MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.01-46-g89153db246e4) initialized Starting run at 06:31:20 UTC on 2022-02-01. Successfully read inputs file ... Castro git describe: 21.12-28-g756d00e43 AMReX git describe: 22.01-46-g89153db24 Microphysics git describe: 22.01-22-g0edf069b reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013023159 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.342209916 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.331839588 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.311803232 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.311355065 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.311793542 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.331770794 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.29816631 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.292719119 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.290937567 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.291721427 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009629296 seconds Ending run at 06:31:23 UTC on 2022-02-01. Run time = 3.313803736 Run time without initialization = 3.127114959 Average number of zones advanced per microsecond: 0.838 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.314 ... 3.314 ... 3.314 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0817 2.1706 2.2047 66.53% Gravity::make_radial_gravity() 21 0.3404 0.3488 0.37 11.16% MultiFab::min() 10 0.04138 0.07667 0.1695 5.11% Castro::initData() 1 0.0402 0.08289 0.1248 3.77% Castro::estTimeStep() 21 0.02402 0.06473 0.1093 3.30% FabArray::ParallelCopy_finish() 41 0.03118 0.04334 0.07912 2.39% FabArray::setVal() 143 0.0602 0.06961 0.0736 2.22% Castro::reset_internal_energy() 63 0.0489 0.04993 0.05166 1.56% StateData::FillBoundary(geom) 41 0.03838 0.04167 0.04556 1.37% FabArray::ParallelCopy_nowait() 41 0.03498 0.04041 0.04285 1.29% Castro::normalize_species() 62 0.03215 0.03357 0.03487 1.05% FillPatchIterator::Initialize 41 0.02266 0.03025 0.03361 1.01% Gravity::interpolate_monopole_grav() 21 0.02712 0.02797 0.02841 0.86% Castro::construct_new_gravity_source() 10 0.02029 0.0236 0.02626 0.79% Castro::do_advance_ctu() 10 0.01475 0.01947 0.02381 0.72% Castro::expand_state() 10 0.01176 0.01843 0.0207 0.62% Castro::computeTemp() 63 0.01789 0.01881 0.01933 0.58% Castro::initialize_do_advance() 10 0.01014 0.0163 0.01866 0.56% MultiFab::Saxpy() 20 0.01296 0.01482 0.01603 0.48% VisMF::Write(FabArray) 2 0.01168 0.0124 0.01471 0.44% Castro::initialize_advance() 10 0.008173 0.01139 0.01337 0.40% Gravity::get_new_grav_vector() 11 0.009438 0.01116 0.013 0.39% Castro::construct_old_gravity_source() 10 0.007379 0.01095 0.01197 0.36% MultiFab::contains_nan() 20 0.01012 0.01107 0.01183 0.36% Amr::writePlotFile() 2 0.008159 0.01039 0.01149 0.35% FabArray::setDomainBndry() 41 0.007071 0.01003 0.0114 0.34% Gravity::get_old_grav_vector() 10 0.006775 0.009099 0.01043 0.31% Amr::defBaseLevel() 1 0.006641 0.007077 0.007345 0.22% Castro::construct_new_source() 50 0.005888 0.006508 0.006738 0.20% Castro::enforce_min_density() 62 0.005653 0.006106 0.006482 0.20% StateData::define() 4 0.004356 0.004628 0.004803 0.14% Castro::swap_state_time_levels() 10 0.002437 0.003501 0.004164 0.13% main() 1 0.003712 0.00385 0.00404 0.12% Amr::coarseTimeStep() 10 0.0004213 0.0006043 0.001235 0.04% Castro::finalize_do_advance() 10 0.0004014 0.0009834 0.0012 0.04% Amr::timeStep() 10 0.0001644 0.0002259 0.0004447 0.01% Amr::InitAmr() 1 0.0002546 0.0002898 0.0003631 0.01% Castro::clean_state() 62 0.0001382 0.0001594 0.0001922 0.01% StateDataPhysBCFunct::() 41 0.0001208 0.0001323 0.0001525 0.00% DistributionMapping::LeastUsedCPUs() 1 6.849e-06 8.576e-05 0.0001347 0.00% Amr::FinalizeInit() 1 3.624e-06 1.691e-05 0.0001029 0.00% Castro::enforce_consistent_e() 1 8.082e-05 8.937e-05 9.791e-05 0.00% FillPatchSingleLevel 41 6.597e-05 7.315e-05 9.365e-05 0.00% Castro::construct_old_source() 50 5.515e-05 8.11e-05 9.21e-05 0.00% FabArray::ParallelCopy() 41 6.885e-05 7.537e-05 8.423e-05 0.00% Castro::do_new_sources() 10 6.106e-05 6.777e-05 7.844e-05 0.00% Castro::do_old_sources() 10 5.927e-05 6.831e-05 7.695e-05 0.00% FabArrayBase::getCPC() 41 4.494e-05 5.579e-05 7.392e-05 0.00% Castro::finalize_advance() 10 5.136e-05 5.967e-05 7.231e-05 0.00% Castro::construct_old_gravity() 10 5.439e-05 5.933e-05 6.496e-05 0.00% Amr::writeSmallPlotFile() 1 2.594e-05 5.208e-05 5.93e-05 0.00% Castro::apply_source_to_state() 20 4.005e-05 5.09e-05 5.786e-05 0.00% Castro::construct_new_gravity() 10 4.382e-05 5.111e-05 5.768e-05 0.00% Castro::advance() 10 3.679e-05 4.459e-05 5.579e-05 0.00% Castro::subcycle_advance_ctu() 10 4.281e-05 4.72e-05 5.494e-05 0.00% Castro::enforce_speed_limit() 62 2.928e-05 3.456e-05 4.162e-05 0.00% Castro::check_for_nan() 20 2.418e-05 2.829e-05 3.04e-05 0.00% FabArrayBase::CPC::define() 2 2.294e-05 2.642e-05 3.013e-05 0.00% Castro::create_source_corrector() 10 1.488e-05 1.858e-05 2.143e-05 0.00% Gravity::swapTimeLevels() 10 1.063e-05 1.422e-05 2.005e-05 0.00% Castro::post_timestep() 10 8.016e-06 9.475e-06 1.165e-05 0.00% Gravity::set_mass_offset() 10 8.088e-06 9.019e-06 1.059e-05 0.00% Amr::initSubcycle() 1 8.014e-06 9.04e-06 9.459e-06 0.00% Castro::computeNewDt() 9 7.414e-06 8.51e-06 9.025e-06 0.00% AmrLevel::AmrLevel(dm) 1 7.254e-06 7.74e-06 8.053e-06 0.00% Castro::retry_advance_ctu() 10 5.201e-06 5.863e-06 7.208e-06 0.00% Castro::FluxRegFineAdd() 10 5.347e-06 5.92e-06 6.707e-06 0.00% Amr::InitializeInit() 1 1.903e-06 2.609e-06 5.911e-06 0.00% Castro::post_init() 1 2.912e-06 3.877e-06 5.272e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.406e-06 4.124e-06 5.099e-06 0.00% Castro::post_regrid() 1 1.614e-06 2.841e-06 4.895e-06 0.00% Castro::computeInitialDt() 2 2.564e-06 3.565e-06 4.832e-06 0.00% Amr::init() 1 2.031e-06 2.348e-06 2.754e-06 0.00% Amr::initialInit() 1 1.131e-06 1.557e-06 1.958e-06 0.00% DistributionMapping::Distribute() 1 9.71e-07 1.067e-06 1.135e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.314 3.314 3.314 100.00% Amr::coarseTimeStep() 10 3.114 3.114 3.114 93.96% Amr::timeStep() 10 3.104 3.105 3.105 93.70% Castro::advance() 10 3.09 3.09 3.09 93.25% Castro::subcycle_advance_ctu() 10 3.016 3.019 3.029 91.40% Castro::do_advance_ctu() 10 3.016 3.019 3.029 91.40% Castro::construct_ctu_hydro_source() 10 2.082 2.171 2.205 66.53% Gravity::make_radial_gravity() 21 0.3404 0.3488 0.37 11.16% Gravity::get_new_grav_vector() 11 0.2248 0.2266 0.2279 6.88% Castro::construct_old_gravity() 10 0.1999 0.2079 0.225 6.79% Gravity::get_old_grav_vector() 10 0.1991 0.2071 0.2243 6.77% Castro::construct_new_gravity() 10 0.1991 0.2005 0.2016 6.08% Amr::init() 1 0.1862 0.1862 0.1863 5.62% FillPatchIterator::Initialize 41 0.1584 0.1661 0.1834 5.53% Amr::initialInit() 1 0.1728 0.1731 0.1734 5.23% MultiFab::min() 10 0.04138 0.07667 0.1695 5.11% Castro::initialize_do_advance() 10 0.1482 0.1534 0.1604 4.84% FillPatchSingleLevel 41 0.1172 0.1258 0.1537 4.64% Amr::InitializeInit() 1 0.05845 0.1013 0.1437 4.34% Amr::defBaseLevel() 1 0.05844 0.1013 0.1437 4.34% Castro::initData() 1 0.04388 0.0869 0.1287 3.88% Amr::FinalizeInit() 1 0.0292 0.07182 0.1145 3.46% Castro::expand_state() 10 0.1031 0.1087 0.1145 3.45% FabArray::ParallelCopy() 41 0.07419 0.0839 0.1143 3.45% Castro::clean_state() 62 0.1047 0.1076 0.1106 3.34% Castro::estTimeStep() 21 0.02402 0.06473 0.1093 3.30% Castro::computeInitialDt() 2 0.001716 0.04415 0.08694 2.62% FabArray::ParallelCopy_finish() 41 0.03118 0.04334 0.07912 2.39% Castro::initialize_advance() 10 0.06054 0.07104 0.07392 2.23% FabArray::setVal() 143 0.0602 0.06961 0.0736 2.22% Castro::computeTemp() 63 0.06715 0.06873 0.07094 2.14% Castro::do_new_sources() 10 0.05619 0.06174 0.06613 2.00% Castro::reset_internal_energy() 63 0.0489 0.04993 0.05166 1.56% Castro::do_old_sources() 10 0.03916 0.0457 0.04753 1.43% StateDataPhysBCFunct::() 41 0.03852 0.04181 0.04568 1.38% StateData::FillBoundary(geom) 41 0.03838 0.04167 0.04556 1.37% FabArray::ParallelCopy_nowait() 41 0.03508 0.04049 0.04293 1.30% Castro::normalize_species() 62 0.03215 0.03357 0.03487 1.05% Castro::construct_new_source() 50 0.02618 0.03011 0.033 1.00% Gravity::interpolate_monopole_grav() 21 0.02712 0.02797 0.02841 0.86% Castro::post_init() 1 0.02669 0.02703 0.02722 0.82% Castro::construct_new_gravity_source() 10 0.02029 0.0236 0.02626 0.79% Amr::writePlotFile() 2 0.02255 0.02279 0.02316 0.70% Castro::apply_source_to_state() 20 0.01302 0.01487 0.01609 0.49% MultiFab::Saxpy() 20 0.01296 0.01482 0.01603 0.48% Castro::post_timestep() 10 0.01377 0.01426 0.01474 0.44% VisMF::Write(FabArray) 2 0.01168 0.0124 0.01471 0.44% Castro::construct_old_source() 50 0.007435 0.01103 0.01206 0.36% Castro::construct_old_gravity_source() 10 0.007379 0.01095 0.01197 0.36% Castro::check_for_nan() 20 0.01015 0.0111 0.01186 0.36% MultiFab::contains_nan() 20 0.01012 0.01107 0.01183 0.36% FabArray::setDomainBndry() 41 0.007071 0.01003 0.0114 0.34% Castro::computeNewDt() 9 0.006811 0.007402 0.008212 0.25% Castro::enforce_min_density() 62 0.005653 0.006106 0.006482 0.20% AmrLevel::AmrLevel(dm) 1 0.004364 0.004636 0.004811 0.15% StateData::define() 4 0.004356 0.004628 0.004803 0.14% Castro::swap_state_time_levels() 10 0.002437 0.003501 0.004164 0.13% Castro::post_regrid() 1 0.001454 0.00154 0.00172 0.05% Castro::finalize_do_advance() 10 0.0004014 0.0009834 0.0012 0.04% Amr::InitAmr() 1 0.0002635 0.0002988 0.0003711 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.123e-05 9.095e-05 0.0001409 0.00% DistributionMapping::LeastUsedCPUs() 1 6.849e-06 8.576e-05 0.0001347 0.00% FabArrayBase::getCPC() 41 6.788e-05 8.221e-05 0.000104 0.00% Castro::enforce_consistent_e() 1 8.082e-05 8.937e-05 9.791e-05 0.00% Castro::finalize_advance() 10 5.67e-05 6.559e-05 7.781e-05 0.00% Amr::writeSmallPlotFile() 1 2.594e-05 5.208e-05 5.93e-05 0.00% Castro::enforce_speed_limit() 62 2.928e-05 3.456e-05 4.162e-05 0.00% FabArrayBase::CPC::define() 2 2.294e-05 2.642e-05 3.013e-05 0.00% Castro::create_source_corrector() 10 1.488e-05 1.858e-05 2.143e-05 0.00% Gravity::swapTimeLevels() 10 1.063e-05 1.422e-05 2.005e-05 0.00% Gravity::set_mass_offset() 10 8.088e-06 9.019e-06 1.059e-05 0.00% Amr::initSubcycle() 1 8.014e-06 9.04e-06 9.459e-06 0.00% Castro::retry_advance_ctu() 10 5.201e-06 5.863e-06 7.208e-06 0.00% Castro::FluxRegFineAdd() 10 5.347e-06 5.92e-06 6.707e-06 0.00% DistributionMapping::Distribute() 1 9.71e-07 1.067e-06 1.135e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.01-46-g89153db246e4) finalized