MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.02-1-gbf267b095426) initialized Starting run at 06:31:43 UTC on 2022-02-02. Successfully read inputs file ... Castro git describe: 22.02-1-g342411b81 AMReX git describe: 22.02-1-gbf267b095 Microphysics git describe: 22.02 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012715594 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.338094721 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.328046997 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.343441552 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.311630442 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.312597986 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.33456972 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.296194565 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.287907285 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.288455315 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.288938611 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009337308 seconds Ending run at 06:31:46 UTC on 2022-02-02. Run time = 3.338193657 Run time without initialization = 3.142730989 Average number of zones advanced per microsecond: 0.834 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.338 ... 3.338 ... 3.338 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0951 2.1645 2.2258 66.68% Gravity::make_radial_gravity() 21 0.3372 0.3484 0.3625 10.86% MultiFab::min() 10 0.02798 0.0925 0.164 4.91% Castro::initData() 1 0.03816 0.08401 0.1343 4.02% Castro::estTimeStep() 21 0.02618 0.073 0.1243 3.72% FabArray::setVal() 143 0.06958 0.0726 0.07663 2.30% FabArray::ParallelCopy_finish() 41 0.03038 0.03884 0.05377 1.61% Castro::reset_internal_energy() 63 0.04715 0.04953 0.05089 1.52% StateData::FillBoundary(geom) 41 0.03925 0.04143 0.04438 1.33% FabArray::ParallelCopy_nowait() 41 0.0392 0.04177 0.04357 1.31% FillPatchIterator::Initialize 41 0.02392 0.03114 0.03414 1.02% Castro::normalize_species() 62 0.03255 0.03316 0.03373 1.01% Gravity::interpolate_monopole_grav() 21 0.02736 0.02777 0.02835 0.85% Castro::construct_new_gravity_source() 10 0.02253 0.02446 0.02631 0.79% Castro::do_advance_ctu() 10 0.01774 0.02051 0.02354 0.71% Castro::expand_state() 10 0.0125 0.01893 0.02173 0.65% Castro::computeTemp() 63 0.01749 0.01852 0.01938 0.58% Castro::initialize_do_advance() 10 0.01074 0.01635 0.01791 0.54% MultiFab::Saxpy() 20 0.01482 0.01571 0.01685 0.50% Castro::initialize_advance() 10 0.01065 0.01243 0.01444 0.43% VisMF::Write(FabArray) 2 0.01139 0.01183 0.01409 0.42% Gravity::get_new_grav_vector() 11 0.0101 0.01115 0.01274 0.38% Castro::construct_old_gravity_source() 10 0.009269 0.0115 0.01215 0.36% MultiFab::contains_nan() 20 0.01041 0.0114 0.01205 0.36% FabArray::setDomainBndry() 41 0.007266 0.01035 0.01171 0.35% Amr::writePlotFile() 2 0.008183 0.01057 0.01106 0.33% Gravity::get_old_grav_vector() 10 0.007754 0.009334 0.01038 0.31% Amr::defBaseLevel() 1 0.006313 0.007456 0.01023 0.31% Castro::construct_new_source() 50 0.0064 0.006647 0.00677 0.20% Castro::enforce_min_density() 62 0.005777 0.006124 0.00639 0.19% StateData::define() 4 0.004219 0.004824 0.006306 0.19% Castro::swap_state_time_levels() 10 0.002899 0.003784 0.004244 0.13% main() 1 0.003431 0.003701 0.003917 0.12% Amr::coarseTimeStep() 10 0.0003337 0.0007209 0.001435 0.04% Castro::finalize_do_advance() 10 0.000818 0.001007 0.00123 0.04% Amr::InitAmr() 1 0.0002806 0.0003425 0.0004636 0.01% Amr::timeStep() 10 0.0001808 0.0002272 0.0004225 0.01% DistributionMapping::LeastUsedCPUs() 1 8.555e-06 0.0001592 0.0002294 0.01% Castro::clean_state() 62 0.0001296 0.0001404 0.0001541 0.00% StateDataPhysBCFunct::() 41 0.0001151 0.0001252 0.0001368 0.00% Castro::construct_old_source() 50 5.934e-05 7.511e-05 9.746e-05 0.00% Castro::enforce_consistent_e() 1 7.885e-05 8.688e-05 9.288e-05 0.00% FillPatchSingleLevel 41 5.764e-05 6.599e-05 7.705e-05 0.00% Castro::do_old_sources() 10 4.974e-05 5.999e-05 7.5e-05 0.00% FabArray::ParallelCopy() 41 5.721e-05 6.517e-05 7.434e-05 0.00% Castro::do_new_sources() 10 4.836e-05 6.194e-05 7.434e-05 0.00% Amr::writeSmallPlotFile() 1 4.168e-05 6.719e-05 7.411e-05 0.00% Amr::FinalizeInit() 1 3.233e-06 1.257e-05 6.801e-05 0.00% Castro::finalize_advance() 10 5.065e-05 5.468e-05 6.655e-05 0.00% Castro::subcycle_advance_ctu() 10 3.815e-05 4.604e-05 6.642e-05 0.00% Castro::advance() 10 3.37e-05 4.098e-05 6.436e-05 0.00% Castro::construct_old_gravity() 10 4.183e-05 5.059e-05 5.91e-05 0.00% FabArrayBase::getCPC() 41 4.092e-05 4.918e-05 5.72e-05 0.00% Castro::apply_source_to_state() 20 3.792e-05 4.453e-05 5.139e-05 0.00% Castro::construct_new_gravity() 10 3.887e-05 4.451e-05 4.846e-05 0.00% Castro::enforce_speed_limit() 62 2.906e-05 3.253e-05 3.887e-05 0.00% Castro::check_for_nan() 20 2.448e-05 2.772e-05 3.107e-05 0.00% FabArrayBase::CPC::define() 2 2.379e-05 2.593e-05 2.867e-05 0.00% Castro::create_source_corrector() 10 1.384e-05 1.85e-05 2.383e-05 0.00% Gravity::swapTimeLevels() 10 1.095e-05 1.306e-05 1.825e-05 0.00% Amr::initSubcycle() 1 8.368e-06 1.037e-05 1.5e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.37e-06 9.821e-06 1.362e-05 0.00% Gravity::set_mass_offset() 10 7.423e-06 9.037e-06 1.351e-05 0.00% Castro::post_timestep() 10 8.027e-06 9.264e-06 1.139e-05 0.00% Castro::post_init() 1 3.252e-06 4.739e-06 9.572e-06 0.00% Castro::computeNewDt() 9 6.467e-06 8.226e-06 9.491e-06 0.00% Castro::FluxRegFineAdd() 10 5.705e-06 6.2e-06 7.01e-06 0.00% Amr::InitializeInit() 1 1.874e-06 2.822e-06 6.37e-06 0.00% Castro::retry_advance_ctu() 10 4.824e-06 5.676e-06 6.319e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.486e-06 4.371e-06 5.897e-06 0.00% Castro::post_regrid() 1 1.652e-06 3.479e-06 5.165e-06 0.00% Castro::computeInitialDt() 2 2.909e-06 4.003e-06 5.043e-06 0.00% Amr::init() 1 2.043e-06 2.371e-06 3.068e-06 0.00% Amr::initialInit() 1 1.32e-06 1.531e-06 1.999e-06 0.00% DistributionMapping::Distribute() 1 9.18e-07 1.136e-06 1.396e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.338 3.338 3.338 100.00% Amr::coarseTimeStep() 10 3.13 3.13 3.13 93.75% Amr::timeStep() 10 3.119 3.12 3.12 93.47% Castro::advance() 10 3.105 3.105 3.105 93.03% Castro::subcycle_advance_ctu() 10 3.028 3.031 3.033 90.85% Castro::do_advance_ctu() 10 3.028 3.031 3.033 90.85% Castro::construct_ctu_hydro_source() 10 2.095 2.165 2.226 66.68% Gravity::make_radial_gravity() 21 0.3372 0.3484 0.3625 10.86% Gravity::get_new_grav_vector() 11 0.2239 0.2252 0.2266 6.79% Castro::construct_old_gravity() 10 0.2003 0.2092 0.2215 6.64% Gravity::get_old_grav_vector() 10 0.1994 0.2084 0.2207 6.61% Castro::construct_new_gravity() 10 0.1982 0.1991 0.2 5.99% Amr::init() 1 0.1948 0.195 0.195 5.84% Amr::initialInit() 1 0.1816 0.182 0.1823 5.46% FillPatchIterator::Initialize 41 0.1589 0.1639 0.1679 5.03% MultiFab::min() 10 0.02798 0.0925 0.164 4.91% Castro::initialize_do_advance() 10 0.1375 0.152 0.1577 4.72% Amr::InitializeInit() 1 0.05515 0.1023 0.1526 4.57% Amr::defBaseLevel() 1 0.05515 0.1023 0.1525 4.57% Castro::initData() 1 0.04192 0.08775 0.1381 4.14% FillPatchSingleLevel 41 0.1141 0.1224 0.1326 3.97% Amr::FinalizeInit() 1 0.02971 0.07962 0.1268 3.80% Castro::estTimeStep() 21 0.02618 0.073 0.1243 3.72% Castro::expand_state() 10 0.09995 0.1073 0.1123 3.36% Castro::clean_state() 62 0.1025 0.1066 0.1089 3.26% Castro::computeInitialDt() 2 0.001775 0.05193 0.0992 2.97% FabArray::ParallelCopy() 41 0.0726 0.08075 0.09312 2.79% Castro::initialize_advance() 10 0.0723 0.07412 0.07679 2.30% FabArray::setVal() 143 0.06958 0.0726 0.07663 2.30% Castro::computeTemp() 63 0.06469 0.06806 0.07002 2.10% Castro::do_new_sources() 10 0.05955 0.06332 0.06684 2.00% FabArray::ParallelCopy_finish() 41 0.03038 0.03884 0.05377 1.61% Castro::reset_internal_energy() 63 0.04715 0.04953 0.05089 1.52% Castro::do_old_sources() 10 0.04552 0.04725 0.04834 1.45% StateDataPhysBCFunct::() 41 0.03937 0.04155 0.0445 1.33% StateData::FillBoundary(geom) 41 0.03925 0.04143 0.04438 1.33% FabArray::ParallelCopy_nowait() 41 0.03928 0.04185 0.04364 1.31% Castro::normalize_species() 62 0.03255 0.03316 0.03373 1.01% Castro::construct_new_source() 50 0.02893 0.03111 0.03305 0.99% Gravity::interpolate_monopole_grav() 21 0.02736 0.02777 0.02835 0.85% Castro::post_init() 1 0.02695 0.02712 0.02724 0.82% Castro::construct_new_gravity_source() 10 0.02253 0.02446 0.02631 0.79% Amr::writePlotFile() 2 0.02216 0.0224 0.0226 0.68% Castro::apply_source_to_state() 20 0.01486 0.01576 0.0169 0.51% MultiFab::Saxpy() 20 0.01482 0.01571 0.01685 0.50% Castro::post_timestep() 10 0.01364 0.01438 0.01484 0.44% VisMF::Write(FabArray) 2 0.01139 0.01183 0.01409 0.42% Castro::construct_old_source() 50 0.009329 0.01158 0.01225 0.37% Castro::construct_old_gravity_source() 10 0.009269 0.0115 0.01215 0.36% Castro::check_for_nan() 20 0.01044 0.01143 0.01208 0.36% MultiFab::contains_nan() 20 0.01041 0.0114 0.01205 0.36% FabArray::setDomainBndry() 41 0.007266 0.01035 0.01171 0.35% Castro::computeNewDt() 9 0.007044 0.007978 0.008926 0.27% Castro::enforce_min_density() 62 0.005777 0.006124 0.00639 0.19% AmrLevel::AmrLevel(dm) 1 0.004228 0.004833 0.006318 0.19% StateData::define() 4 0.004219 0.004824 0.006306 0.19% Castro::swap_state_time_levels() 10 0.002899 0.003784 0.004244 0.13% Castro::post_regrid() 1 0.001428 0.001489 0.001677 0.05% Castro::finalize_do_advance() 10 0.000818 0.001007 0.00123 0.04% Amr::InitAmr() 1 0.000289 0.0003529 0.0004786 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.357e-05 0.0001647 0.0002367 0.01% DistributionMapping::LeastUsedCPUs() 1 8.555e-06 0.0001592 0.0002294 0.01% Castro::enforce_consistent_e() 1 7.885e-05 8.688e-05 9.288e-05 0.00% FabArrayBase::getCPC() 41 6.766e-05 7.511e-05 8.238e-05 0.00% Amr::writeSmallPlotFile() 1 4.168e-05 6.719e-05 7.411e-05 0.00% Castro::finalize_advance() 10 5.673e-05 6.088e-05 7.264e-05 0.00% Castro::enforce_speed_limit() 62 2.906e-05 3.253e-05 3.887e-05 0.00% FabArrayBase::CPC::define() 2 2.379e-05 2.593e-05 2.867e-05 0.00% Castro::create_source_corrector() 10 1.384e-05 1.85e-05 2.383e-05 0.00% Gravity::swapTimeLevels() 10 1.095e-05 1.306e-05 1.825e-05 0.00% Amr::initSubcycle() 1 8.368e-06 1.037e-05 1.5e-05 0.00% Gravity::set_mass_offset() 10 7.423e-06 9.037e-06 1.351e-05 0.00% Castro::FluxRegFineAdd() 10 5.705e-06 6.2e-06 7.01e-06 0.00% Castro::retry_advance_ctu() 10 4.824e-06 5.676e-06 6.319e-06 0.00% DistributionMapping::Distribute() 1 9.18e-07 1.136e-06 1.396e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.02-1-gbf267b095426) finalized