MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.02-7-g9558c8a1684c) initialized Starting run at 06:31:09 UTC on 2022-02-10. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.02-7-g9558c8a16 Microphysics git describe: 22.02 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012696505 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.337053264 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.344747885 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.312510928 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.311087702 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.31258776 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.337424341 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.297713793 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.290815836 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.290643881 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.290295217 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009689666 seconds Ending run at 06:31:12 UTC on 2022-02-10. Run time = 3.348650949 Run time without initialization = 3.138190916 Average number of zones advanced per microsecond: 0.835 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.348 ... 3.349 ... 3.349 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1136 2.1752 2.2132 66.09% Gravity::make_radial_gravity() 21 0.3394 0.3457 0.3572 10.67% MultiFab::min() 10 0.03269 0.07339 0.1373 4.10% Castro::initData() 1 0.03974 0.08348 0.1343 4.01% Castro::estTimeStep() 21 0.01814 0.07694 0.1272 3.80% FabArray::setVal() 143 0.06886 0.07299 0.07792 2.33% FabArray::ParallelCopy_finish() 41 0.02978 0.03909 0.05705 1.70% Castro::reset_internal_energy() 63 0.04834 0.04995 0.05255 1.57% StateData::FillBoundary(geom) 41 0.03804 0.04148 0.04293 1.28% FabArray::ParallelCopy_nowait() 41 0.03908 0.04182 0.04271 1.28% FillPatchIterator::Initialize 41 0.0235 0.03157 0.0349 1.04% Castro::normalize_species() 62 0.03238 0.03338 0.03425 1.02% Gravity::interpolate_monopole_grav() 21 0.02751 0.02821 0.02939 0.88% Castro::construct_new_gravity_source() 10 0.02277 0.02478 0.02704 0.81% Castro::do_advance_ctu() 10 0.01723 0.02074 0.02327 0.70% Castro::expand_state() 10 0.01209 0.01845 0.021 0.63% Castro::computeTemp() 63 0.01795 0.01864 0.01926 0.58% Castro::initialize_do_advance() 10 0.01167 0.01649 0.01798 0.54% MultiFab::Saxpy() 20 0.01493 0.01608 0.01708 0.51% Amr::InitAmr() 1 0.0002833 0.002094 0.01461 0.44% Castro::initialize_advance() 10 0.01062 0.01245 0.0145 0.43% DistributionMapping::LeastUsedCPUs() 1 1.192e-05 0.0126 0.01442 0.43% VisMF::Write(FabArray) 2 0.01189 0.01227 0.01429 0.43% Gravity::get_new_grav_vector() 11 0.01045 0.01158 0.01302 0.39% Castro::construct_old_gravity_source() 10 0.009302 0.01179 0.01278 0.38% MultiFab::contains_nan() 20 0.01035 0.01134 0.01228 0.37% FabArray::setDomainBndry() 41 0.006798 0.01045 0.01221 0.36% Amr::writePlotFile() 2 0.008293 0.01035 0.01094 0.33% Gravity::get_old_grav_vector() 10 0.007932 0.00929 0.01046 0.31% Amr::defBaseLevel() 1 0.006569 0.007687 0.01036 0.31% Castro::construct_new_source() 50 0.006316 0.00663 0.006881 0.21% Castro::enforce_min_density() 62 0.005915 0.006178 0.006435 0.19% StateData::define() 4 0.004366 0.004955 0.006383 0.19% Castro::swap_state_time_levels() 10 0.002955 0.003826 0.003977 0.12% main() 1 0.00358 0.003701 0.003824 0.11% Amr::coarseTimeStep() 10 0.0003166 0.0006677 0.001214 0.04% Castro::finalize_do_advance() 10 0.0004552 0.0008352 0.001001 0.03% Amr::timeStep() 10 0.0001743 0.000229 0.0004571 0.01% Castro::clean_state() 62 0.0001261 0.0001354 0.000147 0.00% Castro::enforce_consistent_e() 1 7.72e-05 9.436e-05 0.0001428 0.00% StateDataPhysBCFunct::() 41 0.0001103 0.0001278 0.0001397 0.00% Castro::construct_old_source() 50 5.596e-05 7.606e-05 9.968e-05 0.00% Amr::FinalizeInit() 1 4.04e-06 1.748e-05 9.69e-05 0.00% FillPatchSingleLevel 41 5.898e-05 6.47e-05 7.453e-05 0.00% FabArray::ParallelCopy() 41 5.998e-05 6.502e-05 7.4e-05 0.00% Castro::subcycle_advance_ctu() 10 4.574e-05 5.824e-05 7.326e-05 0.00% Castro::do_new_sources() 10 5.255e-05 6.142e-05 7.178e-05 0.00% Castro::do_old_sources() 10 4.589e-05 5.798e-05 6.858e-05 0.00% FabArrayBase::getCPC() 41 4.954e-05 5.885e-05 6.794e-05 0.00% Amr::writeSmallPlotFile() 1 2.563e-05 5.354e-05 6.312e-05 0.00% Castro::apply_source_to_state() 20 3.812e-05 4.711e-05 5.669e-05 0.00% Castro::construct_old_gravity() 10 4.852e-05 5.292e-05 5.659e-05 0.00% Castro::finalize_advance() 10 5.024e-05 5.279e-05 5.572e-05 0.00% Castro::construct_new_gravity() 10 4.028e-05 4.448e-05 5.068e-05 0.00% Castro::advance() 10 3.542e-05 4.085e-05 4.968e-05 0.00% Castro::enforce_speed_limit() 62 2.872e-05 3.159e-05 3.696e-05 0.00% FabArrayBase::CPC::define() 2 2.228e-05 2.696e-05 3.38e-05 0.00% Castro::check_for_nan() 20 2.192e-05 2.427e-05 3.328e-05 0.00% Amr::initSubcycle() 1 8.33e-06 1.051e-05 2.206e-05 0.00% Castro::create_source_corrector() 10 1.327e-05 1.673e-05 2.182e-05 0.00% Gravity::swapTimeLevels() 10 1.036e-05 1.327e-05 1.651e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.224e-06 9.7e-06 1.287e-05 0.00% Castro::post_timestep() 10 8.665e-06 9.334e-06 1.032e-05 0.00% Gravity::set_mass_offset() 10 6.586e-06 7.944e-06 9.102e-06 0.00% Amr::InitializeInit() 1 1.844e-06 3.057e-06 8.837e-06 0.00% Castro::computeNewDt() 9 6.987e-06 7.516e-06 8.185e-06 0.00% Castro::post_init() 1 3.536e-06 4.51e-06 7.97e-06 0.00% Castro::retry_advance_ctu() 10 5.284e-06 6.31e-06 7.689e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.698e-06 5.082e-06 7.371e-06 0.00% Castro::FluxRegFineAdd() 10 5.589e-06 6.219e-06 7.258e-06 0.00% Castro::post_regrid() 1 2.047e-06 3.974e-06 5.713e-06 0.00% Castro::computeInitialDt() 2 3.172e-06 4.215e-06 5.479e-06 0.00% Amr::init() 1 2.574e-06 2.885e-06 3.376e-06 0.00% Amr::initialInit() 1 1.302e-06 1.495e-06 1.829e-06 0.00% DistributionMapping::Distribute() 1 1.019e-06 1.13e-06 1.452e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.348 3.349 3.349 100.00% Amr::coarseTimeStep() 10 3.125 3.125 3.125 93.31% Amr::timeStep() 10 3.115 3.116 3.116 93.05% Castro::advance() 10 3.101 3.101 3.101 92.62% Castro::subcycle_advance_ctu() 10 3.023 3.026 3.028 90.42% Castro::do_advance_ctu() 10 3.023 3.026 3.028 90.42% Castro::construct_ctu_hydro_source() 10 2.114 2.175 2.213 66.09% Gravity::make_radial_gravity() 21 0.3394 0.3457 0.3572 10.67% Gravity::get_new_grav_vector() 11 0.2262 0.2273 0.2283 6.82% Castro::construct_old_gravity() 10 0.2 0.2052 0.2152 6.43% Gravity::get_old_grav_vector() 10 0.1992 0.2044 0.2144 6.40% Amr::init() 1 0.1956 0.2082 0.21 6.27% Castro::construct_new_gravity() 10 0.2031 0.204 0.2053 6.13% Amr::initialInit() 1 0.1828 0.1953 0.1972 5.89% Amr::InitializeInit() 1 0.07208 0.1148 0.1704 5.09% Amr::defBaseLevel() 1 0.07207 0.1148 0.1704 5.09% FillPatchIterator::Initialize 41 0.1613 0.1648 0.1699 5.07% Castro::initialize_do_advance() 10 0.1406 0.1526 0.1595 4.76% Castro::initData() 1 0.04302 0.0874 0.1377 4.11% MultiFab::min() 10 0.03269 0.07339 0.1373 4.10% FillPatchSingleLevel 41 0.1151 0.1227 0.1345 4.02% Castro::estTimeStep() 21 0.01814 0.07694 0.1272 3.80% Amr::FinalizeInit() 1 0.02663 0.0805 0.1251 3.74% Castro::expand_state() 10 0.1014 0.1075 0.1132 3.38% Castro::clean_state() 62 0.1059 0.1073 0.111 3.32% Castro::computeInitialDt() 2 0.001624 0.05558 0.1001 2.99% FabArray::ParallelCopy() 41 0.07242 0.08106 0.09628 2.88% FabArray::setVal() 143 0.06886 0.07299 0.07792 2.33% Castro::initialize_advance() 10 0.07322 0.07514 0.07752 2.31% Castro::computeTemp() 63 0.06662 0.06859 0.07181 2.14% Castro::do_new_sources() 10 0.05994 0.06387 0.06807 2.03% FabArray::ParallelCopy_finish() 41 0.02978 0.03909 0.05705 1.70% Castro::reset_internal_energy() 63 0.04834 0.04995 0.05255 1.57% Castro::do_old_sources() 10 0.04614 0.04765 0.04831 1.44% StateDataPhysBCFunct::() 41 0.03816 0.04161 0.04307 1.29% StateData::FillBoundary(geom) 41 0.03804 0.04148 0.04293 1.28% FabArray::ParallelCopy_nowait() 41 0.03917 0.04191 0.04279 1.28% Castro::normalize_species() 62 0.03238 0.03338 0.03425 1.02% Castro::construct_new_source() 50 0.02928 0.03141 0.03392 1.01% Gravity::interpolate_monopole_grav() 21 0.02751 0.02821 0.02939 0.88% Castro::construct_new_gravity_source() 10 0.02277 0.02478 0.02704 0.81% Castro::post_init() 1 0.0242 0.02439 0.02454 0.73% Amr::writePlotFile() 2 0.02253 0.02263 0.02283 0.68% Castro::apply_source_to_state() 20 0.01498 0.01613 0.01713 0.51% MultiFab::Saxpy() 20 0.01493 0.01608 0.01708 0.51% Castro::post_timestep() 10 0.01397 0.01424 0.01464 0.44% Amr::InitAmr() 1 0.0002917 0.002104 0.01463 0.44% DistributionMapping::SFCProcessorMapDoIt() 1 1.804e-05 0.0126 0.01443 0.43% DistributionMapping::LeastUsedCPUs() 1 1.192e-05 0.0126 0.01442 0.43% VisMF::Write(FabArray) 2 0.01189 0.01227 0.01429 0.43% Castro::construct_old_source() 50 0.009358 0.01186 0.01288 0.38% Castro::construct_old_gravity_source() 10 0.009302 0.01179 0.01278 0.38% Castro::check_for_nan() 20 0.01038 0.01136 0.0123 0.37% MultiFab::contains_nan() 20 0.01035 0.01134 0.01228 0.37% FabArray::setDomainBndry() 41 0.006798 0.01045 0.01221 0.36% Castro::computeNewDt() 9 0.0068 0.007527 0.008054 0.24% Castro::enforce_min_density() 62 0.005915 0.006178 0.006435 0.19% AmrLevel::AmrLevel(dm) 1 0.004375 0.004964 0.006394 0.19% StateData::define() 4 0.004366 0.004955 0.006383 0.19% Castro::swap_state_time_levels() 10 0.002955 0.003826 0.003977 0.12% Castro::post_regrid() 1 0.001394 0.001441 0.001517 0.05% Castro::finalize_do_advance() 10 0.0004552 0.0008352 0.001001 0.03% Castro::enforce_consistent_e() 1 7.72e-05 9.436e-05 0.0001428 0.00% FabArrayBase::getCPC() 41 7.518e-05 8.582e-05 9.446e-05 0.00% Amr::writeSmallPlotFile() 1 2.563e-05 5.354e-05 6.312e-05 0.00% Castro::finalize_advance() 10 5.657e-05 5.901e-05 6.192e-05 0.00% Castro::enforce_speed_limit() 62 2.872e-05 3.159e-05 3.696e-05 0.00% FabArrayBase::CPC::define() 2 2.228e-05 2.696e-05 3.38e-05 0.00% Amr::initSubcycle() 1 8.33e-06 1.051e-05 2.206e-05 0.00% Castro::create_source_corrector() 10 1.327e-05 1.673e-05 2.182e-05 0.00% Gravity::swapTimeLevels() 10 1.036e-05 1.327e-05 1.651e-05 0.00% Gravity::set_mass_offset() 10 6.586e-06 7.944e-06 9.102e-06 0.00% Castro::retry_advance_ctu() 10 5.284e-06 6.31e-06 7.689e-06 0.00% Castro::FluxRegFineAdd() 10 5.589e-06 6.219e-06 7.258e-06 0.00% DistributionMapping::Distribute() 1 1.019e-06 1.13e-06 1.452e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.02-7-g9558c8a1684c) finalized