MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.02-5-g3fb8caaf78a0) initialized Starting run at 06:31:10 UTC on 2022-02-08. Successfully read inputs file ... Castro git describe: 22.02-3-g186ee03f5 AMReX git describe: 22.02-5-g3fb8caaf7 Microphysics git describe: 22.02 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012929128 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.332957875 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.319403806 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.316983983 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.312390464 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.316228057 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.334261359 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.299475786 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.296222165 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.295016603 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.294158909 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.043791524 seconds Ending run at 06:31:13 UTC on 2022-02-08. Run time = 3.338419206 Run time without initialization = 3.164109659 Average number of zones advanced per microsecond: 0.828 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.338 ... 3.338 ... 3.338 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1107 2.1707 2.2322 66.86% Gravity::make_radial_gravity() 21 0.3391 0.3488 0.3687 11.04% MultiFab::min() 10 0.01743 0.07607 0.1397 4.19% Castro::initData() 1 0.04598 0.07871 0.1135 3.40% Castro::estTimeStep() 21 0.01991 0.05932 0.08754 2.62% FabArray::ParallelCopy_finish() 41 0.03156 0.04295 0.07974 2.39% FabArray::setVal() 143 0.06145 0.06953 0.07463 2.24% Castro::reset_internal_energy() 63 0.04825 0.05015 0.05191 1.56% Amr::writePlotFile() 2 0.04239 0.04469 0.04597 1.38% StateData::FillBoundary(geom) 41 0.03759 0.04184 0.04544 1.36% FabArray::ParallelCopy_nowait() 41 0.03433 0.04037 0.04239 1.27% Castro::normalize_species() 62 0.03275 0.03346 0.03499 1.05% FillPatchIterator::Initialize 41 0.02272 0.03049 0.03341 1.00% Gravity::interpolate_monopole_grav() 21 0.02757 0.02821 0.02866 0.86% Castro::construct_new_gravity_source() 10 0.02027 0.02357 0.02646 0.79% Castro::do_advance_ctu() 10 0.01467 0.01959 0.02402 0.72% Castro::expand_state() 10 0.01179 0.01859 0.02105 0.63% Castro::computeTemp() 63 0.01814 0.01887 0.01966 0.59% Castro::initialize_do_advance() 10 0.009999 0.01649 0.01816 0.54% MultiFab::Saxpy() 20 0.01274 0.01472 0.01612 0.48% VisMF::Write(FabArray) 2 0.01116 0.01239 0.01461 0.44% Castro::initialize_advance() 10 0.008097 0.01144 0.01391 0.42% Gravity::get_new_grav_vector() 11 0.009612 0.011 0.01338 0.40% Castro::construct_old_gravity_source() 10 0.007404 0.01103 0.01209 0.36% MultiFab::contains_nan() 20 0.01002 0.0107 0.01167 0.35% FabArray::setDomainBndry() 41 0.006866 0.01016 0.01157 0.35% Gravity::get_old_grav_vector() 10 0.006899 0.008968 0.01029 0.31% Amr::defBaseLevel() 1 0.006596 0.007067 0.007987 0.24% Castro::construct_new_source() 50 0.005754 0.006341 0.006634 0.20% Castro::enforce_min_density() 62 0.00569 0.006135 0.006517 0.20% StateData::define() 4 0.004359 0.004555 0.004866 0.15% main() 1 0.003665 0.004003 0.004275 0.13% Castro::swap_state_time_levels() 10 0.002517 0.003534 0.004176 0.13% Amr::coarseTimeStep() 10 0.0003318 0.0007778 0.002234 0.07% Castro::finalize_do_advance() 10 0.0004163 0.001119 0.001388 0.04% Amr::timeStep() 10 0.0001683 0.0002251 0.0004506 0.01% Amr::InitAmr() 1 0.0002769 0.0003058 0.0004238 0.01% Castro::clean_state() 62 0.000131 0.0001412 0.0001631 0.00% DistributionMapping::LeastUsedCPUs() 1 8.412e-06 0.0001326 0.000154 0.00% StateDataPhysBCFunct::() 41 0.0001046 0.0001293 0.0001503 0.00% Castro::enforce_consistent_e() 1 7.535e-05 8.831e-05 9.478e-05 0.00% Castro::construct_old_source() 50 4.947e-05 7.365e-05 9.382e-05 0.00% FabArrayBase::getCPC() 41 3.825e-05 5.473e-05 7.207e-05 0.00% Amr::writeSmallPlotFile() 1 2.565e-05 5.036e-05 6.964e-05 0.00% FabArray::ParallelCopy() 41 5.592e-05 6.237e-05 6.902e-05 0.00% Amr::FinalizeInit() 1 4.095e-06 1.358e-05 6.767e-05 0.00% FillPatchSingleLevel 41 5.801e-05 6.272e-05 6.7e-05 0.00% Castro::do_new_sources() 10 5.054e-05 5.753e-05 6.489e-05 0.00% Castro::do_old_sources() 10 4.84e-05 5.734e-05 6.435e-05 0.00% Castro::subcycle_advance_ctu() 10 4.177e-05 5.196e-05 6.187e-05 0.00% Castro::finalize_advance() 10 5.301e-05 5.506e-05 5.688e-05 0.00% Castro::construct_old_gravity() 10 4.647e-05 5.222e-05 5.502e-05 0.00% Castro::apply_source_to_state() 20 3.896e-05 4.674e-05 5.273e-05 0.00% Castro::advance() 10 2.959e-05 3.99e-05 5.189e-05 0.00% Castro::construct_new_gravity() 10 4.119e-05 4.603e-05 5.099e-05 0.00% Castro::enforce_speed_limit() 62 2.892e-05 3.211e-05 3.627e-05 0.00% FabArrayBase::CPC::define() 2 2.386e-05 2.546e-05 2.73e-05 0.00% Castro::check_for_nan() 20 2.144e-05 2.456e-05 2.629e-05 0.00% Gravity::swapTimeLevels() 10 8.625e-06 1.323e-05 2.621e-05 0.00% Castro::create_source_corrector() 10 1.508e-05 1.748e-05 2.02e-05 0.00% Castro::post_timestep() 10 8.221e-06 1.151e-05 1.893e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.659e-06 1.073e-05 1.36e-05 0.00% Castro::post_init() 1 3.376e-06 4.719e-06 9.991e-06 0.00% Amr::initSubcycle() 1 8.154e-06 8.959e-06 9.59e-06 0.00% Castro::computeNewDt() 9 6.869e-06 7.689e-06 9.086e-06 0.00% Gravity::set_mass_offset() 10 6.798e-06 7.862e-06 9.033e-06 0.00% Castro::FluxRegFineAdd() 10 5.302e-06 6.209e-06 7.259e-06 0.00% Castro::retry_advance_ctu() 10 5.391e-06 6.08e-06 7.156e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.499e-06 4.372e-06 6.656e-06 0.00% Amr::InitializeInit() 1 1.811e-06 2.678e-06 5.576e-06 0.00% Castro::computeInitialDt() 2 3.902e-06 4.548e-06 5.384e-06 0.00% Castro::post_regrid() 1 2.128e-06 3.447e-06 5.158e-06 0.00% Amr::init() 1 2.002e-06 2.42e-06 2.694e-06 0.00% Amr::initialInit() 1 1.269e-06 1.531e-06 1.763e-06 0.00% DistributionMapping::Distribute() 1 8.93e-07 1.031e-06 1.2e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.338 3.338 3.338 100.00% Amr::coarseTimeStep() 10 3.116 3.116 3.116 93.34% Amr::timeStep() 10 3.106 3.106 3.108 93.08% Castro::advance() 10 3.091 3.092 3.092 92.61% Castro::subcycle_advance_ctu() 10 3.017 3.02 3.03 90.76% Castro::do_advance_ctu() 10 3.017 3.02 3.03 90.76% Castro::construct_ctu_hydro_source() 10 2.111 2.171 2.232 66.86% Gravity::make_radial_gravity() 21 0.3391 0.3488 0.3687 11.04% Gravity::get_new_grav_vector() 11 0.2257 0.2268 0.2274 6.81% Castro::construct_old_gravity() 10 0.2003 0.2079 0.2251 6.74% Gravity::get_old_grav_vector() 10 0.1995 0.2071 0.2244 6.72% Castro::construct_new_gravity() 10 0.1992 0.2006 0.2016 6.04% FillPatchIterator::Initialize 41 0.1576 0.1661 0.1839 5.51% Amr::init() 1 0.1737 0.1738 0.1739 5.21% Amr::initialInit() 1 0.1606 0.1607 0.161 4.82% Castro::initialize_do_advance() 10 0.144 0.1541 0.1593 4.77% FillPatchSingleLevel 41 0.1174 0.1255 0.1543 4.62% MultiFab::min() 10 0.01743 0.07607 0.1397 4.19% Amr::InitializeInit() 1 0.06516 0.09682 0.1313 3.93% Amr::defBaseLevel() 1 0.06516 0.09682 0.1313 3.93% Castro::initData() 1 0.04979 0.08259 0.1177 3.52% FabArray::ParallelCopy() 41 0.07407 0.08345 0.1142 3.42% Castro::expand_state() 10 0.09859 0.1089 0.1133 3.39% Castro::clean_state() 62 0.1048 0.1079 0.1106 3.31% Amr::FinalizeInit() 1 0.02933 0.06384 0.09579 2.87% Castro::estTimeStep() 21 0.01991 0.05932 0.08754 2.62% FabArray::ParallelCopy_finish() 41 0.03156 0.04295 0.07974 2.39% FabArray::setVal() 143 0.06145 0.06953 0.07463 2.24% Castro::initialize_advance() 10 0.06076 0.07099 0.0746 2.23% Castro::computeTemp() 63 0.06639 0.06902 0.07158 2.14% Castro::computeInitialDt() 2 0.001711 0.03617 0.06783 2.03% Castro::do_new_sources() 10 0.0556 0.06164 0.06708 2.01% Amr::writePlotFile() 2 0.05678 0.05708 0.0572 1.71% Castro::reset_internal_energy() 63 0.04825 0.05015 0.05191 1.56% Castro::do_old_sources() 10 0.03988 0.04559 0.04686 1.40% StateDataPhysBCFunct::() 41 0.03771 0.04197 0.04555 1.36% StateData::FillBoundary(geom) 41 0.03759 0.04184 0.04544 1.36% FabArray::ParallelCopy_nowait() 41 0.03443 0.04045 0.04246 1.27% Castro::normalize_species() 62 0.03275 0.03346 0.03499 1.05% Castro::construct_new_source() 50 0.02602 0.02992 0.03291 0.99% Gravity::interpolate_monopole_grav() 21 0.02757 0.02821 0.02866 0.86% Castro::post_init() 1 0.02702 0.0271 0.02717 0.81% Castro::construct_new_gravity_source() 10 0.02027 0.02357 0.02646 0.79% Castro::apply_source_to_state() 20 0.01279 0.01477 0.01616 0.48% MultiFab::Saxpy() 20 0.01274 0.01472 0.01612 0.48% Castro::post_timestep() 10 0.01391 0.01465 0.01552 0.47% VisMF::Write(FabArray) 2 0.01116 0.01239 0.01461 0.44% Castro::construct_old_source() 50 0.007453 0.01111 0.01218 0.36% Castro::construct_old_gravity_source() 10 0.007404 0.01103 0.01209 0.36% Castro::check_for_nan() 20 0.01004 0.01072 0.01169 0.35% MultiFab::contains_nan() 20 0.01002 0.0107 0.01167 0.35% FabArray::setDomainBndry() 41 0.006866 0.01016 0.01157 0.35% Castro::computeNewDt() 9 0.006894 0.007965 0.009 0.27% Castro::enforce_min_density() 62 0.00569 0.006135 0.006517 0.20% AmrLevel::AmrLevel(dm) 1 0.004367 0.004566 0.004876 0.15% StateData::define() 4 0.004359 0.004555 0.004866 0.15% Castro::swap_state_time_levels() 10 0.002517 0.003534 0.004176 0.13% Castro::post_regrid() 1 0.001392 0.001482 0.001712 0.05% Castro::finalize_do_advance() 10 0.0004163 0.001119 0.001388 0.04% Amr::InitAmr() 1 0.0002855 0.0003148 0.0004333 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.395e-05 0.000138 0.0001619 0.00% DistributionMapping::LeastUsedCPUs() 1 8.412e-06 0.0001326 0.000154 0.00% FabArrayBase::getCPC() 41 6.555e-05 8.019e-05 9.874e-05 0.00% Castro::enforce_consistent_e() 1 7.535e-05 8.831e-05 9.478e-05 0.00% Amr::writeSmallPlotFile() 1 2.565e-05 5.036e-05 6.964e-05 0.00% Castro::finalize_advance() 10 5.942e-05 6.127e-05 6.34e-05 0.00% Castro::enforce_speed_limit() 62 2.892e-05 3.211e-05 3.627e-05 0.00% FabArrayBase::CPC::define() 2 2.386e-05 2.546e-05 2.73e-05 0.00% Gravity::swapTimeLevels() 10 8.625e-06 1.323e-05 2.621e-05 0.00% Castro::create_source_corrector() 10 1.508e-05 1.748e-05 2.02e-05 0.00% Amr::initSubcycle() 1 8.154e-06 8.959e-06 9.59e-06 0.00% Gravity::set_mass_offset() 10 6.798e-06 7.862e-06 9.033e-06 0.00% Castro::FluxRegFineAdd() 10 5.302e-06 6.209e-06 7.259e-06 0.00% Castro::retry_advance_ctu() 10 5.391e-06 6.08e-06 7.156e-06 0.00% DistributionMapping::Distribute() 1 8.93e-07 1.031e-06 1.2e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.02-5-g3fb8caaf78a0) finalized