MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.02-7-g9558c8a1684c) initialized Starting run at 06:31:35 UTC on 2022-02-09. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.02-7-g9558c8a16 Microphysics git describe: 22.02 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012643635 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.340512337 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.325114481 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.314538503 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.313058323 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.313945548 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.338092253 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.298161456 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.291182862 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.292351357 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.292769655 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.055670577 seconds Ending run at 06:31:38 UTC on 2022-02-09. Run time = 3.353995657 Run time without initialization = 3.179046966 Average number of zones advanced per microsecond: 0.825 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.354 ... 3.354 ... 3.354 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1160 2.1833 2.2258 66.36% Gravity::make_radial_gravity() 21 0.3327 0.3444 0.3564 10.63% MultiFab::min() 10 0.013 0.05718 0.1281 3.82% Castro::initData() 1 0.03842 0.07882 0.1163 3.47% Castro::estTimeStep() 21 0.01765 0.06085 0.1063 3.17% FabArray::setVal() 143 0.06987 0.07431 0.07972 2.38% Amr::writePlotFile() 2 0.05472 0.05681 0.05746 1.71% Castro::reset_internal_energy() 63 0.04858 0.05027 0.05155 1.54% FabArray::ParallelCopy_finish() 41 0.03158 0.03753 0.0498 1.48% StateData::FillBoundary(geom) 41 0.03833 0.04217 0.04606 1.37% FabArray::ParallelCopy_nowait() 41 0.03965 0.04269 0.04473 1.33% FillPatchIterator::Initialize 41 0.02412 0.03143 0.03492 1.04% Castro::normalize_species() 62 0.03281 0.0332 0.0336 1.00% Gravity::interpolate_monopole_grav() 21 0.02753 0.0281 0.02874 0.86% Castro::construct_new_gravity_source() 10 0.02306 0.02498 0.02679 0.80% Castro::do_advance_ctu() 10 0.01822 0.02117 0.02508 0.75% Castro::expand_state() 10 0.01391 0.01942 0.02254 0.67% Castro::computeTemp() 63 0.01821 0.01877 0.01987 0.59% Castro::initialize_do_advance() 10 0.01481 0.0172 0.01804 0.54% MultiFab::Saxpy() 20 0.01506 0.01604 0.01653 0.49% Castro::initialize_advance() 10 0.01079 0.01249 0.01444 0.43% VisMF::Write(FabArray) 2 0.01146 0.01187 0.01391 0.41% Gravity::get_new_grav_vector() 11 0.01065 0.01172 0.01369 0.41% Castro::construct_old_gravity_source() 10 0.01113 0.01186 0.01245 0.37% MultiFab::contains_nan() 20 0.01034 0.01124 0.01217 0.36% FabArray::setDomainBndry() 41 0.007636 0.01081 0.01216 0.36% Gravity::get_old_grav_vector() 10 0.00836 0.009483 0.01088 0.32% Amr::defBaseLevel() 1 0.006534 0.007006 0.008094 0.24% Castro::construct_new_source() 50 0.006424 0.006699 0.006974 0.21% Castro::enforce_min_density() 62 0.005931 0.006235 0.00644 0.19% StateData::define() 4 0.004278 0.004509 0.004845 0.14% main() 1 0.003444 0.003657 0.003937 0.12% Castro::swap_state_time_levels() 10 0.002992 0.003805 0.003937 0.12% Amr::coarseTimeStep() 10 0.0004481 0.000718 0.001261 0.04% Castro::finalize_do_advance() 10 0.0009561 0.001086 0.001241 0.04% Amr::timeStep() 10 0.0001584 0.0002231 0.0004915 0.01% Amr::InitAmr() 1 0.0002574 0.000288 0.0003632 0.01% Castro::clean_state() 62 0.0001297 0.0001462 0.0001583 0.00% StateDataPhysBCFunct::() 41 0.0001211 0.0001342 0.0001426 0.00% DistributionMapping::LeastUsedCPUs() 1 6.426e-06 8.371e-05 0.0001164 0.00% Castro::construct_old_source() 50 6.713e-05 8.596e-05 0.0001034 0.00% Amr::FinalizeInit() 1 3.981e-06 1.616e-05 9.557e-05 0.00% Castro::enforce_consistent_e() 1 7.829e-05 8.591e-05 9.191e-05 0.00% FillPatchSingleLevel 41 6.24e-05 6.714e-05 7.863e-05 0.00% FabArray::ParallelCopy() 41 6.947e-05 7.313e-05 7.823e-05 0.00% Castro::do_old_sources() 10 5.664e-05 6.595e-05 7.698e-05 0.00% FabArrayBase::getCPC() 41 5.068e-05 5.922e-05 7.403e-05 0.00% Castro::do_new_sources() 10 5.763e-05 6.445e-05 7.401e-05 0.00% Amr::writeSmallPlotFile() 1 2.601e-05 5.088e-05 7.343e-05 0.00% Castro::construct_old_gravity() 10 5.619e-05 6.226e-05 7.333e-05 0.00% Castro::subcycle_advance_ctu() 10 4.104e-05 5.537e-05 6.533e-05 0.00% Castro::construct_new_gravity() 10 4.142e-05 5.194e-05 6.417e-05 0.00% Castro::apply_source_to_state() 20 4.492e-05 5.328e-05 6.035e-05 0.00% Castro::finalize_advance() 10 4.722e-05 5.257e-05 5.786e-05 0.00% Castro::advance() 10 3.506e-05 4.086e-05 5.06e-05 0.00% Castro::enforce_speed_limit() 62 2.91e-05 3.221e-05 3.727e-05 0.00% FabArrayBase::CPC::define() 2 2.363e-05 2.78e-05 3.378e-05 0.00% Castro::check_for_nan() 20 2.376e-05 2.719e-05 2.986e-05 0.00% Gravity::swapTimeLevels() 10 1.368e-05 1.735e-05 2.598e-05 0.00% Castro::create_source_corrector() 10 1.39e-05 1.743e-05 2.016e-05 0.00% Amr::initSubcycle() 1 8.073e-06 9.593e-06 1.413e-05 0.00% Castro::post_init() 1 3.314e-06 4.611e-06 1.182e-05 0.00% Castro::post_timestep() 10 8.507e-06 9.912e-06 1.075e-05 0.00% Gravity::set_mass_offset() 10 6.319e-06 7.895e-06 9.069e-06 0.00% AmrLevel::AmrLevel(dm) 1 7.884e-06 8.355e-06 8.957e-06 0.00% Castro::FluxRegFineAdd() 10 5.414e-06 6.556e-06 8.248e-06 0.00% Castro::computeNewDt() 9 6.459e-06 7.436e-06 8.164e-06 0.00% Castro::retry_advance_ctu() 10 5.02e-06 5.728e-06 6.589e-06 0.00% Amr::InitializeInit() 1 1.849e-06 2.749e-06 6.409e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.405e-06 4.211e-06 5.387e-06 0.00% Castro::computeInitialDt() 2 2.759e-06 3.794e-06 5.125e-06 0.00% Castro::post_regrid() 1 1.965e-06 3.157e-06 4.823e-06 0.00% Amr::init() 1 1.703e-06 2.367e-06 2.941e-06 0.00% Amr::initialInit() 1 1.085e-06 1.633e-06 2.363e-06 0.00% DistributionMapping::Distribute() 1 9.06e-07 1.057e-06 1.298e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.354 3.354 3.354 100.00% Amr::coarseTimeStep() 10 3.12 3.12 3.12 93.01% Amr::timeStep() 10 3.11 3.11 3.11 92.73% Castro::advance() 10 3.095 3.095 3.096 92.29% Castro::subcycle_advance_ctu() 10 3.018 3.02 3.021 90.08% Castro::do_advance_ctu() 10 3.018 3.02 3.021 90.08% Castro::construct_ctu_hydro_source() 10 2.116 2.183 2.226 66.36% Gravity::make_radial_gravity() 21 0.3327 0.3444 0.3564 10.63% Gravity::get_new_grav_vector() 11 0.2241 0.2252 0.2262 6.74% Castro::construct_old_gravity() 10 0.1979 0.2064 0.2173 6.48% Gravity::get_old_grav_vector() 10 0.197 0.2056 0.2165 6.45% Castro::construct_new_gravity() 10 0.2012 0.2018 0.2028 6.05% Amr::init() 1 0.1744 0.1745 0.1745 5.20% FillPatchIterator::Initialize 41 0.1599 0.165 0.1716 5.12% Amr::initialInit() 1 0.1613 0.1616 0.1618 4.82% Castro::initialize_do_advance() 10 0.1445 0.155 0.1611 4.80% Amr::InitializeInit() 1 0.05598 0.09671 0.135 4.03% Amr::defBaseLevel() 1 0.05598 0.0967 0.135 4.03% FillPatchSingleLevel 41 0.1179 0.1227 0.1285 3.83% MultiFab::min() 10 0.013 0.05718 0.1281 3.82% Castro::initData() 1 0.0425 0.08263 0.1196 3.57% Castro::expand_state() 10 0.1006 0.1089 0.1152 3.44% Castro::clean_state() 62 0.1057 0.1077 0.1095 3.26% Castro::estTimeStep() 21 0.01765 0.06085 0.1063 3.17% Amr::FinalizeInit() 1 0.02632 0.06486 0.1058 3.15% FabArray::ParallelCopy() 41 0.07574 0.08038 0.08963 2.67% Castro::computeInitialDt() 2 0.001871 0.04017 0.08093 2.41% FabArray::setVal() 143 0.06987 0.07431 0.07972 2.38% Castro::initialize_advance() 10 0.07384 0.0752 0.07741 2.31% Castro::computeTemp() 63 0.06722 0.06904 0.071 2.12% Castro::do_new_sources() 10 0.06062 0.06497 0.06913 2.06% Amr::writePlotFile() 2 0.06851 0.06868 0.06892 2.05% Castro::reset_internal_energy() 63 0.04858 0.05027 0.05155 1.54% FabArray::ParallelCopy_finish() 41 0.03158 0.03753 0.0498 1.48% Castro::do_old_sources() 10 0.04714 0.0478 0.04886 1.46% StateDataPhysBCFunct::() 41 0.03847 0.0423 0.0462 1.38% StateData::FillBoundary(geom) 41 0.03833 0.04217 0.04606 1.37% FabArray::ParallelCopy_nowait() 41 0.03975 0.04278 0.04481 1.34% Castro::construct_new_source() 50 0.02964 0.03167 0.03377 1.01% Castro::normalize_species() 62 0.03281 0.0332 0.0336 1.00% Gravity::interpolate_monopole_grav() 21 0.02753 0.0281 0.02874 0.86% Castro::construct_new_gravity_source() 10 0.02306 0.02498 0.02679 0.80% Castro::post_init() 1 0.02424 0.02439 0.02451 0.73% Castro::apply_source_to_state() 20 0.01512 0.01609 0.01659 0.49% MultiFab::Saxpy() 20 0.01506 0.01604 0.01653 0.49% Castro::post_timestep() 10 0.01405 0.01424 0.01442 0.43% VisMF::Write(FabArray) 2 0.01146 0.01187 0.01391 0.41% Castro::construct_old_source() 50 0.01119 0.01195 0.01255 0.37% Castro::construct_old_gravity_source() 10 0.01113 0.01186 0.01245 0.37% Castro::check_for_nan() 20 0.01037 0.01126 0.01219 0.36% MultiFab::contains_nan() 20 0.01034 0.01124 0.01217 0.36% FabArray::setDomainBndry() 41 0.007636 0.01081 0.01216 0.36% Castro::computeNewDt() 9 0.006965 0.00776 0.008232 0.25% Castro::enforce_min_density() 62 0.005931 0.006235 0.00644 0.19% AmrLevel::AmrLevel(dm) 1 0.004286 0.004518 0.004853 0.14% StateData::define() 4 0.004278 0.004509 0.004845 0.14% Castro::swap_state_time_levels() 10 0.002992 0.003805 0.003937 0.12% Castro::post_regrid() 1 0.001376 0.001452 0.00152 0.05% Castro::finalize_do_advance() 10 0.0009561 0.001086 0.001241 0.04% Amr::InitAmr() 1 0.0002664 0.0002976 0.0003712 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.074e-05 8.898e-05 0.0001231 0.00% DistributionMapping::LeastUsedCPUs() 1 6.426e-06 8.371e-05 0.0001164 0.00% FabArrayBase::getCPC() 41 7.673e-05 8.703e-05 9.928e-05 0.00% Castro::enforce_consistent_e() 1 7.829e-05 8.591e-05 9.191e-05 0.00% Amr::writeSmallPlotFile() 1 2.601e-05 5.088e-05 7.343e-05 0.00% Castro::finalize_advance() 10 5.275e-05 5.913e-05 6.527e-05 0.00% Castro::enforce_speed_limit() 62 2.91e-05 3.221e-05 3.727e-05 0.00% FabArrayBase::CPC::define() 2 2.363e-05 2.78e-05 3.378e-05 0.00% Gravity::swapTimeLevels() 10 1.368e-05 1.735e-05 2.598e-05 0.00% Castro::create_source_corrector() 10 1.39e-05 1.743e-05 2.016e-05 0.00% Amr::initSubcycle() 1 8.073e-06 9.593e-06 1.413e-05 0.00% Gravity::set_mass_offset() 10 6.319e-06 7.895e-06 9.069e-06 0.00% Castro::FluxRegFineAdd() 10 5.414e-06 6.556e-06 8.248e-06 0.00% Castro::retry_advance_ctu() 10 5.02e-06 5.728e-06 6.589e-06 0.00% DistributionMapping::Distribute() 1 9.06e-07 1.057e-06 1.298e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.02-7-g9558c8a1684c) finalized