MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.01-44-gfd6d6494bb75) initialized Starting run at 06:31:41 UTC on 2022-01-31. Successfully read inputs file ... Castro git describe: 21.12-28-g756d00e43 AMReX git describe: 22.01-44-gfd6d6494b Microphysics git describe: 22.01-22-g0edf069b reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012978208 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.331040203 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.351446943 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.360992894 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.310837775 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.315449207 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.340468477 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.296490285 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.291725767 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.290821819 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.293340728 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009787288 seconds Ending run at 06:31:45 UTC on 2022-01-31. Run time = 3.367687365 Run time without initialization = 3.195881616 Average number of zones advanced per microsecond: 0.820 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.367 ... 3.368 ... 3.368 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1346 2.1753 2.2486 66.77% Gravity::make_radial_gravity() 21 0.3362 0.3526 0.3654 10.85% MultiFab::min() 10 0.05015 0.1251 0.1686 5.01% Castro::initData() 1 0.038 0.07631 0.113 3.35% Castro::estTimeStep() 21 0.01828 0.06552 0.111 3.30% FabArray::setVal() 143 0.06886 0.07266 0.07785 2.31% FabArray::ParallelCopy_finish() 41 0.03378 0.04086 0.06599 1.96% Castro::reset_internal_energy() 63 0.04675 0.04953 0.0525 1.56% StateData::FillBoundary(geom) 41 0.03779 0.04122 0.04575 1.36% FabArray::ParallelCopy_nowait() 41 0.03502 0.04075 0.04301 1.28% Castro::normalize_species() 62 0.03258 0.03328 0.0344 1.02% FillPatchIterator::Initialize 41 0.02354 0.03067 0.03343 0.99% Castro::construct_new_gravity_source() 10 0.02191 0.02426 0.02919 0.87% Gravity::interpolate_monopole_grav() 21 0.02766 0.02823 0.02903 0.86% Castro::do_advance_ctu() 10 0.01699 0.02006 0.02406 0.71% Castro::expand_state() 10 0.01179 0.01833 0.02099 0.62% Castro::computeTemp() 63 0.01722 0.01843 0.01942 0.58% Castro::initialize_do_advance() 10 0.01051 0.01628 0.01778 0.53% MultiFab::Saxpy() 20 0.0142 0.0148 0.01591 0.47% Castro::initialize_advance() 10 0.01055 0.01243 0.01454 0.43% VisMF::Write(FabArray) 2 0.01162 0.01199 0.01402 0.42% Gravity::get_new_grav_vector() 11 0.01009 0.01125 0.01378 0.41% MultiFab::contains_nan() 20 0.01039 0.0115 0.01317 0.39% Castro::construct_old_gravity_source() 10 0.007008 0.01101 0.0122 0.36% FabArray::setDomainBndry() 41 0.006926 0.01011 0.01166 0.35% Amr::writePlotFile() 2 0.008956 0.01084 0.01137 0.34% Gravity::get_old_grav_vector() 10 0.006786 0.009084 0.01029 0.31% Castro::enforce_min_density() 62 0.006613 0.006849 0.007099 0.21% Amr::defBaseLevel() 1 0.006678 0.006758 0.006829 0.20% Castro::construct_new_source() 50 0.006018 0.006239 0.006652 0.20% StateData::define() 4 0.004413 0.004495 0.004632 0.14% Castro::swap_state_time_levels() 10 0.003006 0.003803 0.004025 0.12% main() 1 0.003653 0.003845 0.00399 0.12% Amr::coarseTimeStep() 10 0.000348 0.0005854 0.00121 0.04% Castro::finalize_do_advance() 10 0.0004625 0.000812 0.000932 0.03% Amr::timeStep() 10 0.0001618 0.0002325 0.0004532 0.01% Amr::InitAmr() 1 0.000257 0.0002771 0.0003776 0.01% Castro::clean_state() 62 0.0001276 0.0001406 0.0001611 0.00% DistributionMapping::LeastUsedCPUs() 1 7.224e-06 0.0001084 0.0001244 0.00% StateDataPhysBCFunct::() 41 0.0001047 0.0001161 0.0001242 0.00% Castro::enforce_consistent_e() 1 7.523e-05 8.548e-05 9.953e-05 0.00% Castro::construct_old_source() 50 5.05e-05 6.943e-05 8.245e-05 0.00% Amr::FinalizeInit() 1 3.811e-06 1.427e-05 7.805e-05 0.00% FillPatchSingleLevel 41 6.079e-05 6.847e-05 7.7e-05 0.00% Castro::do_old_sources() 10 5.142e-05 6.212e-05 7.535e-05 0.00% Castro::finalize_advance() 10 5.02e-05 5.534e-05 7.125e-05 0.00% FabArray::ParallelCopy() 41 5.991e-05 6.506e-05 7.106e-05 0.00% Amr::writeSmallPlotFile() 1 2.626e-05 5.012e-05 6.881e-05 0.00% Castro::construct_old_gravity() 10 4.141e-05 5.035e-05 6.857e-05 0.00% Castro::advance() 10 3.251e-05 4.032e-05 6.271e-05 0.00% Castro::do_new_sources() 10 4.758e-05 5.62e-05 6.096e-05 0.00% Castro::apply_source_to_state() 20 3.635e-05 4.335e-05 5.779e-05 0.00% FabArrayBase::getCPC() 41 3.841e-05 4.577e-05 5.411e-05 0.00% Castro::construct_new_gravity() 10 3.91e-05 4.549e-05 5.244e-05 0.00% Castro::subcycle_advance_ctu() 10 3.248e-05 4.396e-05 5.126e-05 0.00% Castro::enforce_speed_limit() 62 2.634e-05 2.979e-05 3.37e-05 0.00% FabArrayBase::CPC::define() 2 2.52e-05 2.698e-05 3.164e-05 0.00% Castro::check_for_nan() 20 2.204e-05 2.71e-05 3.08e-05 0.00% Castro::create_source_corrector() 10 1.2e-05 1.733e-05 2.006e-05 0.00% Gravity::swapTimeLevels() 10 1.008e-05 1.175e-05 1.342e-05 0.00% Castro::post_timestep() 10 8.376e-06 9.275e-06 1.105e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.301e-06 9.292e-06 1.097e-05 0.00% Castro::computeNewDt() 9 6.878e-06 8.26e-06 9.839e-06 0.00% Amr::initSubcycle() 1 8.329e-06 8.768e-06 9.499e-06 0.00% Castro::post_init() 1 3.02e-06 5e-06 8.906e-06 0.00% Gravity::set_mass_offset() 10 6.727e-06 7.771e-06 8.637e-06 0.00% Castro::FluxRegFineAdd() 10 5.184e-06 6.478e-06 8.32e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.524e-06 4.852e-06 7.23e-06 0.00% Castro::retry_advance_ctu() 10 5.321e-06 6.231e-06 7.023e-06 0.00% Amr::InitializeInit() 1 2.098e-06 3.216e-06 5.58e-06 0.00% Castro::post_regrid() 1 2.131e-06 3.735e-06 5.119e-06 0.00% Castro::computeInitialDt() 2 3.263e-06 4.438e-06 5.036e-06 0.00% Amr::init() 1 2.426e-06 2.666e-06 2.884e-06 0.00% Amr::initialInit() 1 1.264e-06 1.576e-06 2.163e-06 0.00% DistributionMapping::Distribute() 1 8.64e-07 1.09e-06 1.351e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.367 3.368 3.368 100.00% Amr::coarseTimeStep() 10 3.182 3.182 3.182 94.49% Amr::timeStep() 10 3.173 3.173 3.174 94.24% Castro::advance() 10 3.158 3.159 3.159 93.80% Castro::subcycle_advance_ctu() 10 3.081 3.084 3.086 91.63% Castro::do_advance_ctu() 10 3.081 3.084 3.086 91.63% Castro::construct_ctu_hydro_source() 10 2.135 2.175 2.249 66.77% Gravity::make_radial_gravity() 21 0.3362 0.3526 0.3654 10.85% Gravity::get_new_grav_vector() 11 0.2324 0.2335 0.2343 6.96% Castro::construct_old_gravity() 10 0.1938 0.2055 0.2179 6.47% Gravity::get_old_grav_vector() 10 0.1929 0.2048 0.2172 6.45% Castro::construct_new_gravity() 10 0.209 0.2101 0.2111 6.27% Amr::init() 1 0.1713 0.1714 0.1714 5.09% FillPatchIterator::Initialize 41 0.1576 0.1639 0.1713 5.09% MultiFab::min() 10 0.05015 0.1251 0.1686 5.01% Amr::initialInit() 1 0.1581 0.1584 0.1586 4.71% Castro::initialize_do_advance() 10 0.1389 0.1511 0.1568 4.66% FillPatchSingleLevel 41 0.116 0.1232 0.1408 4.18% Amr::InitializeInit() 1 0.05625 0.09473 0.1317 3.91% Amr::defBaseLevel() 1 0.05625 0.09473 0.1317 3.91% Castro::initData() 1 0.04186 0.08024 0.1169 3.47% Castro::clean_state() 62 0.1028 0.1073 0.1123 3.33% Castro::estTimeStep() 21 0.01828 0.06552 0.111 3.30% Castro::expand_state() 10 0.09833 0.1065 0.1109 3.29% Amr::FinalizeInit() 1 0.02655 0.06365 0.1023 3.04% FabArray::ParallelCopy() 41 0.07552 0.08175 0.1012 3.00% FabArray::setVal() 143 0.06886 0.07266 0.07785 2.31% Castro::initialize_advance() 10 0.07267 0.07464 0.07761 2.30% Castro::computeInitialDt() 2 0.001728 0.0387 0.0772 2.29% Castro::computeTemp() 63 0.0641 0.06795 0.07178 2.13% Castro::do_new_sources() 10 0.05651 0.06177 0.07131 2.12% FabArray::ParallelCopy_finish() 41 0.03378 0.04086 0.06599 1.96% Castro::reset_internal_energy() 63 0.04675 0.04953 0.0525 1.56% Castro::do_old_sources() 10 0.04079 0.04566 0.04685 1.39% StateDataPhysBCFunct::() 41 0.0379 0.04134 0.04587 1.36% StateData::FillBoundary(geom) 41 0.03779 0.04122 0.04575 1.36% FabArray::ParallelCopy_nowait() 41 0.0351 0.04082 0.04307 1.28% Castro::construct_new_source() 50 0.02797 0.0305 0.03584 1.06% Castro::normalize_species() 62 0.03258 0.03328 0.0344 1.02% Castro::construct_new_gravity_source() 10 0.02191 0.02426 0.02919 0.87% Gravity::interpolate_monopole_grav() 21 0.02766 0.02823 0.02903 0.86% Castro::post_init() 1 0.02411 0.02433 0.02455 0.73% Amr::writePlotFile() 2 0.02267 0.02283 0.02304 0.68% Castro::apply_source_to_state() 20 0.01424 0.01485 0.01597 0.47% MultiFab::Saxpy() 20 0.0142 0.0148 0.01591 0.47% Castro::post_timestep() 10 0.0136 0.01428 0.01487 0.44% VisMF::Write(FabArray) 2 0.01162 0.01199 0.01402 0.42% Castro::check_for_nan() 20 0.01042 0.01153 0.0132 0.39% MultiFab::contains_nan() 20 0.01039 0.0115 0.01317 0.39% Castro::construct_old_source() 50 0.007058 0.01108 0.01228 0.36% Castro::construct_old_gravity_source() 10 0.007008 0.01101 0.0122 0.36% FabArray::setDomainBndry() 41 0.006926 0.01011 0.01166 0.35% Castro::computeNewDt() 9 0.006774 0.007522 0.00823 0.24% Castro::enforce_min_density() 62 0.006613 0.006849 0.007099 0.21% AmrLevel::AmrLevel(dm) 1 0.004424 0.004505 0.00464 0.14% StateData::define() 4 0.004413 0.004495 0.004632 0.14% Castro::swap_state_time_levels() 10 0.003006 0.003803 0.004025 0.12% Castro::post_regrid() 1 0.001466 0.001509 0.001585 0.05% Castro::finalize_do_advance() 10 0.0004625 0.000812 0.000932 0.03% Amr::InitAmr() 1 0.0002654 0.0002859 0.0003862 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.185e-05 0.0001143 0.0001321 0.00% DistributionMapping::LeastUsedCPUs() 1 7.224e-06 0.0001084 0.0001244 0.00% Castro::enforce_consistent_e() 1 7.523e-05 8.548e-05 9.953e-05 0.00% FabArrayBase::getCPC() 41 6.445e-05 7.275e-05 8.575e-05 0.00% Castro::finalize_advance() 10 5.636e-05 6.182e-05 7.853e-05 0.00% Amr::writeSmallPlotFile() 1 2.626e-05 5.012e-05 6.881e-05 0.00% Castro::enforce_speed_limit() 62 2.634e-05 2.979e-05 3.37e-05 0.00% FabArrayBase::CPC::define() 2 2.52e-05 2.698e-05 3.164e-05 0.00% Castro::create_source_corrector() 10 1.2e-05 1.733e-05 2.006e-05 0.00% Gravity::swapTimeLevels() 10 1.008e-05 1.175e-05 1.342e-05 0.00% Amr::initSubcycle() 1 8.329e-06 8.768e-06 9.499e-06 0.00% Gravity::set_mass_offset() 10 6.727e-06 7.771e-06 8.637e-06 0.00% Castro::FluxRegFineAdd() 10 5.184e-06 6.478e-06 8.32e-06 0.00% Castro::retry_advance_ctu() 10 5.321e-06 6.231e-06 7.023e-06 0.00% DistributionMapping::Distribute() 1 8.64e-07 1.09e-06 1.351e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.01-44-gfd6d6494bb75) finalized