MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.02-1-gbf267b095426) initialized Starting run at 06:31:16 UTC on 2022-02-03. Successfully read inputs file ... Castro git describe: 22.02-1-g342411b81 AMReX git describe: 22.02-1-gbf267b095 Microphysics git describe: 22.02 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012809904 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.335165834 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.339247647 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.314510811 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.312816575 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.314800465 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.338659253 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.29410536 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.288742295 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.28806191 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.287459632 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009507932 seconds Ending run at 06:31:19 UTC on 2022-02-03. Run time = 3.313372675 Run time without initialization = 3.126638534 Average number of zones advanced per microsecond: 0.838 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.313 ... 3.313 ... 3.313 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1178 2.1714 2.2189 66.97% Gravity::make_radial_gravity() 21 0.3288 0.3409 0.347 10.47% Castro::initData() 1 0.03811 0.08019 0.1248 3.77% MultiFab::min() 10 0.01361 0.06597 0.1216 3.67% Castro::estTimeStep() 21 0.01873 0.07074 0.1115 3.36% FabArray::setVal() 143 0.06919 0.07337 0.07872 2.38% Castro::reset_internal_energy() 63 0.04887 0.04985 0.05141 1.55% FabArray::ParallelCopy_finish() 41 0.0327 0.03858 0.05047 1.52% StateData::FillBoundary(geom) 41 0.04016 0.04172 0.04594 1.39% FabArray::ParallelCopy_nowait() 41 0.04077 0.0427 0.04427 1.34% FillPatchIterator::Initialize 41 0.02429 0.03139 0.0344 1.04% Castro::normalize_species() 62 0.03207 0.03295 0.03388 1.02% Gravity::interpolate_monopole_grav() 21 0.02756 0.02778 0.02827 0.85% Castro::construct_new_gravity_source() 10 0.02302 0.02483 0.02654 0.80% Castro::do_advance_ctu() 10 0.01735 0.021 0.02469 0.75% Castro::expand_state() 10 0.01571 0.02058 0.02327 0.70% Castro::computeTemp() 63 0.01804 0.01875 0.01981 0.60% Castro::initialize_do_advance() 10 0.01379 0.01699 0.01815 0.55% MultiFab::Saxpy() 20 0.01518 0.01617 0.01707 0.52% Castro::initialize_advance() 10 0.01054 0.01253 0.01441 0.43% VisMF::Write(FabArray) 2 0.0117 0.01218 0.01429 0.43% Gravity::get_new_grav_vector() 11 0.0104 0.01159 0.01334 0.40% MultiFab::contains_nan() 20 0.01031 0.01162 0.01281 0.39% Castro::construct_old_gravity_source() 10 0.01094 0.01181 0.0127 0.38% FabArray::setDomainBndry() 41 0.00806 0.01074 0.01242 0.37% Amr::writePlotFile() 2 0.008253 0.01044 0.01106 0.33% Gravity::get_old_grav_vector() 10 0.008227 0.009552 0.01088 0.33% Amr::defBaseLevel() 1 0.006478 0.007592 0.01021 0.31% Castro::construct_new_source() 50 0.00648 0.006698 0.006934 0.21% Castro::enforce_min_density() 62 0.005809 0.006299 0.006559 0.20% StateData::define() 4 0.004273 0.004887 0.006319 0.19% main() 1 0.003494 0.003767 0.004005 0.12% Castro::swap_state_time_levels() 10 0.002925 0.003776 0.003926 0.12% Castro::finalize_do_advance() 10 0.0009556 0.001108 0.001256 0.04% Amr::coarseTimeStep() 10 0.0003133 0.0006332 0.001086 0.03% Amr::InitAmr() 1 0.0002698 0.0003355 0.0005784 0.02% Amr::timeStep() 10 0.0001747 0.0002264 0.000437 0.01% DistributionMapping::LeastUsedCPUs() 1 9.436e-06 0.000313 0.0003859 0.01% Castro::clean_state() 62 0.000133 0.0001468 0.0001556 0.00% StateDataPhysBCFunct::() 41 0.0001005 0.0001184 0.0001309 0.00% Castro::enforce_consistent_e() 1 7.665e-05 9e-05 0.0001088 0.00% Castro::construct_old_source() 50 5.471e-05 7.223e-05 8.215e-05 0.00% FabArray::ParallelCopy() 41 5.752e-05 6.716e-05 7.502e-05 0.00% Castro::finalize_advance() 10 5.246e-05 6.122e-05 7.493e-05 0.00% Castro::do_old_sources() 10 4.883e-05 6.065e-05 7.379e-05 0.00% FillPatchSingleLevel 41 5.749e-05 6.749e-05 7.277e-05 0.00% Amr::FinalizeInit() 1 4.187e-06 1.366e-05 7.204e-05 0.00% FabArrayBase::getCPC() 41 3.79e-05 5.25e-05 6.492e-05 0.00% Castro::do_new_sources() 10 5.251e-05 5.741e-05 6.244e-05 0.00% Castro::construct_old_gravity() 10 4.837e-05 5.281e-05 5.802e-05 0.00% Castro::subcycle_advance_ctu() 10 3.754e-05 4.351e-05 5.786e-05 0.00% Amr::writeSmallPlotFile() 1 2.594e-05 5.167e-05 5.702e-05 0.00% Castro::apply_source_to_state() 20 3.88e-05 4.561e-05 5.592e-05 0.00% Castro::construct_new_gravity() 10 4.261e-05 4.561e-05 4.929e-05 0.00% Castro::advance() 10 3.295e-05 3.765e-05 4.222e-05 0.00% Castro::enforce_speed_limit() 62 2.706e-05 3.135e-05 3.575e-05 0.00% Castro::check_for_nan() 20 2.534e-05 2.958e-05 3.519e-05 0.00% FabArrayBase::CPC::define() 2 2.423e-05 2.732e-05 3.123e-05 0.00% Gravity::swapTimeLevels() 10 1.119e-05 1.653e-05 2.723e-05 0.00% Castro::create_source_corrector() 10 1.629e-05 1.931e-05 2.495e-05 0.00% Amr::initSubcycle() 1 8.192e-06 1.034e-05 1.56e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.481e-06 9.126e-06 1.341e-05 0.00% Castro::post_timestep() 10 9.022e-06 9.81e-06 1.026e-05 0.00% Castro::post_init() 1 3.733e-06 4.984e-06 1.011e-05 0.00% Castro::computeNewDt() 9 6.373e-06 8.536e-06 9.932e-06 0.00% Amr::InitializeInit() 1 1.957e-06 3.585e-06 9.797e-06 0.00% Gravity::set_mass_offset() 10 7.432e-06 8.909e-06 9.702e-06 0.00% Castro::retry_advance_ctu() 10 4.853e-06 5.995e-06 7.984e-06 0.00% Castro::FluxRegFineAdd() 10 5.914e-06 6.594e-06 7.213e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.768e-06 4.916e-06 6.215e-06 0.00% Castro::computeInitialDt() 2 2.851e-06 4.167e-06 5.162e-06 0.00% Castro::post_regrid() 1 2.133e-06 3.767e-06 5.096e-06 0.00% Amr::init() 1 2.078e-06 2.8e-06 3.696e-06 0.00% Amr::initialInit() 1 1.401e-06 1.759e-06 2.326e-06 0.00% DistributionMapping::Distribute() 1 9.24e-07 1.247e-06 1.542e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.313 3.313 3.313 100.00% Amr::coarseTimeStep() 10 3.113 3.113 3.113 93.96% Amr::timeStep() 10 3.103 3.104 3.105 93.70% Castro::advance() 10 3.089 3.089 3.09 93.24% Castro::subcycle_advance_ctu() 10 3.012 3.014 3.016 91.02% Castro::do_advance_ctu() 10 3.012 3.014 3.016 91.02% Castro::construct_ctu_hydro_source() 10 2.118 2.171 2.219 66.97% Gravity::make_radial_gravity() 21 0.3288 0.3409 0.347 10.47% Gravity::get_new_grav_vector() 11 0.2225 0.2239 0.2249 6.79% Castro::construct_old_gravity() 10 0.1952 0.204 0.2089 6.31% Gravity::get_old_grav_vector() 10 0.1942 0.2031 0.2081 6.28% Castro::construct_new_gravity() 10 0.2002 0.2007 0.2014 6.08% Amr::init() 1 0.1859 0.1862 0.1863 5.62% Amr::initialInit() 1 0.173 0.1732 0.1734 5.23% FillPatchIterator::Initialize 41 0.161 0.1655 0.1706 5.15% Castro::initialize_do_advance() 10 0.1475 0.1557 0.1616 4.88% Amr::InitializeInit() 1 0.05543 0.09886 0.1467 4.43% Amr::defBaseLevel() 1 0.05543 0.09886 0.1467 4.43% FillPatchSingleLevel 41 0.1176 0.1233 0.1318 3.98% Castro::initData() 1 0.04187 0.08392 0.1282 3.87% MultiFab::min() 10 0.01361 0.06597 0.1216 3.67% Amr::FinalizeInit() 1 0.02638 0.07434 0.1179 3.56% Castro::expand_state() 10 0.105 0.1101 0.1157 3.49% Castro::estTimeStep() 21 0.01873 0.07074 0.1115 3.36% Castro::clean_state() 62 0.105 0.1071 0.1089 3.29% Castro::computeInitialDt() 2 0.001609 0.04957 0.09308 2.81% FabArray::ParallelCopy() 41 0.07553 0.08142 0.0914 2.76% FabArray::setVal() 143 0.06919 0.07337 0.07872 2.38% Castro::initialize_advance() 10 0.07341 0.07523 0.07788 2.35% Castro::computeTemp() 63 0.06719 0.0686 0.07062 2.13% Castro::do_new_sources() 10 0.05986 0.06422 0.06819 2.06% Castro::reset_internal_energy() 63 0.04887 0.04985 0.05141 1.55% FabArray::ParallelCopy_finish() 41 0.0327 0.03858 0.05047 1.52% Castro::do_old_sources() 10 0.04704 0.04753 0.04805 1.45% StateDataPhysBCFunct::() 41 0.04028 0.04184 0.04607 1.39% StateData::FillBoundary(geom) 41 0.04016 0.04172 0.04594 1.39% FabArray::ParallelCopy_nowait() 41 0.04086 0.04278 0.04435 1.34% Castro::normalize_species() 62 0.03207 0.03295 0.03388 1.02% Castro::construct_new_source() 50 0.0295 0.03153 0.03346 1.01% Gravity::interpolate_monopole_grav() 21 0.02756 0.02778 0.02827 0.85% Castro::construct_new_gravity_source() 10 0.02302 0.02483 0.02654 0.80% Castro::post_init() 1 0.02407 0.02423 0.02438 0.74% Amr::writePlotFile() 2 0.02253 0.02262 0.02276 0.69% Castro::apply_source_to_state() 20 0.01523 0.01622 0.01712 0.52% MultiFab::Saxpy() 20 0.01518 0.01617 0.01707 0.52% Castro::post_timestep() 10 0.01397 0.01433 0.01477 0.45% VisMF::Write(FabArray) 2 0.0117 0.01218 0.01429 0.43% Castro::check_for_nan() 20 0.01035 0.01165 0.01285 0.39% MultiFab::contains_nan() 20 0.01031 0.01162 0.01281 0.39% Castro::construct_old_source() 50 0.01099 0.01188 0.01278 0.39% Castro::construct_old_gravity_source() 10 0.01094 0.01181 0.0127 0.38% FabArray::setDomainBndry() 41 0.00806 0.01074 0.01242 0.37% Castro::computeNewDt() 9 0.006903 0.007713 0.008302 0.25% Castro::enforce_min_density() 62 0.005809 0.006299 0.006559 0.20% AmrLevel::AmrLevel(dm) 1 0.004281 0.004896 0.006333 0.19% StateData::define() 4 0.004273 0.004887 0.006319 0.19% Castro::swap_state_time_levels() 10 0.002925 0.003776 0.003926 0.12% Castro::post_regrid() 1 0.001384 0.001438 0.001501 0.05% Castro::finalize_do_advance() 10 0.0009556 0.001108 0.001256 0.04% Amr::InitAmr() 1 0.0002793 0.0003458 0.0005934 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.493e-05 0.0003191 0.0003934 0.01% DistributionMapping::LeastUsedCPUs() 1 9.436e-06 0.000313 0.0003859 0.01% Castro::enforce_consistent_e() 1 7.665e-05 9e-05 0.0001088 0.00% FabArrayBase::getCPC() 41 6.913e-05 7.982e-05 9.289e-05 0.00% Castro::finalize_advance() 10 5.934e-05 6.781e-05 8.215e-05 0.00% Amr::writeSmallPlotFile() 1 2.594e-05 5.167e-05 5.702e-05 0.00% Castro::enforce_speed_limit() 62 2.706e-05 3.135e-05 3.575e-05 0.00% FabArrayBase::CPC::define() 2 2.423e-05 2.732e-05 3.123e-05 0.00% Gravity::swapTimeLevels() 10 1.119e-05 1.653e-05 2.723e-05 0.00% Castro::create_source_corrector() 10 1.629e-05 1.931e-05 2.495e-05 0.00% Amr::initSubcycle() 1 8.192e-06 1.034e-05 1.56e-05 0.00% Gravity::set_mass_offset() 10 7.432e-06 8.909e-06 9.702e-06 0.00% Castro::retry_advance_ctu() 10 4.853e-06 5.995e-06 7.984e-06 0.00% Castro::FluxRegFineAdd() 10 5.914e-06 6.594e-06 7.213e-06 0.00% DistributionMapping::Distribute() 1 9.24e-07 1.247e-06 1.542e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.02-1-gbf267b095426) finalized