MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.02-2-gf79f40d4d0cb) initialized Starting run at 06:31:12 UTC on 2022-02-04. Successfully read inputs file ... Castro git describe: 22.02-1-g342411b81 AMReX git describe: 22.02-2-gf79f40d4d Microphysics git describe: 22.02 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013345695 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.340662855 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.327319235 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.315240437 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.31328152 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.31618692 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.343747518 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.298242411 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.291376894 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.289534432 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.289624232 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009602982 seconds Ending run at 06:31:15 UTC on 2022-02-04. Run time = 3.328145489 Run time without initialization = 3.138843807 Average number of zones advanced per microsecond: 0.835 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.327 ... 3.328 ... 3.328 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1130 2.1879 2.2305 67.02% Gravity::make_radial_gravity() 21 0.3359 0.3465 0.352 10.58% MultiFab::min() 10 0.01254 0.0594 0.1366 4.10% Castro::initData() 1 0.04947 0.08067 0.1224 3.68% Castro::estTimeStep() 21 0.01861 0.06781 0.0966 2.90% FabArray::setVal() 143 0.07065 0.07318 0.07781 2.34% FabArray::ParallelCopy_finish() 41 0.03398 0.03908 0.05327 1.60% Castro::reset_internal_energy() 63 0.04943 0.05033 0.05158 1.55% StateData::FillBoundary(geom) 41 0.03844 0.04204 0.04546 1.37% FabArray::ParallelCopy_nowait() 41 0.03939 0.04213 0.04369 1.31% FillPatchIterator::Initialize 41 0.02431 0.03139 0.03507 1.05% Castro::normalize_species() 62 0.03282 0.03334 0.03456 1.04% Gravity::interpolate_monopole_grav() 21 0.02764 0.0279 0.0281 0.84% Castro::construct_new_gravity_source() 10 0.02286 0.02465 0.02668 0.80% Castro::do_advance_ctu() 10 0.01866 0.02135 0.0242 0.73% Castro::expand_state() 10 0.0166 0.02026 0.02239 0.67% Castro::computeTemp() 63 0.01833 0.01892 0.01953 0.59% Castro::initialize_do_advance() 10 0.01578 0.01713 0.01829 0.55% MultiFab::Saxpy() 20 0.01564 0.01602 0.01665 0.50% VisMF::Write(FabArray) 2 0.01184 0.01236 0.0147 0.44% Castro::initialize_advance() 10 0.01077 0.01254 0.01456 0.44% Gravity::get_new_grav_vector() 11 0.01071 0.01154 0.01305 0.39% Castro::construct_old_gravity_source() 10 0.01088 0.01171 0.01237 0.37% MultiFab::contains_nan() 20 0.01059 0.01138 0.01232 0.37% FabArray::setDomainBndry() 41 0.008146 0.01061 0.01175 0.35% Amr::writePlotFile() 2 0.008484 0.01066 0.01129 0.34% Amr::defBaseLevel() 1 0.006479 0.007836 0.01107 0.33% Gravity::get_old_grav_vector() 10 0.008406 0.009457 0.01026 0.31% StateData::define() 4 0.004278 0.005048 0.007046 0.21% Castro::construct_new_source() 50 0.006525 0.006704 0.006909 0.21% Castro::enforce_min_density() 62 0.006073 0.006332 0.006552 0.20% Castro::swap_state_time_levels() 10 0.00329 0.003887 0.004301 0.13% main() 1 0.003029 0.003621 0.004158 0.12% Castro::finalize_do_advance() 10 0.000826 0.00111 0.00126 0.04% Amr::coarseTimeStep() 10 0.0004265 0.0006931 0.001255 0.04% Amr::InitAmr() 1 0.0002645 0.000353 0.0005186 0.02% Amr::timeStep() 10 0.0001631 0.0002245 0.0004979 0.01% DistributionMapping::LeastUsedCPUs() 1 8.285e-06 0.000222 0.0003271 0.01% Castro::clean_state() 62 0.0001347 0.0001531 0.0001722 0.01% StateDataPhysBCFunct::() 41 0.0001145 0.0001255 0.0001488 0.00% Castro::construct_old_source() 50 6.163e-05 8.487e-05 9.972e-05 0.00% Castro::enforce_consistent_e() 1 8.073e-05 9.276e-05 9.63e-05 0.00% FillPatchSingleLevel 41 6.287e-05 7.067e-05 8.596e-05 0.00% FabArray::ParallelCopy() 41 6.629e-05 7.302e-05 8.416e-05 0.00% Amr::writeSmallPlotFile() 1 3.157e-05 5.483e-05 7.475e-05 0.00% Castro::finalize_advance() 10 5.056e-05 5.88e-05 7.464e-05 0.00% Amr::FinalizeInit() 1 3.622e-06 1.32e-05 7.394e-05 0.00% Castro::construct_old_gravity() 10 5.602e-05 6.192e-05 7.388e-05 0.00% Castro::do_old_sources() 10 5.917e-05 6.695e-05 7.187e-05 0.00% Castro::do_new_sources() 10 6.058e-05 6.634e-05 7.147e-05 0.00% FabArrayBase::getCPC() 41 4.312e-05 5.383e-05 6.75e-05 0.00% Castro::construct_new_gravity() 10 4.157e-05 5.028e-05 6.14e-05 0.00% Castro::subcycle_advance_ctu() 10 4.326e-05 5.134e-05 5.878e-05 0.00% Castro::apply_source_to_state() 20 3.847e-05 4.721e-05 5.404e-05 0.00% Castro::enforce_speed_limit() 62 3.031e-05 3.508e-05 4.51e-05 0.00% Castro::advance() 10 3.767e-05 3.973e-05 4.163e-05 0.00% FabArrayBase::CPC::define() 2 2.131e-05 2.672e-05 3.385e-05 0.00% Castro::check_for_nan() 20 2.634e-05 2.753e-05 2.852e-05 0.00% Castro::create_source_corrector() 10 1.583e-05 1.826e-05 2.451e-05 0.00% Amr::initSubcycle() 1 8.158e-06 1.093e-05 1.793e-05 0.00% Gravity::swapTimeLevels() 10 1.323e-05 1.503e-05 1.604e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.337e-06 9.082e-06 1.451e-05 0.00% Castro::post_timestep() 10 8.269e-06 9.416e-06 1.034e-05 0.00% Gravity::set_mass_offset() 10 7.626e-06 8.257e-06 9.636e-06 0.00% Castro::post_init() 1 3.059e-06 5.012e-06 9.567e-06 0.00% Castro::computeNewDt() 9 7.873e-06 8.716e-06 9.435e-06 0.00% Amr::InitializeInit() 1 1.915e-06 2.969e-06 7.133e-06 0.00% Castro::retry_advance_ctu() 10 5.151e-06 5.788e-06 6.805e-06 0.00% Castro::FluxRegFineAdd() 10 5.704e-06 6.212e-06 6.754e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.454e-06 4.485e-06 5.615e-06 0.00% Castro::computeInitialDt() 2 2.768e-06 3.627e-06 4.911e-06 0.00% Castro::post_regrid() 1 1.839e-06 2.703e-06 4.793e-06 0.00% Amr::init() 1 1.978e-06 2.295e-06 2.654e-06 0.00% Amr::initialInit() 1 1.216e-06 1.501e-06 1.8e-06 0.00% DistributionMapping::Distribute() 1 8.95e-07 1.203e-06 1.661e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.327 3.328 3.328 100.00% Amr::coarseTimeStep() 10 3.125 3.125 3.125 93.90% Amr::timeStep() 10 3.116 3.116 3.116 93.63% Castro::advance() 10 3.101 3.101 3.102 93.19% Castro::subcycle_advance_ctu() 10 3.024 3.026 3.027 90.96% Castro::do_advance_ctu() 10 3.024 3.026 3.027 90.95% Castro::construct_ctu_hydro_source() 10 2.113 2.188 2.231 67.02% Gravity::make_radial_gravity() 21 0.3359 0.3465 0.352 10.58% Gravity::get_new_grav_vector() 11 0.2251 0.2264 0.2273 6.83% Castro::construct_old_gravity() 10 0.1989 0.2071 0.2124 6.38% Gravity::get_old_grav_vector() 10 0.198 0.2063 0.2117 6.36% Castro::construct_new_gravity() 10 0.1992 0.2001 0.2008 6.03% Amr::init() 1 0.1886 0.1888 0.1889 5.68% Amr::initialInit() 1 0.1752 0.1755 0.1757 5.28% FillPatchIterator::Initialize 41 0.1635 0.1656 0.1702 5.11% Castro::initialize_do_advance() 10 0.1507 0.1559 0.1608 4.83% Amr::InitializeInit() 1 0.06809 0.09978 0.1458 4.38% Amr::defBaseLevel() 1 0.06808 0.09977 0.1458 4.38% MultiFab::min() 10 0.01254 0.0594 0.1366 4.10% FillPatchSingleLevel 41 0.119 0.1236 0.1315 3.95% Castro::initData() 1 0.05337 0.08456 0.1259 3.78% Castro::expand_state() 10 0.1051 0.1098 0.1142 3.43% Castro::clean_state() 62 0.1062 0.1081 0.1096 3.29% Amr::FinalizeInit() 1 0.02958 0.07569 0.1071 3.22% Castro::estTimeStep() 21 0.01861 0.06781 0.0966 2.90% FabArray::ParallelCopy() 41 0.07725 0.08136 0.09284 2.79% Castro::computeInitialDt() 2 0.001709 0.04795 0.07957 2.39% FabArray::setVal() 143 0.07065 0.07318 0.07781 2.34% Castro::initialize_advance() 10 0.07422 0.07518 0.07772 2.34% Castro::computeTemp() 63 0.06779 0.06926 0.07033 2.11% Castro::do_new_sources() 10 0.06067 0.06417 0.06778 2.04% FabArray::ParallelCopy_finish() 41 0.03398 0.03908 0.05327 1.60% Castro::reset_internal_energy() 63 0.04943 0.05033 0.05158 1.55% Castro::do_old_sources() 10 0.04681 0.04773 0.0495 1.49% StateDataPhysBCFunct::() 41 0.03856 0.04217 0.04558 1.37% StateData::FillBoundary(geom) 41 0.03844 0.04204 0.04546 1.37% FabArray::ParallelCopy_nowait() 41 0.03949 0.04221 0.04376 1.31% Castro::normalize_species() 62 0.03282 0.03334 0.03456 1.04% Castro::construct_new_source() 50 0.02943 0.03135 0.03343 1.00% Gravity::interpolate_monopole_grav() 21 0.02764 0.0279 0.0281 0.84% Castro::post_init() 1 0.02698 0.02725 0.0275 0.83% Castro::construct_new_gravity_source() 10 0.02286 0.02465 0.02668 0.80% Amr::writePlotFile() 2 0.02275 0.02301 0.02334 0.70% Castro::apply_source_to_state() 20 0.01568 0.01607 0.0167 0.50% MultiFab::Saxpy() 20 0.01564 0.01602 0.01665 0.50% VisMF::Write(FabArray) 2 0.01184 0.01236 0.0147 0.44% Castro::post_timestep() 10 0.01427 0.01437 0.01454 0.44% Castro::construct_old_source() 50 0.01095 0.01179 0.01246 0.37% Castro::construct_old_gravity_source() 10 0.01088 0.01171 0.01237 0.37% Castro::check_for_nan() 20 0.01062 0.01141 0.01235 0.37% MultiFab::contains_nan() 20 0.01059 0.01138 0.01232 0.37% FabArray::setDomainBndry() 41 0.008146 0.01061 0.01175 0.35% Castro::computeNewDt() 9 0.006765 0.007319 0.0077 0.23% AmrLevel::AmrLevel(dm) 1 0.004286 0.005057 0.007057 0.21% StateData::define() 4 0.004278 0.005048 0.007046 0.21% Castro::enforce_min_density() 62 0.006073 0.006332 0.006552 0.20% Castro::swap_state_time_levels() 10 0.00329 0.003887 0.004301 0.13% Castro::post_regrid() 1 0.001383 0.001495 0.001805 0.05% Castro::finalize_do_advance() 10 0.000826 0.00111 0.00126 0.04% Amr::InitAmr() 1 0.0002726 0.0003639 0.0005359 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.427e-05 0.0002277 0.000333 0.01% DistributionMapping::LeastUsedCPUs() 1 8.285e-06 0.000222 0.0003271 0.01% FabArrayBase::getCPC() 41 6.832e-05 8.055e-05 0.0001006 0.00% Castro::enforce_consistent_e() 1 8.073e-05 9.276e-05 9.63e-05 0.00% Castro::finalize_advance() 10 5.648e-05 6.501e-05 8.057e-05 0.00% Amr::writeSmallPlotFile() 1 3.157e-05 5.483e-05 7.475e-05 0.00% Castro::enforce_speed_limit() 62 3.031e-05 3.508e-05 4.51e-05 0.00% FabArrayBase::CPC::define() 2 2.131e-05 2.672e-05 3.385e-05 0.00% Castro::create_source_corrector() 10 1.583e-05 1.826e-05 2.451e-05 0.00% Amr::initSubcycle() 1 8.158e-06 1.093e-05 1.793e-05 0.00% Gravity::swapTimeLevels() 10 1.323e-05 1.503e-05 1.604e-05 0.00% Gravity::set_mass_offset() 10 7.626e-06 8.257e-06 9.636e-06 0.00% Castro::retry_advance_ctu() 10 5.151e-06 5.788e-06 6.805e-06 0.00% Castro::FluxRegFineAdd() 10 5.704e-06 6.212e-06 6.754e-06 0.00% DistributionMapping::Distribute() 1 8.95e-07 1.203e-06 1.661e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.02-2-gf79f40d4d0cb) finalized