 10 0.002966 0.00388 0.004294 0.13% main() 1 0.003114 0.003643 0.003942 0.12% Castro::finalize_do_advance() 10 0.000828 0.001059 0.00122 0.04% Amr::coarseTimeStep() 10 0.000375 0.000576 0.0009851 0.03% Amr::timeStep() 10 0.0001833 0.000234 0.0004674 0.01% Amr::InitAmr() 1 0.0002711 0.0003105 0.0004054 0.01% DistributionMapping::LeastUsedCPUs() 1 9.307e-06 0.0001344 0.0001817 0.01% Castro::clean_state() 62 0.0001363 0.000145 0.0001569 0.00% StateDataPhysBCFunct::() 41 0.0001049 0.0001135 0.0001226 0.00% Castro::construct_old_source() 50 5.701e-05 8.482e-05 0.0001041 0.00% Amr::FinalizeInit() 1 3.554e-06 1.685e-05 0.000102 0.00% Castro::enforce_consistent_e() 1 8.188e-05 8.994e-05 0.0001005 0.00% Castro::do_old_sources() 10 5.856e-05 6.788e-05 8.495e-05 0.00% FillPatchSingleLevel 41 6.145e-05 7.149e-05 7.958e-05 0.00% FabArray::ParallelCopy() 41 6.194e-05 6.966e-05 7.724e-05 0.00% Castro::do_new_sources() 10 5.954e-05 6.715e-05 7.669e-05 0.00% Amr::writeSmallPlotFile() 1 4.732e-05 6.016e-05 7.194e-05 0.00% Castro::apply_source_to_state() 20 4.245e-05 5.55e-05 6.996e-05 0.00% Castro::construct_old_gravity() 10 5.323e-05 5.942e-05 6.588e-05 0.00% Castro::subcycle_advance_ctu() 10 3.928e-05 4.826e-05 6.268e-05 0.00% FabArrayBase::getCPC() 41 4.632e-05 5.531e-05 6.257e-05 0.00% Castro::advance() 10 3.581e-05 4.257e-05 5.991e-05 0.00% Castro::construct_new_gravity() 10 4.151e-05 4.961e-05 5.909e-05 0.00% Castro::finalize_advance() 10 4.866e-05 5.169e-05 5.577e-05 0.00% Castro::enforce_speed_limit() 62 2.534e-05 2.86e-05 3.486e-05 0.00% FabArrayBase::CPC::define() 2 2.373e-05 2.692e-05 3.386e-05 0.00% Castro::check_for_nan() 20 2.165e-05 2.604e-05 3.036e-05 0.00% Castro::create_source_corrector() 10 1.55e-05 1.776e-05 2.313e-05 0.00% Amr::initSubcycle() 1 8.549e-06 1.064e-05 1.679e-05 0.00% Gravity::swapTimeLevels() 10 1.079e-05 1.431e-05 1.646e-05 0.00% Gravity::set_mass_offset() 10 7.462e-06 8.396e-06 1.154e-05 0.00% Castro::post_timestep() 10 7.701e-06 9.464e-06 1.11e-05 0.00% Castro::post_init() 1 2.591e-06 5.694e-06 1.076e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.408e-06 8.329e-06 1.002e-05 0.00% Castro::computeNewDt() 9 7.77e-06 8.394e-06 9.988e-06 0.00% Castro::FluxRegFineAdd() 10 5.558e-06 6.499e-06 8.483e-06 0.00% Castro::retry_advance_ctu() 10 4.651e-06 5.489e-06 6.22e-06 0.00% Amr::InitializeInit() 1 2.038e-06 2.804e-06 5.415e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.912e-06 4.474e-06 5.165e-06 0.00% Castro::post_regrid() 1 1.761e-06 3.262e-06 4.959e-06 0.00% Castro::computeInitialDt() 2 3.144e-06 3.757e-06 4.509e-06 0.00% Amr::init() 1 1.877e-06 2.262e-06 2.533e-06 0.00% Amr::initialInit() 1 1.179e-06 1.844e-06 2.441e-06 0.00% DistributionMapping::Distribute() 1 9.96e-07 1.14e-06 1.527e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.338 3.338 3.339 100.00% Amr::coarseTimeStep() 10 3.145 3.146 3.146 94.21% Amr::timeStep() 10 3.136 3.136 3.137 93.96% Castro::advance() 10 3.121 3.122 3.122 93.50% Castro::subcycle_advance_ctu() 10 3.043 3.046 3.049 91.33% Castro::do_advance_ctu() 10 3.043 3.046 3.049 91.33% Castro::construct_ctu_hydro_source() 10 2.14 2.181 2.233 66.88% Gravity::make_radial_gravity() 21 0.3428 0.3511 0.3569 10.69% Gravity::get_new_grav_vector() 11 0.2279 0.2301 0.2312 6.92% Castro::construct_old_gravity() 10 0.2042 0.2088 0.2135 6.39% Gravity::get_old_grav_vector() 10 0.2033 0.208 0.2127 6.37% Castro::construct_new_gravity() 10 0.2022 0.2038 0.2053 6.15% Amr::init() 1 0.1789 0.179 0.179 5.36% FillPatchIterator::Initialize 41 0.1628 0.1682 0.1715 5.14% Amr::initialInit() 1 0.1655 0.1658 0.166 4.97% Castro::initialize_do_advance() 10 0.1522 0.1588 0.1633 4.89% Amr::InitializeInit() 1 0.0563 0.0986 0.1361 4.08% Amr::defBaseLevel() 1 0.05629 0.09859 0.1361 4.08% FillPatchSingleLevel 41 0.1217 0.1256 0.1321 3.96% Castro::initData() 1 0.04277 0.08423 0.1215 3.64% MultiFab::min() 10 0.0215 0.07657 0.1178 3.53% Castro::expand_state() 10 0.1055 0.1118 0.1157 3.46% Castro::clean_state() 62 0.1056 0.1083 0.1111 3.33% Amr::FinalizeInit() 1 0.02963 0.06719 0.1096 3.28% Castro::estTimeStep() 21 0.01977 0.0601 0.1063 3.18% FabArray::ParallelCopy() 41 0.07817 0.08322 0.09083 2.72% Castro::computeInitialDt() 2 0.001723 0.03925 0.08159 2.44% FabArray::setVal() 139 0.069 0.07386 0.07899 2.37% Castro::initialize_advance() 10 0.07224 0.07552 0.07816 2.34% Castro::computeTemp() 63 0.06686 0.06928 0.0714 2.14% Castro::do_new_sources() 10 0.06009 0.06408 0.06859 2.05% Castro::reset_internal_energy() 63 0.04891 0.05031 0.05225 1.57% FabArray::ParallelCopy_finish() 41 0.0335 0.04062 0.04998 1.50% Castro::do_old_sources() 10 0.04731 0.04764 0.04833 1.45% StateDataPhysBCFunct::() 41 0.03912 0.04234 0.04654 1.39% StateData::FillBoundary(geom) 41 0.03901 0.04222 0.04642 1.39% FabArray::ParallelCopy_nowait() 41 0.04077 0.04253 0.04496 1.35% Castro::normalize_species() 62 0.03236 0.03342 0.0339 1.02% Castro::construct_new_source() 50 0.0293 0.03151 0.03378 1.01% Gravity::interpolate_monopole_grav() 21 0.02776 0.02837 0.02902 0.87% Castro::post_init() 1 0.02709 0.02732 0.02744 0.82% Castro::construct_new_gravity_source() 10 0.0229 0.02481 0.02689 0.81% Amr::writePlotFile() 2 0.0229 0.02313 0.02334 0.70% Castro::apply_source_to_state() 20 0.01463 0.01603 0.01745 0.52% MultiFab::Saxpy() 20 0.01459 0.01598 0.01739 0.52% Castro::post_timestep() 10 0.01398 0.01446 0.0149 0.45% VisMF::Write(FabArray) 2 0.01198 0.01248 0.01475 0.44% Castro::check_for_nan() 20 0.01076 0.01174 0.0127 0.38% MultiFab::contains_nan() 20 0.01074 0.01171 0.01267 0.38% Castro::construct_old_source() 50 0.01121 0.01176 0.01237 0.37% Castro::construct_old_gravity_source() 10 0.01115 0.01167 0.01227 0.37% FabArray::setDomainBndry() 41 0.007921 0.01059 0.01201 0.36% Castro::computeNewDt() 9 0.006975 0.007613 0.008156 0.24% Castro::enforce_min_density() 62 0.005935 0.006379 0.00668 0.20% AmrLevel::AmrLevel(dm) 1 0.004349 0.00466 0.005125 0.15% StateData::define() 4 0.00434 0.004652 0.005116 0.15% Castro::swap_state_time_levels() 10 0.002966 0.00388 0.004294 0.13% Castro::post_regrid() 1 0.001455 0.001541 0.001703 0.05% Castro::finalize_do_advance() 10 0.000828 0.001059 0.00122 0.04% Amr::InitAmr() 1 0.0002816 0.0003211 0.000414 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.58e-05 0.00014 0.0001881 0.01% DistributionMapping::LeastUsedCPUs() 1 9.307e-06 0.0001344 0.0001817 0.01% Castro::enforce_consistent_e() 1 8.188e-05 8.994e-05 0.0001005 0.00% FabArrayBase::getCPC() 41 7.354e-05 8.223e-05 9.01e-05 0.00% Amr::writeSmallPlotFile() 1 4.732e-05 6.016e-05 7.194e-05 0.00% Castro::finalize_advance() 10 5.432e-05 5.819e-05 6.425e-05 0.00% Castro::enforce_speed_limit() 62 2.534e-05 2.86e-05 3.486e-05 0.00% FabArrayBase::CPC::define() 2 2.373e-05 2.692e-05 3.386e-05 0.00% Castro::create_source_corrector() 10 1.55e-05 1.776e-05 2.313e-05 0.00% Amr::initSubcycle() 1 8.549e-06 1.064e-05 1.679e-05 0.00% Gravity::swapTimeLevels() 10 1.079e-05 1.431e-05 1.646e-05 0.00% Gravity::set_mass_offset() 10 7.462e-06 8.396e-06 1.154e-05 0.00% Castro::FluxRegFineAdd() 10 5.558e-06 6.499e-06 8.483e-06 0.00% Castro::retry_advance_ctu() 10 4.651e-06 5.489e-06 6.22e-06 0.00% DistributionMapping::Distribute() 1 9.96e-07 1.14e-06 1.527e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.01-33-gb7050b410812) finalized