MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.01-35-ge3b1468b8f16) initialized Starting run at 06:31:10 UTC on 2022-01-21. Successfully read inputs file ... Castro git describe: 21.12-27-g958e0cc7a AMReX git describe: 22.01-35-ge3b1468b8 Microphysics git describe: 22.01-20-g1a290c72 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012203895 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.334252748 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.333494706 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.313095361 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.311529213 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.311699679 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.335923684 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.299105013 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.288963132 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.288895897 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.289249779 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.045822326 seconds Ending run at 06:31:13 UTC on 2022-01-21. Run time = 3.338583817 Run time without initialization = 3.155818479 Average number of zones advanced per microsecond: 0.831 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.338 ... 3.338 ... 3.339 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1060 2.1677 2.2099 66.19% Gravity::make_radial_gravity() 21 0.3343 0.3487 0.3727 11.16% MultiFab::min() 10 0.02417 0.06951 0.1338 4.01% Castro::initData() 1 0.0395 0.08589 0.1253 3.75% Castro::estTimeStep() 21 0.01841 0.06303 0.1043 3.12% FabArray::ParallelCopy_finish() 41 0.03197 0.04417 0.09074 2.72% FabArray::setVal() 139 0.05269 0.06677 0.07315 2.19% Castro::reset_internal_energy() 63 0.04797 0.04978 0.0521 1.56% Amr::writePlotFile() 2 0.04398 0.04628 0.04778 1.43% StateData::FillBoundary(geom) 41 0.03828 0.04177 0.04609 1.38% FabArray::ParallelCopy_nowait() 41 0.03304 0.04078 0.0435 1.30% Castro::normalize_species() 62 0.03211 0.03337 0.03598 1.08% FillPatchIterator::Initialize 41 0.02249 0.0303 0.03294 0.99% Gravity::interpolate_monopole_grav() 21 0.02765 0.02809 0.02859 0.86% Castro::construct_new_gravity_source() 10 0.01986 0.02348 0.0259 0.78% Castro::do_advance_ctu() 10 0.01427 0.0194 0.02384 0.71% Castro::expand_state() 10 0.01142 0.01874 0.02126 0.64% Castro::computeTemp() 63 0.01759 0.01858 0.01959 0.59% Castro::initialize_do_advance() 10 0.01 0.01601 0.01749 0.52% MultiFab::Saxpy() 20 0.01281 0.01488 0.01606 0.48% VisMF::Write(FabArray) 2 0.01099 0.01216 0.01427 0.43% Castro::initialize_advance() 10 0.003861 0.01027 0.0132 0.40% Gravity::get_new_grav_vector() 11 0.009519 0.01086 0.01298 0.39% MultiFab::contains_nan() 20 0.01015 0.01124 0.01295 0.39% Castro::construct_old_gravity_source() 10 0.007222 0.01112 0.0122 0.37% FabArray::setDomainBndry() 41 0.006465 0.01024 0.01168 0.35% Amr::defBaseLevel() 1 0.006633 0.007852 0.01058 0.32% Gravity::get_old_grav_vector() 10 0.00692 0.008978 0.01035 0.31% Castro::enforce_min_density() 62 0.005646 0.00613 0.006674 0.20% Castro::construct_new_source() 50 0.00555 0.006344 0.006665 0.20% StateData::define() 4 0.004331 0.004988 0.006449 0.19% main() 1 0.003097 0.003769 0.004045 0.12% Castro::swap_state_time_levels() 10 0.002447 0.003469 0.003795 0.11% Amr::coarseTimeStep() 10 0.0003162 0.000791 0.001395 0.04% Castro::finalize_do_advance() 10 0.0004674 0.0009774 0.001173 0.04% Amr::timeStep() 10 0.0001582 0.0002265 0.0004658 0.01% Amr::InitAmr() 1 0.0002837 0.000342 0.0004551 0.01% DistributionMapping::LeastUsedCPUs() 1 6.997e-06 0.000149 0.0002133 0.01% Castro::clean_state() 62 0.0001241 0.0001348 0.000143 0.00% Castro::enforce_consistent_e() 1 7.55e-05 9.676e-05 0.0001378 0.00% StateDataPhysBCFunct::() 41 9.098e-05 0.0001146 0.0001292 0.00% Castro::construct_old_source() 50 4.142e-05 7.318e-05 9.957e-05 0.00% Amr::FinalizeInit() 1 3.966e-06 1.497e-05 8.678e-05 0.00% FillPatchSingleLevel 41 5.842e-05 6.748e-05 7.564e-05 0.00% FabArray::ParallelCopy() 41 5.39e-05 6.415e-05 7.208e-05 0.00% Castro::finalize_advance() 10 5.049e-05 5.789e-05 7.004e-05 0.00% Castro::do_old_sources() 10 4.185e-05 5.578e-05 6.604e-05 0.00% Castro::do_new_sources() 10 4.936e-05 5.567e-05 6.347e-05 0.00% Amr::writeSmallPlotFile() 1 2.649e-05 4.914e-05 6.307e-05 0.00% Castro::advance() 10 3.096e-05 3.798e-05 6.101e-05 0.00% FabArrayBase::getCPC() 41 3.856e-05 4.803e-05 5.908e-05 0.00% Castro::construct_old_gravity() 10 4.231e-05 4.951e-05 5.471e-05 0.00% Castro::subcycle_advance_ctu() 10 3.61e-05 4.271e-05 5.405e-05 0.00% Castro::apply_source_to_state() 20 3.903e-05 4.626e-05 5.109e-05 0.00% Castro::construct_new_gravity() 10 4.156e-05 4.448e-05 5.066e-05 0.00% FabArrayBase::CPC::define() 2 2.286e-05 2.644e-05 3.32e-05 0.00% Castro::enforce_speed_limit() 62 2.362e-05 2.789e-05 3.2e-05 0.00% Castro::check_for_nan() 20 2.143e-05 2.388e-05 2.605e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.752e-06 1.154e-05 2.386e-05 0.00% Castro::create_source_corrector() 10 1.342e-05 1.607e-05 1.838e-05 0.00% Castro::post_timestep() 10 8.309e-06 1.058e-05 1.669e-05 0.00% Amr::initSubcycle() 1 8.828e-06 1.094e-05 1.514e-05 0.00% Gravity::swapTimeLevels() 10 7.746e-06 1.18e-05 1.477e-05 0.00% Castro::computeNewDt() 9 7.502e-06 8.799e-06 1.319e-05 0.00% Gravity::set_mass_offset() 10 6.833e-06 7.937e-06 9.344e-06 0.00% Castro::post_init() 1 3.077e-06 4.606e-06 9.237e-06 0.00% Amr::InitializeInit() 1 2.121e-06 3.135e-06 6.942e-06 0.00% Castro::retry_advance_ctu() 10 5.108e-06 5.9e-06 6.819e-06 0.00% Castro::FluxRegFineAdd() 10 5.331e-06 6.035e-06 6.754e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.926e-06 5.066e-06 6.635e-06 0.00% Castro::computeInitialDt() 2 3.024e-06 4.032e-06 5.443e-06 0.00% Castro::post_regrid() 1 1.748e-06 3.369e-06 4.92e-06 0.00% Amr::init() 1 2.033e-06 2.307e-06 2.783e-06 0.00% Amr::initialInit() 1 1.269e-06 1.578e-06 2.052e-06 0.00% DistributionMapping::Distribute() 1 1.012e-06 1.191e-06 1.417e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.338 3.338 3.339 100.00% Amr::coarseTimeStep() 10 3.106 3.106 3.106 93.03% Amr::timeStep() 10 3.096 3.097 3.098 92.78% Castro::advance() 10 3.082 3.082 3.082 92.33% Castro::subcycle_advance_ctu() 10 3.01 3.015 3.032 90.83% Castro::do_advance_ctu() 10 3.01 3.014 3.032 90.83% Castro::construct_ctu_hydro_source() 10 2.106 2.168 2.21 66.19% Gravity::make_radial_gravity() 21 0.3343 0.3487 0.3727 11.16% Castro::construct_old_gravity() 10 0.1995 0.2103 0.2313 6.93% Gravity::get_old_grav_vector() 10 0.1986 0.2095 0.2307 6.91% Gravity::get_new_grav_vector() 11 0.2224 0.2235 0.2243 6.72% Castro::construct_new_gravity() 10 0.1998 0.2002 0.2005 6.01% FillPatchIterator::Initialize 41 0.1589 0.1676 0.1913 5.73% Amr::init() 1 0.1821 0.1823 0.1823 5.46% Amr::initialInit() 1 0.1694 0.1697 0.1699 5.09% FillPatchSingleLevel 41 0.1159 0.127 0.1624 4.86% Castro::initialize_do_advance() 10 0.1505 0.1553 0.1595 4.78% Amr::InitializeInit() 1 0.05642 0.1049 0.1434 4.29% Amr::defBaseLevel() 1 0.05642 0.1049 0.1434 4.29% MultiFab::min() 10 0.02417 0.06951 0.1338 4.01% Castro::initData() 1 0.04325 0.08993 0.1287 3.86% FabArray::ParallelCopy() 41 0.07408 0.0851 0.1239 3.71% Castro::expand_state() 10 0.1034 0.1108 0.1206 3.61% Amr::FinalizeInit() 1 0.02642 0.06483 0.1134 3.40% Castro::clean_state() 62 0.1039 0.107 0.1124 3.37% Castro::estTimeStep() 21 0.01841 0.06303 0.1043 3.12% FabArray::ParallelCopy_finish() 41 0.03197 0.04417 0.09074 2.72% Castro::computeInitialDt() 2 0.001595 0.04006 0.08848 2.65% FabArray::setVal() 139 0.05269 0.06677 0.07315 2.19% Castro::initialize_advance() 10 0.04914 0.06758 0.07254 2.17% Castro::computeTemp() 63 0.06557 0.06835 0.07146 2.14% Castro::do_new_sources() 10 0.05455 0.06125 0.06717 2.01% Amr::writePlotFile() 2 0.05825 0.05844 0.05877 1.76% Castro::reset_internal_energy() 63 0.04797 0.04978 0.0521 1.56% Castro::do_old_sources() 10 0.03935 0.04578 0.04733 1.42% StateDataPhysBCFunct::() 41 0.03839 0.04189 0.0462 1.38% StateData::FillBoundary(geom) 41 0.03828 0.04177 0.04609 1.38% FabArray::ParallelCopy_nowait() 41 0.03312 0.04086 0.04357 1.30% Castro::normalize_species() 62 0.03211 0.03337 0.03598 1.08% Castro::construct_new_source() 50 0.02541 0.02982 0.03247 0.97% Gravity::interpolate_monopole_grav() 21 0.02765 0.02809 0.02859 0.86% Castro::construct_new_gravity_source() 10 0.01986 0.02348 0.0259 0.78% Castro::post_init() 1 0.02401 0.02424 0.02436 0.73% Castro::apply_source_to_state() 20 0.01286 0.01492 0.01611 0.48% MultiFab::Saxpy() 20 0.01281 0.01488 0.01606 0.48% Castro::post_timestep() 10 0.01389 0.01422 0.01501 0.45% VisMF::Write(FabArray) 2 0.01099 0.01216 0.01427 0.43% Castro::check_for_nan() 20 0.01017 0.01127 0.01298 0.39% MultiFab::contains_nan() 20 0.01015 0.01124 0.01295 0.39% Castro::construct_old_source() 50 0.007263 0.0112 0.0123 0.37% Castro::construct_old_gravity_source() 10 0.007222 0.01112 0.0122 0.37% FabArray::setDomainBndry() 41 0.006465 0.01024 0.01168 0.35% Castro::computeNewDt() 9 0.006844 0.007653 0.008239 0.25% Castro::enforce_min_density() 62 0.005646 0.00613 0.006674 0.20% AmrLevel::AmrLevel(dm) 1 0.00434 0.005 0.006459 0.19% StateData::define() 4 0.004331 0.004988 0.006449 0.19% Castro::swap_state_time_levels() 10 0.002447 0.003469 0.003795 0.11% Castro::post_regrid() 1 0.001325 0.00141 0.001475 0.04% Castro::finalize_do_advance() 10 0.0004674 0.0009774 0.001173 0.04% Amr::InitAmr() 1 0.0002931 0.000353 0.00047 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.249e-05 0.0001553 0.0002213 0.01% DistributionMapping::LeastUsedCPUs() 1 6.997e-06 0.000149 0.0002133 0.01% Castro::enforce_consistent_e() 1 7.55e-05 9.676e-05 0.0001378 0.00% FabArrayBase::getCPC() 41 6.357e-05 7.447e-05 8.64e-05 0.00% Castro::finalize_advance() 10 5.593e-05 6.393e-05 7.646e-05 0.00% Amr::writeSmallPlotFile() 1 2.649e-05 4.914e-05 6.307e-05 0.00% FabArrayBase::CPC::define() 2 2.286e-05 2.644e-05 3.32e-05 0.00% Castro::enforce_speed_limit() 62 2.362e-05 2.789e-05 3.2e-05 0.00% Castro::create_source_corrector() 10 1.342e-05 1.607e-05 1.838e-05 0.00% Amr::initSubcycle() 1 8.828e-06 1.094e-05 1.514e-05 0.00% Gravity::swapTimeLevels() 10 7.746e-06 1.18e-05 1.477e-05 0.00% Gravity::set_mass_offset() 10 6.833e-06 7.937e-06 9.344e-06 0.00% Castro::retry_advance_ctu() 10 5.108e-06 5.9e-06 6.819e-06 0.00% Castro::FluxRegFineAdd() 10 5.331e-06 6.035e-06 6.754e-06 0.00% DistributionMapping::Distribute() 1 1.012e-06 1.191e-06 1.417e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.01-35-ge3b1468b8f16) finalized