MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.01-39-g874ccc6f3f8d) initialized Starting run at 06:31:09 UTC on 2022-01-27. Successfully read inputs file ... Castro git describe: 21.12-27-g958e0cc7a AMReX git describe: 22.01-39-g874ccc6f3 Microphysics git describe: 22.01-20-g1a290c72 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015442673 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.359916505 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.32879828 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.332532608 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.313316498 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.313387477 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.341735652 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.299622695 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.291419796 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.291781125 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.289388846 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009319577 seconds Ending run at 06:31:12 UTC on 2022-01-27. Run time = 3.36197388 Run time without initialization = 3.174615723 Average number of zones advanced per microsecond: 0.826 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.362 ... 3.362 ... 3.362 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1313 2.1927 2.2409 66.65% Gravity::make_radial_gravity() 21 0.3597 0.3717 0.3841 11.43% MultiFab::min() 10 0.02111 0.07282 0.1371 4.08% Castro::initData() 1 0.06531 0.08326 0.112 3.33% FabArray::setVal() 139 0.06873 0.07222 0.07677 2.28% Castro::estTimeStep() 21 0.01724 0.04941 0.07478 2.22% FabArray::ParallelCopy_finish() 41 0.03697 0.04434 0.06047 1.80% Castro::reset_internal_energy() 63 0.04974 0.05078 0.0522 1.55% StateData::FillBoundary(geom) 41 0.04071 0.04308 0.04634 1.38% FabArray::ParallelCopy_nowait() 41 0.04026 0.04197 0.0436 1.30% FillPatchIterator::Initialize 41 0.02394 0.03181 0.03664 1.09% Castro::normalize_species() 62 0.03237 0.03345 0.03536 1.05% Gravity::interpolate_monopole_grav() 21 0.02782 0.02845 0.02952 0.88% Castro::construct_new_gravity_source() 10 0.02302 0.02471 0.02684 0.80% Castro::do_advance_ctu() 10 0.01657 0.0208 0.02408 0.72% Castro::expand_state() 10 0.0144 0.01855 0.02101 0.63% Castro::computeTemp() 63 0.01831 0.01907 0.02032 0.60% Castro::initialize_do_advance() 10 0.01238 0.01693 0.01943 0.58% MultiFab::Saxpy() 20 0.01506 0.01592 0.01654 0.49% VisMF::Write(FabArray) 2 0.01123 0.01196 0.01505 0.45% Amr::writePlotFile() 2 0.009963 0.01374 0.01483 0.44% Castro::initialize_advance() 10 0.01049 0.01251 0.01464 0.44% Gravity::get_new_grav_vector() 11 0.01025 0.01147 0.01299 0.39% MultiFab::contains_nan() 20 0.0107 0.01154 0.01253 0.37% Castro::construct_old_gravity_source() 10 0.009869 0.01155 0.01226 0.36% FabArray::setDomainBndry() 41 0.007677 0.01039 0.01161 0.35% Amr::defBaseLevel() 1 0.006669 0.007816 0.01073 0.32% Gravity::get_old_grav_vector() 10 0.008227 0.009212 0.01046 0.31% Castro::construct_new_source() 50 0.006441 0.006709 0.006949 0.21% Castro::enforce_min_density() 62 0.005953 0.006263 0.006785 0.20% StateData::define() 4 0.00433 0.004931 0.006448 0.19% Castro::swap_state_time_levels() 10 0.003568 0.003903 0.005125 0.15% main() 1 0.003725 0.003928 0.004091 0.12% Castro::finalize_do_advance() 10 0.0008379 0.001142 0.001326 0.04% Amr::coarseTimeStep() 10 0.0003165 0.0006499 0.001266 0.04% Amr::InitAmr() 1 0.0002828 0.0003465 0.0005972 0.02% Amr::timeStep() 10 0.0001732 0.0002272 0.0004474 0.01% DistributionMapping::LeastUsedCPUs() 1 9.993e-06 0.0002919 0.000356 0.01% Castro::enforce_consistent_e() 1 8.079e-05 0.0001068 0.0001675 0.00% Castro::clean_state() 62 0.0001197 0.0001382 0.0001562 0.00% StateDataPhysBCFunct::() 41 0.0001047 0.0001209 0.0001357 0.00% Amr::FinalizeInit() 1 3.716e-06 1.871e-05 0.0001141 0.00% Castro::construct_old_source() 50 5.018e-05 7.333e-05 9.359e-05 0.00% FillPatchSingleLevel 41 5.917e-05 7.008e-05 7.93e-05 0.00% Castro::do_new_sources() 10 5.043e-05 6.127e-05 7.544e-05 0.00% Castro::finalize_advance() 10 5.343e-05 5.846e-05 7.422e-05 0.00% Castro::do_old_sources() 10 4.89e-05 6.038e-05 7.407e-05 0.00% Castro::subcycle_advance_ctu() 10 3.839e-05 4.736e-05 7.283e-05 0.00% FabArrayBase::getCPC() 41 4.13e-05 5.062e-05 7.05e-05 0.00% FabArray::ParallelCopy() 41 5.899e-05 6.44e-05 6.897e-05 0.00% Castro::advance() 10 3.004e-05 4.43e-05 6.867e-05 0.00% Amr::writeSmallPlotFile() 1 2.57e-05 4.774e-05 6.621e-05 0.00% Castro::apply_source_to_state() 20 3.843e-05 4.516e-05 5.691e-05 0.00% Castro::construct_old_gravity() 10 4.371e-05 4.998e-05 5.362e-05 0.00% Castro::construct_new_gravity() 10 4.144e-05 4.491e-05 4.97e-05 0.00% Castro::check_for_nan() 20 2.204e-05 2.736e-05 4.08e-05 0.00% FabArrayBase::CPC::define() 2 2.485e-05 2.994e-05 4.03e-05 0.00% Castro::enforce_speed_limit() 62 2.457e-05 2.79e-05 3.773e-05 0.00% Castro::create_source_corrector() 10 1.51e-05 1.749e-05 1.981e-05 0.00% Gravity::swapTimeLevels() 10 1.15e-05 1.346e-05 1.555e-05 0.00% Amr::initSubcycle() 1 8.22e-06 1.045e-05 1.551e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.614e-06 9.423e-06 1.386e-05 0.00% Castro::post_timestep() 10 8.779e-06 9.991e-06 1.205e-05 0.00% Gravity::set_mass_offset() 10 7.171e-06 8.548e-06 1.084e-05 0.00% Amr::InitializeInit() 1 1.97e-06 3.16e-06 9.04e-06 0.00% Castro::computeNewDt() 9 7.355e-06 8.161e-06 8.712e-06 0.00% Castro::FluxRegFineAdd() 10 5.716e-06 6.251e-06 7.329e-06 0.00% Castro::retry_advance_ctu() 10 4.872e-06 5.59e-06 6.678e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.871e-06 5.391e-06 6.174e-06 0.00% Castro::post_init() 1 3.667e-06 4.701e-06 5.971e-06 0.00% Castro::computeInitialDt() 2 3.962e-06 4.801e-06 5.87e-06 0.00% Castro::post_regrid() 1 2.125e-06 3.769e-06 5.398e-06 0.00% Amr::init() 1 2.046e-06 2.664e-06 3.117e-06 0.00% Amr::initialInit() 1 1.243e-06 1.708e-06 2.326e-06 0.00% DistributionMapping::Distribute() 1 1.007e-06 1.248e-06 1.447e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.362 3.362 3.362 100.00% Amr::coarseTimeStep() 10 3.161 3.161 3.161 94.03% Amr::timeStep() 10 3.152 3.152 3.152 93.76% Castro::advance() 10 3.137 3.137 3.138 93.32% Castro::subcycle_advance_ctu() 10 3.06 3.063 3.064 91.15% Castro::do_advance_ctu() 10 3.06 3.063 3.064 91.15% Castro::construct_ctu_hydro_source() 10 2.131 2.193 2.241 66.65% Gravity::make_radial_gravity() 21 0.3597 0.3717 0.3841 11.43% Gravity::get_new_grav_vector() 11 0.2386 0.2394 0.2403 7.15% Castro::construct_old_gravity() 10 0.2102 0.221 0.2314 6.88% Gravity::get_old_grav_vector() 10 0.2094 0.2202 0.2307 6.86% Castro::construct_new_gravity() 10 0.2007 0.202 0.2028 6.03% Amr::init() 1 0.1866 0.1868 0.1869 5.56% FillPatchIterator::Initialize 41 0.1661 0.1719 0.178 5.29% Amr::initialInit() 1 0.1702 0.1705 0.1712 5.09% Castro::initialize_do_advance() 10 0.1531 0.1596 0.1697 5.05% FillPatchSingleLevel 41 0.1216 0.1297 0.1435 4.27% MultiFab::min() 10 0.02111 0.07282 0.1371 4.08% Amr::InitializeInit() 1 0.0828 0.1026 0.1297 3.86% Amr::defBaseLevel() 1 0.0828 0.1026 0.1297 3.86% Castro::expand_state() 10 0.1065 0.1132 0.1201 3.57% Castro::initData() 1 0.06909 0.08746 0.1159 3.45% Castro::clean_state() 62 0.1057 0.1086 0.1125 3.35% FabArray::ParallelCopy() 41 0.07966 0.08646 0.1015 3.02% Amr::FinalizeInit() 1 0.04053 0.06794 0.0877 2.61% FabArray::setVal() 139 0.06873 0.07222 0.07677 2.28% Castro::initialize_advance() 10 0.07293 0.07459 0.07657 2.28% Castro::estTimeStep() 21 0.01724 0.04941 0.07478 2.22% Castro::computeTemp() 63 0.06813 0.06985 0.07217 2.15% Castro::do_new_sources() 10 0.0598 0.06385 0.06814 2.03% FabArray::ParallelCopy_finish() 41 0.03697 0.04434 0.06047 1.80% Castro::reset_internal_energy() 63 0.04974 0.05078 0.0522 1.55% Castro::computeInitialDt() 2 0.002085 0.02918 0.04904 1.46% Castro::do_old_sources() 10 0.04604 0.04743 0.04795 1.43% StateDataPhysBCFunct::() 41 0.04083 0.0432 0.04648 1.38% StateData::FillBoundary(geom) 41 0.04071 0.04308 0.04634 1.38% FabArray::ParallelCopy_nowait() 41 0.04037 0.04205 0.04368 1.30% Castro::post_init() 1 0.03817 0.03843 0.03869 1.15% Castro::normalize_species() 62 0.03237 0.03345 0.03536 1.05% Castro::construct_new_source() 50 0.02969 0.03142 0.03362 1.00% Gravity::interpolate_monopole_grav() 21 0.02782 0.02845 0.02952 0.88% Castro::construct_new_gravity_source() 10 0.02302 0.02471 0.02684 0.80% Amr::writePlotFile() 2 0.02493 0.0257 0.02607 0.78% Castro::apply_source_to_state() 20 0.0151 0.01597 0.01659 0.49% MultiFab::Saxpy() 20 0.01506 0.01592 0.01654 0.49% VisMF::Write(FabArray) 2 0.01123 0.01196 0.01505 0.45% Castro::post_timestep() 10 0.01399 0.01427 0.01476 0.44% Castro::check_for_nan() 20 0.01072 0.01156 0.01255 0.37% MultiFab::contains_nan() 20 0.0107 0.01154 0.01253 0.37% Castro::construct_old_source() 50 0.009919 0.01163 0.01235 0.37% Castro::construct_old_gravity_source() 10 0.009869 0.01155 0.01226 0.36% FabArray::setDomainBndry() 41 0.007677 0.01039 0.01161 0.35% Castro::computeNewDt() 9 0.006786 0.007381 0.007804 0.23% Castro::enforce_min_density() 62 0.005953 0.006263 0.006785 0.20% AmrLevel::AmrLevel(dm) 1 0.00434 0.00494 0.00646 0.19% StateData::define() 4 0.00433 0.004931 0.006448 0.19% Castro::swap_state_time_levels() 10 0.003568 0.003903 0.005125 0.15% Castro::post_regrid() 1 0.001364 0.001706 0.002589 0.08% Castro::finalize_do_advance() 10 0.0008379 0.001142 0.001326 0.04% Amr::InitAmr() 1 0.0002926 0.000357 0.0006127 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.554e-05 0.0002985 0.0003629 0.01% DistributionMapping::LeastUsedCPUs() 1 9.993e-06 0.0002919 0.000356 0.01% Castro::enforce_consistent_e() 1 8.079e-05 0.0001068 0.0001675 0.00% FabArrayBase::getCPC() 41 6.678e-05 8.056e-05 0.0001108 0.00% Castro::finalize_advance() 10 5.995e-05 6.471e-05 8.034e-05 0.00% Amr::writeSmallPlotFile() 1 2.57e-05 4.774e-05 6.621e-05 0.00% FabArrayBase::CPC::define() 2 2.485e-05 2.994e-05 4.03e-05 0.00% Castro::enforce_speed_limit() 62 2.457e-05 2.79e-05 3.773e-05 0.00% Castro::create_source_corrector() 10 1.51e-05 1.749e-05 1.981e-05 0.00% Gravity::swapTimeLevels() 10 1.15e-05 1.346e-05 1.555e-05 0.00% Amr::initSubcycle() 1 8.22e-06 1.045e-05 1.551e-05 0.00% Gravity::set_mass_offset() 10 7.171e-06 8.548e-06 1.084e-05 0.00% Castro::FluxRegFineAdd() 10 5.716e-06 6.251e-06 7.329e-06 0.00% Castro::retry_advance_ctu() 10 4.872e-06 5.59e-06 6.678e-06 0.00% DistributionMapping::Distribute() 1 1.007e-06 1.248e-06 1.447e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.01-39-g874ccc6f3f8d) finalized