MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.02-8-g0f55de0e2ef6) initialized Starting run at 06:31:21 UTC on 2022-02-11. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.02-8-g0f55de0e2 Microphysics git describe: 22.02 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012214804 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.332890711 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.355800906 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.312714717 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.337313654 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.309473347 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.331243096 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.294849932 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.288935522 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.287544798 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.28860137 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.016596045 seconds Ending run at 06:31:25 UTC on 2022-02-11. Run time = 3.353948454 Run time without initialization = 3.159439143 Average number of zones advanced per microsecond: 0.830 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.353 ... 3.354 ... 3.354 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1144 2.1829 2.2396 66.77% Gravity::make_radial_gravity() 21 0.3293 0.3388 0.3572 10.65% MultiFab::min() 10 0.0543 0.1116 0.1832 5.46% Castro::initData() 1 0.04612 0.08568 0.133 3.97% Castro::estTimeStep() 21 0.02381 0.07249 0.1181 3.52% FabArray::ParallelCopy_finish() 41 0.03318 0.04318 0.08498 2.53% FabArray::setVal() 143 0.05153 0.06596 0.07237 2.16% Castro::reset_internal_energy() 63 0.04897 0.04989 0.05103 1.52% StateData::FillBoundary(geom) 41 0.03767 0.04108 0.04449 1.33% FabArray::ParallelCopy_nowait() 41 0.03286 0.03926 0.0409 1.22% Castro::normalize_species() 62 0.03251 0.03305 0.03363 1.00% FillPatchIterator::Initialize 41 0.02253 0.02833 0.03158 0.94% Gravity::interpolate_monopole_grav() 21 0.02762 0.02802 0.0288 0.86% Castro::construct_new_gravity_source() 10 0.02011 0.02325 0.02615 0.78% Castro::do_advance_ctu() 10 0.01436 0.01942 0.0227 0.68% Castro::expand_state() 10 0.01203 0.01781 0.02059 0.61% Castro::computeTemp() 63 0.01784 0.01874 0.01942 0.58% Amr::writePlotFile() 2 0.01487 0.01715 0.01844 0.55% Castro::initialize_do_advance() 10 0.00993 0.01494 0.01605 0.48% MultiFab::Saxpy() 20 0.01282 0.01443 0.0154 0.46% VisMF::Write(FabArray) 2 0.01087 0.01194 0.01414 0.42% Castro::initialize_advance() 10 0.003851 0.01004 0.0129 0.38% Gravity::get_new_grav_vector() 11 0.009148 0.01072 0.01244 0.37% MultiFab::contains_nan() 20 0.009782 0.01075 0.01167 0.35% Castro::construct_old_gravity_source() 10 0.006788 0.01049 0.01133 0.34% FabArray::setDomainBndry() 41 0.00653 0.009383 0.01097 0.33% Amr::defBaseLevel() 1 0.006393 0.007576 0.0101 0.30% Gravity::get_old_grav_vector() 10 0.006661 0.00858 0.009825 0.29% Castro::construct_new_source() 50 0.005673 0.006355 0.006737 0.20% Castro::enforce_min_density() 62 0.00568 0.006095 0.006547 0.20% StateData::define() 4 0.004245 0.004937 0.006403 0.19% main() 1 0.003154 0.003628 0.003873 0.12% Castro::swap_state_time_levels() 10 0.002431 0.003494 0.003801 0.11% Castro::finalize_do_advance() 10 0.0004629 0.0009023 0.001058 0.03% Amr::coarseTimeStep() 10 0.0004613 0.0006755 0.001024 0.03% Amr::InitAmr() 1 0.0002699 0.0003335 0.0005814 0.02% Amr::timeStep() 10 0.000163 0.0002258 0.0004875 0.01% DistributionMapping::LeastUsedCPUs() 1 8.154e-06 0.0002965 0.0003769 0.01% Castro::clean_state() 62 0.0001241 0.0001444 0.0001679 0.01% StateDataPhysBCFunct::() 41 0.0001175 0.0001308 0.000143 0.00% Castro::enforce_consistent_e() 1 8.564e-05 9.3e-05 0.0001012 0.00% Castro::construct_old_source() 50 6.082e-05 7.832e-05 9.706e-05 0.00% FabArrayBase::getCPC() 41 5.007e-05 6.147e-05 8.785e-05 0.00% FillPatchSingleLevel 41 6.348e-05 6.954e-05 7.997e-05 0.00% Amr::FinalizeInit() 1 3.467e-06 1.348e-05 7.653e-05 0.00% Amr::writeSmallPlotFile() 1 3.05e-05 5.16e-05 7.436e-05 0.00% FabArray::ParallelCopy() 41 6.004e-05 6.774e-05 7.226e-05 0.00% Castro::finalize_advance() 10 5.138e-05 5.873e-05 7.149e-05 0.00% Castro::do_old_sources() 10 4.916e-05 6.13e-05 7.042e-05 0.00% Castro::do_new_sources() 10 5.583e-05 6.057e-05 6.885e-05 0.00% Castro::subcycle_advance_ctu() 10 4.277e-05 5.329e-05 6.228e-05 0.00% Castro::construct_old_gravity() 10 4.941e-05 5.466e-05 5.928e-05 0.00% Castro::construct_new_gravity() 10 4.036e-05 4.783e-05 5.825e-05 0.00% Castro::advance() 10 3.617e-05 4.345e-05 5.7e-05 0.00% Castro::apply_source_to_state() 20 4.465e-05 5.029e-05 5.397e-05 0.00% Castro::enforce_speed_limit() 62 2.635e-05 3.22e-05 4.386e-05 0.00% FabArrayBase::CPC::define() 2 2.234e-05 2.697e-05 4.143e-05 0.00% Castro::check_for_nan() 20 2.281e-05 2.46e-05 2.59e-05 0.00% Castro::create_source_corrector() 10 1.418e-05 1.586e-05 1.773e-05 0.00% Gravity::swapTimeLevels() 10 1.128e-05 1.283e-05 1.49e-05 0.00% Amr::initSubcycle() 1 8.077e-06 1.029e-05 1.489e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.12e-06 9.741e-06 1.362e-05 0.00% Castro::post_timestep() 10 8.559e-06 9.639e-06 1.147e-05 0.00% Amr::InitializeInit() 1 1.824e-06 3.111e-06 9.382e-06 0.00% Gravity::set_mass_offset() 10 6.506e-06 7.8e-06 9.297e-06 0.00% Castro::computeNewDt() 9 6.284e-06 7.638e-06 8.476e-06 0.00% Castro::post_regrid() 1 2.113e-06 3.2e-06 7.796e-06 0.00% Castro::FluxRegFineAdd() 10 6.004e-06 6.782e-06 7.559e-06 0.00% Castro::retry_advance_ctu() 10 4.995e-06 5.9e-06 6.7e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.712e-06 4.553e-06 5.373e-06 0.00% Castro::computeInitialDt() 2 2.836e-06 3.602e-06 4.912e-06 0.00% Castro::post_init() 1 2.589e-06 3.824e-06 4.854e-06 0.00% Amr::init() 1 1.824e-06 2.268e-06 3.178e-06 0.00% Amr::initialInit() 1 1.301e-06 1.623e-06 1.969e-06 0.00% DistributionMapping::Distribute() 1 8.84e-07 1.18e-06 1.864e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.353 3.354 3.354 100.00% Amr::coarseTimeStep() 10 3.139 3.139 3.139 93.59% Amr::timeStep() 10 3.13 3.13 3.13 93.33% Castro::advance() 10 3.115 3.116 3.116 92.90% Castro::subcycle_advance_ctu() 10 3.044 3.049 3.067 91.43% Castro::do_advance_ctu() 10 3.044 3.049 3.067 91.43% Castro::construct_ctu_hydro_source() 10 2.114 2.183 2.24 66.77% Gravity::make_radial_gravity() 21 0.3293 0.3388 0.3572 10.65% Gravity::get_new_grav_vector() 11 0.2178 0.2195 0.2206 6.58% Castro::construct_old_gravity() 10 0.1962 0.2032 0.2189 6.53% Gravity::get_old_grav_vector() 10 0.1954 0.2025 0.2183 6.51% Castro::construct_new_gravity() 10 0.1954 0.1962 0.1976 5.89% Amr::init() 1 0.1937 0.194 0.1941 5.79% FillPatchIterator::Initialize 41 0.1536 0.1616 0.1877 5.60% MultiFab::min() 10 0.0543 0.1116 0.1832 5.46% Amr::initialInit() 1 0.1813 0.1816 0.1818 5.42% FillPatchSingleLevel 41 0.1141 0.1239 0.1586 4.73% Castro::initialize_do_advance() 10 0.1465 0.1501 0.1568 4.67% Amr::InitializeInit() 1 0.06463 0.1044 0.155 4.62% Amr::defBaseLevel() 1 0.06463 0.1044 0.155 4.62% Castro::initData() 1 0.05008 0.08953 0.1366 4.07% Castro::expand_state() 10 0.1022 0.1069 0.1199 3.58% Castro::estTimeStep() 21 0.02381 0.07249 0.1181 3.52% FabArray::ParallelCopy() 41 0.07315 0.0826 0.118 3.52% Amr::FinalizeInit() 1 0.02629 0.07723 0.1168 3.48% Castro::clean_state() 62 0.1054 0.107 0.1085 3.23% Castro::computeInitialDt() 2 0.001701 0.05248 0.09226 2.75% FabArray::ParallelCopy_finish() 41 0.03318 0.04318 0.08498 2.53% FabArray::setVal() 143 0.05153 0.06596 0.07237 2.16% Castro::initialize_advance() 10 0.04843 0.06679 0.07167 2.14% Castro::computeTemp() 63 0.06698 0.06863 0.07017 2.09% Castro::do_new_sources() 10 0.05554 0.06096 0.0654 1.95% Castro::reset_internal_energy() 63 0.04897 0.04989 0.05103 1.52% Castro::do_old_sources() 10 0.0385 0.04487 0.04608 1.37% StateDataPhysBCFunct::() 41 0.0378 0.04121 0.04461 1.33% StateData::FillBoundary(geom) 41 0.03767 0.04108 0.04449 1.33% FabArray::ParallelCopy_nowait() 41 0.03299 0.03935 0.04098 1.22% Castro::normalize_species() 62 0.03251 0.03305 0.03363 1.00% Castro::construct_new_source() 50 0.02578 0.0296 0.03289 0.98% Amr::writePlotFile() 2 0.02895 0.02909 0.02932 0.87% Gravity::interpolate_monopole_grav() 21 0.02762 0.02802 0.0288 0.86% Castro::construct_new_gravity_source() 10 0.02011 0.02325 0.02615 0.78% Castro::post_init() 1 0.02392 0.02416 0.02432 0.73% Castro::apply_source_to_state() 20 0.01288 0.01448 0.01546 0.46% MultiFab::Saxpy() 20 0.01282 0.01443 0.0154 0.46% Castro::post_timestep() 10 0.01408 0.01427 0.01446 0.43% VisMF::Write(FabArray) 2 0.01087 0.01194 0.01414 0.42% Castro::check_for_nan() 20 0.009806 0.01078 0.0117 0.35% MultiFab::contains_nan() 20 0.009782 0.01075 0.01167 0.35% Castro::construct_old_source() 50 0.006849 0.01057 0.01143 0.34% Castro::construct_old_gravity_source() 10 0.006788 0.01049 0.01133 0.34% FabArray::setDomainBndry() 41 0.00653 0.009383 0.01097 0.33% Castro::computeNewDt() 9 0.006818 0.007322 0.007755 0.23% Castro::enforce_min_density() 62 0.00568 0.006095 0.006547 0.20% AmrLevel::AmrLevel(dm) 1 0.004254 0.004947 0.006417 0.19% StateData::define() 4 0.004245 0.004937 0.006403 0.19% Castro::swap_state_time_levels() 10 0.002431 0.003494 0.003801 0.11% Castro::post_regrid() 1 0.001433 0.001507 0.001776 0.05% Castro::finalize_do_advance() 10 0.0004629 0.0009023 0.001058 0.03% Amr::InitAmr() 1 0.0002787 0.0003438 0.0005961 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.435e-05 0.0003022 0.0003831 0.01% DistributionMapping::LeastUsedCPUs() 1 8.154e-06 0.0002965 0.0003769 0.01% FabArrayBase::getCPC() 41 7.542e-05 8.844e-05 0.0001293 0.00% Castro::enforce_consistent_e() 1 8.564e-05 9.3e-05 0.0001012 0.00% Castro::finalize_advance() 10 5.769e-05 6.551e-05 7.75e-05 0.00% Amr::writeSmallPlotFile() 1 3.05e-05 5.16e-05 7.436e-05 0.00% Castro::enforce_speed_limit() 62 2.635e-05 3.22e-05 4.386e-05 0.00% FabArrayBase::CPC::define() 2 2.234e-05 2.697e-05 4.143e-05 0.00% Castro::create_source_corrector() 10 1.418e-05 1.586e-05 1.773e-05 0.00% Gravity::swapTimeLevels() 10 1.128e-05 1.283e-05 1.49e-05 0.00% Amr::initSubcycle() 1 8.077e-06 1.029e-05 1.489e-05 0.00% Gravity::set_mass_offset() 10 6.506e-06 7.8e-06 9.297e-06 0.00% Castro::FluxRegFineAdd() 10 6.004e-06 6.782e-06 7.559e-06 0.00% Castro::retry_advance_ctu() 10 4.995e-06 5.9e-06 6.7e-06 0.00% DistributionMapping::Distribute() 1 8.84e-07 1.18e-06 1.864e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.02-8-g0f55de0e2ef6) finalized