MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.02-4-g212ffa61c165) initialized Starting run at 06:31:38 UTC on 2022-02-07. Successfully read inputs file ... Castro git describe: 22.02-1-g342411b81 AMReX git describe: 22.02-4-g212ffa61c Microphysics git describe: 22.02 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013572058 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.336637314 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.331184803 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.312739158 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.309468784 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.310166527 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.333278104 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.296290436 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.290525528 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.289812309 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.288801323 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009797027 seconds Ending run at 06:31:41 UTC on 2022-02-07. Run time = 3.311358135 Run time without initialization = 3.112563729 Average number of zones advanced per microsecond: 0.842 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.311 ... 3.311 ... 3.311 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0959 2.1739 2.2064 66.63% Gravity::make_radial_gravity() 21 0.3328 0.3435 0.3648 11.02% MultiFab::min() 10 0.02662 0.06225 0.1447 4.37% Castro::initData() 1 0.04616 0.08442 0.1348 4.07% Castro::estTimeStep() 21 0.02449 0.07453 0.112 3.38% FabArray::setVal() 143 0.06695 0.07219 0.07674 2.32% FabArray::ParallelCopy_finish() 41 0.03197 0.03996 0.06948 2.10% Castro::reset_internal_energy() 63 0.04854 0.04979 0.05196 1.57% StateData::FillBoundary(geom) 41 0.03856 0.04195 0.04463 1.35% FabArray::ParallelCopy_nowait() 41 0.03323 0.04091 0.04388 1.33% FillPatchIterator::Initialize 41 0.02359 0.03121 0.03434 1.04% Castro::normalize_species() 62 0.03219 0.033 0.03386 1.02% Gravity::interpolate_monopole_grav() 21 0.02747 0.02804 0.0287 0.87% Castro::construct_new_gravity_source() 10 0.0202 0.02319 0.02553 0.77% Castro::do_advance_ctu() 10 0.01446 0.01976 0.02434 0.73% Castro::expand_state() 10 0.01168 0.01845 0.02136 0.65% Castro::computeTemp() 63 0.01825 0.01889 0.01955 0.59% Castro::initialize_do_advance() 10 0.01053 0.01641 0.01861 0.56% MultiFab::Saxpy() 20 0.01272 0.01471 0.01556 0.47% VisMF::Write(FabArray) 2 0.01147 0.01243 0.01497 0.45% Castro::initialize_advance() 10 0.01072 0.01251 0.01491 0.45% Gravity::get_new_grav_vector() 11 0.009975 0.01139 0.01316 0.40% Amr::writePlotFile() 2 0.008624 0.01136 0.0126 0.38% Castro::construct_old_gravity_source() 10 0.007499 0.01108 0.01183 0.36% MultiFab::contains_nan() 20 0.009921 0.01079 0.0116 0.35% FabArray::setDomainBndry() 41 0.006742 0.0102 0.01151 0.35% Gravity::get_old_grav_vector() 10 0.006836 0.009015 0.01001 0.30% Amr::defBaseLevel() 1 0.006771 0.007208 0.007379 0.22% Castro::construct_new_source() 50 0.005657 0.006355 0.006659 0.20% Castro::enforce_min_density() 62 0.005622 0.006124 0.006353 0.19% StateData::define() 4 0.00441 0.004703 0.004853 0.15% Castro::swap_state_time_levels() 10 0.002452 0.003547 0.004144 0.13% main() 1 0.003489 0.003767 0.004071 0.12% Castro::finalize_do_advance() 10 0.0004678 0.0008408 0.001003 0.03% Amr::coarseTimeStep() 10 0.0002974 0.0005496 0.000844 0.03% Amr::InitAmr() 1 0.0002663 0.0003573 0.0005771 0.02% Amr::timeStep() 10 0.0001675 0.0002265 0.000449 0.01% DistributionMapping::LeastUsedCPUs() 1 1.879e-05 0.0002555 0.0003652 0.01% Castro::clean_state() 62 0.000134 0.0001479 0.0001718 0.01% StateDataPhysBCFunct::() 41 0.0001194 0.0001344 0.0001599 0.00% Castro::enforce_consistent_e() 1 7.946e-05 9.365e-05 0.0001021 0.00% Castro::construct_old_source() 50 7.775e-05 8.732e-05 0.0001019 0.00% FillPatchSingleLevel 41 6.167e-05 6.749e-05 8.148e-05 0.00% Castro::do_new_sources() 10 5.681e-05 6.557e-05 7.763e-05 0.00% Castro::do_old_sources() 10 5.96e-05 6.692e-05 7.756e-05 0.00% FabArray::ParallelCopy() 41 6.333e-05 6.846e-05 7.515e-05 0.00% Castro::construct_old_gravity() 10 5.302e-05 5.977e-05 7.35e-05 0.00% FabArrayBase::getCPC() 41 4.837e-05 6.088e-05 7.232e-05 0.00% Amr::writeSmallPlotFile() 1 2.533e-05 5.496e-05 6.885e-05 0.00% Amr::FinalizeInit() 1 3.989e-06 1.259e-05 6.832e-05 0.00% Castro::apply_source_to_state() 20 4.284e-05 5.19e-05 6.736e-05 0.00% Castro::subcycle_advance_ctu() 10 4.944e-05 5.823e-05 6.553e-05 0.00% Castro::construct_new_gravity() 10 4.072e-05 4.957e-05 5.952e-05 0.00% Castro::finalize_advance() 10 4.727e-05 5.104e-05 5.703e-05 0.00% Castro::advance() 10 3.604e-05 4.242e-05 4.72e-05 0.00% Castro::enforce_speed_limit() 62 2.924e-05 3.271e-05 3.927e-05 0.00% FabArrayBase::CPC::define() 2 2.368e-05 2.662e-05 3.437e-05 0.00% Castro::check_for_nan() 20 2.493e-05 2.655e-05 2.884e-05 0.00% Amr::initSubcycle() 1 8.568e-06 1.133e-05 2.458e-05 0.00% Castro::create_source_corrector() 10 1.506e-05 1.693e-05 1.885e-05 0.00% Gravity::swapTimeLevels() 10 1.302e-05 1.587e-05 1.772e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.633e-06 9.069e-06 1.381e-05 0.00% Castro::FluxRegFineAdd() 10 5.883e-06 9.45e-06 1.226e-05 0.00% Castro::post_init() 1 2.904e-06 5.845e-06 1.05e-05 0.00% Castro::post_timestep() 10 7.819e-06 9.15e-06 9.97e-06 0.00% Gravity::set_mass_offset() 10 6.732e-06 8.088e-06 9.951e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.064e-06 5.153e-06 9.367e-06 0.00% Castro::computeNewDt() 9 7.552e-06 8.284e-06 9.102e-06 0.00% Castro::retry_advance_ctu() 10 5.302e-06 6.061e-06 6.873e-06 0.00% Amr::InitializeInit() 1 1.95e-06 3.026e-06 5.888e-06 0.00% Castro::computeInitialDt() 2 3.005e-06 3.761e-06 4.521e-06 0.00% Castro::post_regrid() 1 2.014e-06 3.193e-06 3.998e-06 0.00% Amr::init() 1 1.822e-06 2.34e-06 3.022e-06 0.00% DistributionMapping::Distribute() 1 9.93e-07 1.281e-06 2.58e-06 0.00% Amr::initialInit() 1 1.253e-06 1.567e-06 1.862e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.311 3.311 3.311 100.00% Amr::coarseTimeStep() 10 3.099 3.099 3.099 93.58% Amr::timeStep() 10 3.089 3.089 3.09 93.32% Castro::advance() 10 3.074 3.075 3.075 92.86% Castro::subcycle_advance_ctu() 10 2.997 3 3.002 90.65% Castro::do_advance_ctu() 10 2.997 3 3.002 90.65% Castro::construct_ctu_hydro_source() 10 2.096 2.174 2.206 66.63% Gravity::make_radial_gravity() 21 0.3328 0.3435 0.3648 11.02% Castro::construct_old_gravity() 10 0.1989 0.2076 0.225 6.80% Gravity::get_old_grav_vector() 10 0.1981 0.2068 0.2244 6.78% Gravity::get_new_grav_vector() 11 0.2212 0.222 0.2227 6.73% Amr::init() 1 0.1981 0.1983 0.1984 5.99% Castro::construct_new_gravity() 10 0.1951 0.1956 0.1965 5.93% Amr::initialInit() 1 0.1839 0.1844 0.1846 5.57% FillPatchIterator::Initialize 41 0.1586 0.1646 0.172 5.19% Castro::initialize_do_advance() 10 0.1395 0.1523 0.1578 4.77% Amr::InitializeInit() 1 0.06586 0.1034 0.1546 4.67% Amr::defBaseLevel() 1 0.06586 0.1034 0.1546 4.67% MultiFab::min() 10 0.02662 0.06225 0.1447 4.37% FillPatchSingleLevel 41 0.1165 0.1232 0.1417 4.28% Castro::initData() 1 0.05049 0.08852 0.1392 4.20% Amr::FinalizeInit() 1 0.02991 0.08096 0.1182 3.57% Castro::estTimeStep() 21 0.02449 0.07453 0.112 3.38% Castro::expand_state() 10 0.1013 0.1073 0.1115 3.37% Castro::clean_state() 62 0.1043 0.107 0.11 3.32% FabArray::ParallelCopy() 41 0.07503 0.08103 0.1029 3.11% Castro::computeInitialDt() 2 0.00193 0.05309 0.09062 2.74% Castro::initialize_advance() 10 0.07296 0.07445 0.07785 2.35% FabArray::setVal() 143 0.06695 0.07219 0.07674 2.32% Castro::computeTemp() 63 0.06679 0.06867 0.07151 2.16% FabArray::ParallelCopy_finish() 41 0.03197 0.03996 0.06948 2.10% Castro::do_new_sources() 10 0.05509 0.06081 0.0654 1.98% Castro::reset_internal_energy() 63 0.04854 0.04979 0.05196 1.57% Castro::do_old_sources() 10 0.03924 0.04565 0.04691 1.42% StateDataPhysBCFunct::() 41 0.03872 0.04208 0.04477 1.35% StateData::FillBoundary(geom) 41 0.03856 0.04195 0.04463 1.35% FabArray::ParallelCopy_nowait() 41 0.03333 0.04099 0.04397 1.33% Castro::normalize_species() 62 0.03219 0.033 0.03386 1.02% Castro::construct_new_source() 50 0.02586 0.02954 0.03215 0.97% Gravity::interpolate_monopole_grav() 21 0.02747 0.02804 0.0287 0.87% Castro::post_init() 1 0.02703 0.02733 0.02755 0.83% Castro::construct_new_gravity_source() 10 0.0202 0.02319 0.02553 0.77% Amr::writePlotFile() 2 0.0236 0.02379 0.02412 0.73% Castro::apply_source_to_state() 20 0.01279 0.01476 0.01561 0.47% MultiFab::Saxpy() 20 0.01272 0.01471 0.01556 0.47% Castro::post_timestep() 10 0.0137 0.0144 0.01503 0.45% VisMF::Write(FabArray) 2 0.01147 0.01243 0.01497 0.45% Castro::construct_old_source() 50 0.007577 0.01116 0.01193 0.36% Castro::construct_old_gravity_source() 10 0.007499 0.01108 0.01183 0.36% Castro::check_for_nan() 20 0.009949 0.01082 0.01163 0.35% MultiFab::contains_nan() 20 0.009921 0.01079 0.0116 0.35% FabArray::setDomainBndry() 41 0.006742 0.0102 0.01151 0.35% Castro::computeNewDt() 9 0.006872 0.007843 0.008654 0.26% Castro::enforce_min_density() 62 0.005622 0.006124 0.006353 0.19% AmrLevel::AmrLevel(dm) 1 0.004418 0.004712 0.004867 0.15% StateData::define() 4 0.00441 0.004703 0.004853 0.15% Castro::swap_state_time_levels() 10 0.002452 0.003547 0.004144 0.13% Castro::post_regrid() 1 0.001407 0.001531 0.001758 0.05% Castro::finalize_do_advance() 10 0.0004678 0.0008408 0.001003 0.03% Amr::InitAmr() 1 0.0002749 0.0003686 0.0006017 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 3.074e-05 0.000262 0.0003717 0.01% DistributionMapping::LeastUsedCPUs() 1 1.879e-05 0.0002555 0.0003652 0.01% Castro::enforce_consistent_e() 1 7.946e-05 9.365e-05 0.0001021 0.00% FabArrayBase::getCPC() 41 7.326e-05 8.75e-05 9.789e-05 0.00% Amr::writeSmallPlotFile() 1 2.533e-05 5.496e-05 6.885e-05 0.00% Castro::finalize_advance() 10 5.472e-05 6.049e-05 6.347e-05 0.00% Castro::enforce_speed_limit() 62 2.924e-05 3.271e-05 3.927e-05 0.00% FabArrayBase::CPC::define() 2 2.368e-05 2.662e-05 3.437e-05 0.00% Amr::initSubcycle() 1 8.568e-06 1.133e-05 2.458e-05 0.00% Castro::create_source_corrector() 10 1.506e-05 1.693e-05 1.885e-05 0.00% Gravity::swapTimeLevels() 10 1.302e-05 1.587e-05 1.772e-05 0.00% Castro::FluxRegFineAdd() 10 5.883e-06 9.45e-06 1.226e-05 0.00% Gravity::set_mass_offset() 10 6.732e-06 8.088e-06 9.951e-06 0.00% Castro::retry_advance_ctu() 10 5.302e-06 6.061e-06 6.873e-06 0.00% DistributionMapping::Distribute() 1 9.93e-07 1.281e-06 2.58e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.02-4-g212ffa61c165) finalized