MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.01-41-gf7c9c3bd7347) initialized Starting run at 06:31:09 UTC on 2022-01-28. Successfully read inputs file ... Castro git describe: 21.12-27-g958e0cc7a AMReX git describe: 22.01-41-gf7c9c3bd7 Microphysics git describe: 22.01-21-ga8125032 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015708042 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.360311326 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.365200677 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.370453488 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.311523595 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.334648675 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.302418065 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.288478232 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.287925128 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.287550964 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.287421516 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.01021769 seconds Ending run at 06:31:13 UTC on 2022-01-28. Run time = 3.445960093 Run time without initialization = 3.209593556 Average number of zones advanced per microsecond: 0.817 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.446 ... 3.446 ... 3.446 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1204 2.1844 2.2492 65.27% Gravity::make_radial_gravity() 21 0.3517 0.3634 0.3765 10.93% MultiFab::min() 10 0.06948 0.1367 0.2036 5.91% Castro::initData() 1 0.03808 0.08579 0.1546 4.49% Castro::estTimeStep() 21 0.02898 0.09926 0.1526 4.43% FabArray::ParallelCopy_finish() 41 0.03742 0.04971 0.08364 2.43% FabArray::setVal() 139 0.06249 0.06816 0.0765 2.22% Castro::reset_internal_energy() 63 0.04883 0.05055 0.05357 1.55% StateData::FillBoundary(geom) 41 0.03888 0.04156 0.04426 1.28% FabArray::ParallelCopy_nowait() 41 0.03371 0.03936 0.0416 1.21% FillPatchIterator::Initialize 41 0.02328 0.03035 0.03442 1.00% Castro::normalize_species() 62 0.03259 0.03338 0.03414 0.99% Gravity::interpolate_monopole_grav() 21 0.02787 0.02835 0.02917 0.85% Castro::construct_new_gravity_source() 10 0.0214 0.02325 0.02551 0.74% Castro::do_advance_ctu() 10 0.01736 0.02002 0.02367 0.69% Castro::expand_state() 10 0.01154 0.01802 0.02037 0.59% Castro::computeTemp() 63 0.01784 0.01912 0.02018 0.59% Castro::initialize_do_advance() 10 0.01043 0.01646 0.01831 0.53% VisMF::Write(FabArray) 2 0.01264 0.01343 0.01645 0.48% Amr::writePlotFile() 2 0.009772 0.01353 0.01475 0.43% MultiFab::Saxpy() 20 0.01244 0.01389 0.01442 0.42% Gravity::get_new_grav_vector() 11 0.008353 0.01078 0.01303 0.38% Castro::initialize_advance() 10 0.007601 0.01062 0.013 0.38% MultiFab::contains_nan() 20 0.01017 0.01078 0.01189 0.34% FabArray::setDomainBndry() 41 0.0069 0.00974 0.011 0.32% Castro::construct_old_gravity_source() 10 0.007499 0.01027 0.01093 0.32% Amr::defBaseLevel() 1 0.006711 0.007804 0.01079 0.31% Gravity::get_old_grav_vector() 10 0.006598 0.008657 0.009239 0.27% StateData::define() 4 0.004361 0.004939 0.006463 0.19% Castro::construct_new_source() 50 0.005725 0.006171 0.006391 0.19% Castro::enforce_min_density() 62 0.005574 0.00601 0.006295 0.18% Castro::swap_state_time_levels() 10 0.003012 0.003749 0.005296 0.15% main() 1 0.003579 0.003757 0.004083 0.12% Castro::finalize_do_advance() 10 0.0004601 0.0009371 0.001101 0.03% Amr::coarseTimeStep() 10 0.0004045 0.0006318 0.0008841 0.03% Amr::InitAmr() 1 0.0002854 0.0003511 0.0006052 0.02% Amr::timeStep() 10 0.0001669 0.0002358 0.0005175 0.02% DistributionMapping::LeastUsedCPUs() 1 1.128e-05 0.0002977 0.0003649 0.01% Castro::clean_state() 62 0.0001263 0.00014 0.0001715 0.00% Castro::enforce_consistent_e() 1 7.999e-05 9.916e-05 0.0001455 0.00% StateDataPhysBCFunct::() 41 0.0001004 0.000117 0.0001368 0.00% Amr::FinalizeInit() 1 3.745e-06 1.526e-05 8.888e-05 0.00% Castro::construct_old_source() 50 4.68e-05 6.749e-05 8.57e-05 0.00% FillPatchSingleLevel 41 6.135e-05 6.801e-05 8.371e-05 0.00% Castro::do_old_sources() 10 4.551e-05 5.653e-05 7.178e-05 0.00% FabArray::ParallelCopy() 41 6.025e-05 6.403e-05 7.046e-05 0.00% Castro::do_new_sources() 10 4.774e-05 5.632e-05 6.921e-05 0.00% Castro::apply_source_to_state() 20 3.513e-05 4.511e-05 6.755e-05 0.00% Amr::writeSmallPlotFile() 1 3.594e-05 4.964e-05 6.373e-05 0.00% Castro::subcycle_advance_ctu() 10 3.376e-05 4.377e-05 6.097e-05 0.00% Castro::finalize_advance() 10 5.007e-05 5.271e-05 5.667e-05 0.00% FabArrayBase::getCPC() 41 3.974e-05 4.432e-05 5.542e-05 0.00% Castro::construct_old_gravity() 10 3.62e-05 4.906e-05 5.413e-05 0.00% Castro::construct_new_gravity() 10 3.9e-05 4.428e-05 5.327e-05 0.00% Castro::advance() 10 2.887e-05 3.567e-05 4.112e-05 0.00% Castro::enforce_speed_limit() 62 2.439e-05 2.871e-05 3.498e-05 0.00% FabArrayBase::CPC::define() 2 2.371e-05 2.752e-05 3.466e-05 0.00% Gravity::swapTimeLevels() 10 9.422e-06 1.558e-05 3.223e-05 0.00% Castro::check_for_nan() 20 2.199e-05 2.5e-05 3.161e-05 0.00% Castro::post_timestep() 10 8.496e-06 1.331e-05 2.381e-05 0.00% Castro::create_source_corrector() 10 1.34e-05 1.676e-05 2.174e-05 0.00% Amr::initSubcycle() 1 8.41e-06 1.1e-05 1.615e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.934e-06 9.477e-06 1.429e-05 0.00% Castro::computeNewDt() 9 6.66e-06 8.381e-06 1.058e-05 0.00% Gravity::set_mass_offset() 10 7.134e-06 8.288e-06 9.502e-06 0.00% Amr::InitializeInit() 1 1.918e-06 3.355e-06 9.283e-06 0.00% Castro::post_init() 1 3.664e-06 5.297e-06 8.118e-06 0.00% Castro::retry_advance_ctu() 10 5.178e-06 6.088e-06 6.841e-06 0.00% Castro::FluxRegFineAdd() 10 5.615e-06 6.052e-06 6.568e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.016e-06 5.022e-06 6.16e-06 0.00% Castro::computeInitialDt() 2 3.7e-06 4.625e-06 5.355e-06 0.00% Castro::post_regrid() 1 2.245e-06 3.389e-06 4.599e-06 0.00% Amr::init() 1 1.771e-06 2.627e-06 3.119e-06 0.00% Amr::initialInit() 1 1.263e-06 1.624e-06 1.892e-06 0.00% DistributionMapping::Distribute() 1 9.24e-07 1.238e-06 1.541e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.446 3.446 3.446 100.00% Amr::coarseTimeStep() 10 3.195 3.195 3.195 92.73% Amr::timeStep() 10 3.185 3.186 3.186 92.46% Castro::advance() 10 3.171 3.171 3.171 92.02% Castro::subcycle_advance_ctu() 10 3.097 3.102 3.107 90.17% Castro::do_advance_ctu() 10 3.097 3.102 3.107 90.17% Castro::construct_ctu_hydro_source() 10 2.12 2.184 2.249 65.27% Gravity::make_radial_gravity() 21 0.3517 0.3634 0.3765 10.93% Gravity::get_new_grav_vector() 11 0.242 0.2446 0.2458 7.13% Amr::init() 1 0.2356 0.2359 0.236 6.85% Amr::initialInit() 1 0.2186 0.2192 0.2201 6.39% Castro::construct_old_gravity() 10 0.1958 0.2049 0.2142 6.22% Gravity::get_old_grav_vector() 10 0.1951 0.2042 0.2137 6.20% Castro::construct_new_gravity() 10 0.2058 0.2078 0.2088 6.06% MultiFab::min() 10 0.06948 0.1367 0.2036 5.91% FillPatchIterator::Initialize 41 0.1616 0.171 0.1881 5.46% Amr::InitializeInit() 1 0.05597 0.1051 0.1786 5.18% Amr::defBaseLevel() 1 0.05597 0.1051 0.1786 5.18% Castro::initialize_do_advance() 10 0.1487 0.1586 0.1631 4.73% Amr::FinalizeInit() 1 0.04148 0.1141 0.1626 4.72% Castro::initData() 1 0.04148 0.08989 0.1596 4.63% FillPatchSingleLevel 41 0.1196 0.131 0.1579 4.58% Castro::estTimeStep() 21 0.02898 0.09926 0.1526 4.43% Castro::computeInitialDt() 2 0.002473 0.07605 0.1253 3.63% Castro::expand_state() 10 0.1036 0.1138 0.1185 3.44% FabArray::ParallelCopy() 41 0.07828 0.0892 0.1175 3.41% Castro::clean_state() 62 0.1057 0.1082 0.1125 3.26% FabArray::ParallelCopy_finish() 41 0.03742 0.04971 0.08364 2.43% FabArray::setVal() 139 0.06249 0.06816 0.0765 2.22% Castro::initialize_advance() 10 0.06313 0.06918 0.07396 2.15% Castro::computeTemp() 63 0.0676 0.06967 0.07375 2.14% Castro::do_new_sources() 10 0.05747 0.06159 0.06871 1.99% Castro::reset_internal_energy() 63 0.04883 0.05055 0.05357 1.55% Castro::do_old_sources() 10 0.03863 0.04371 0.04513 1.31% StateDataPhysBCFunct::() 41 0.03898 0.04168 0.04436 1.29% StateData::FillBoundary(geom) 41 0.03888 0.04156 0.04426 1.28% FabArray::ParallelCopy_nowait() 41 0.0338 0.03943 0.04167 1.21% Castro::post_init() 1 0.03727 0.03771 0.03801 1.10% Castro::normalize_species() 62 0.03259 0.03338 0.03414 0.99% Castro::construct_new_source() 50 0.02762 0.02942 0.03177 0.92% Gravity::interpolate_monopole_grav() 21 0.02787 0.02835 0.02917 0.85% Amr::writePlotFile() 2 0.02604 0.02696 0.0277 0.80% Castro::construct_new_gravity_source() 10 0.0214 0.02325 0.02551 0.74% VisMF::Write(FabArray) 2 0.01264 0.01343 0.01645 0.48% Castro::post_timestep() 10 0.01414 0.01448 0.015 0.44% Castro::apply_source_to_state() 20 0.01248 0.01393 0.01449 0.42% MultiFab::Saxpy() 20 0.01244 0.01389 0.01442 0.42% Castro::check_for_nan() 20 0.01019 0.0108 0.01191 0.35% MultiFab::contains_nan() 20 0.01017 0.01078 0.01189 0.34% Castro::construct_old_source() 50 0.007546 0.01034 0.01101 0.32% FabArray::setDomainBndry() 41 0.0069 0.00974 0.011 0.32% Castro::construct_old_gravity_source() 10 0.007499 0.01027 0.01093 0.32% Castro::computeNewDt() 9 0.00692 0.007606 0.008516 0.25% AmrLevel::AmrLevel(dm) 1 0.00437 0.004948 0.006475 0.19% StateData::define() 4 0.004361 0.004939 0.006463 0.19% Castro::enforce_min_density() 62 0.005574 0.00601 0.006295 0.18% Castro::swap_state_time_levels() 10 0.003012 0.003749 0.005296 0.15% Castro::post_regrid() 1 0.001435 0.001737 0.002585 0.08% Castro::finalize_do_advance() 10 0.0004601 0.0009371 0.001101 0.03% Amr::InitAmr() 1 0.0002956 0.0003621 0.0006209 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.73e-05 0.000304 0.0003724 0.01% DistributionMapping::LeastUsedCPUs() 1 1.128e-05 0.0002977 0.0003649 0.01% Castro::enforce_consistent_e() 1 7.999e-05 9.916e-05 0.0001455 0.00% FabArrayBase::getCPC() 41 6.35e-05 7.184e-05 8.239e-05 0.00% Amr::writeSmallPlotFile() 1 3.594e-05 4.964e-05 6.373e-05 0.00% Castro::finalize_advance() 10 5.585e-05 5.876e-05 6.269e-05 0.00% Castro::enforce_speed_limit() 62 2.439e-05 2.871e-05 3.498e-05 0.00% FabArrayBase::CPC::define() 2 2.371e-05 2.752e-05 3.466e-05 0.00% Gravity::swapTimeLevels() 10 9.422e-06 1.558e-05 3.223e-05 0.00% Castro::create_source_corrector() 10 1.34e-05 1.676e-05 2.174e-05 0.00% Amr::initSubcycle() 1 8.41e-06 1.1e-05 1.615e-05 0.00% Gravity::set_mass_offset() 10 7.134e-06 8.288e-06 9.502e-06 0.00% Castro::retry_advance_ctu() 10 5.178e-06 6.088e-06 6.841e-06 0.00% Castro::FluxRegFineAdd() 10 5.615e-06 6.052e-06 6.568e-06 0.00% DistributionMapping::Distribute() 1 9.24e-07 1.238e-06 1.541e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.01-41-gf7c9c3bd7347) finalized