MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.02-8-g0f55de0e2ef6) initialized Starting run at 06:32:03 UTC on 2022-02-14. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.02-8-g0f55de0e2 Microphysics git describe: 22.02-1-g11641bf5 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014571853 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.354043215 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.320999936 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.31599995 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.31717308 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.315949497 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.329093521 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.306758192 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.303838956 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.302908682 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.302737986 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.00956208 seconds Ending run at 06:32:06 UTC on 2022-02-14. Run time = 3.382763188 Run time without initialization = 3.183051782 Average number of zones advanced per microsecond: 0.824 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.381 ... 3.382 ... 3.383 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0735 2.2001 2.2774 67.32% Gravity::make_radial_gravity() 21 0.3419 0.3531 0.377 11.15% MultiFab::min() 10 0.01198 0.09223 0.2254 6.66% Castro::initData() 1 0.03868 0.09091 0.1362 4.03% Castro::estTimeStep() 21 0.02121 0.06779 0.1203 3.56% FabArray::ParallelCopy_finish() 41 0.02954 0.04691 0.08786 2.60% FabArray::setVal() 143 0.0588 0.06907 0.07334 2.17% Castro::reset_internal_energy() 63 0.04877 0.05005 0.05291 1.56% StateData::FillBoundary(geom) 41 0.03812 0.04218 0.04496 1.33% FabArray::ParallelCopy_nowait() 41 0.0304 0.04067 0.04409 1.30% FillPatchIterator::Initialize 41 0.02131 0.0306 0.035 1.03% Castro::normalize_species() 62 0.03285 0.03326 0.03362 0.99% Gravity::interpolate_monopole_grav() 21 0.02795 0.02853 0.02907 0.86% Castro::construct_new_gravity_source() 10 0.01861 0.02305 0.02444 0.72% Castro::do_advance_ctu() 10 0.01295 0.02027 0.02378 0.70% Castro::expand_state() 10 0.01083 0.01867 0.02143 0.63% Castro::computeTemp() 63 0.01805 0.01881 0.02022 0.60% Castro::initialize_do_advance() 10 0.009633 0.01647 0.0189 0.56% MultiFab::Saxpy() 20 0.01147 0.01433 0.01589 0.47% VisMF::Write(FabArray) 2 0.01167 0.0122 0.0145 0.43% Castro::initialize_advance() 10 0.01093 0.01156 0.01278 0.38% Amr::writePlotFile() 2 0.009854 0.01177 0.01272 0.38% Gravity::get_new_grav_vector() 11 0.008821 0.0111 0.01235 0.36% Castro::construct_old_gravity_source() 10 0.005953 0.01066 0.01226 0.36% FabArray::setDomainBndry() 41 0.006009 0.01019 0.0121 0.36% MultiFab::contains_nan() 20 0.009569 0.01069 0.01145 0.34% Gravity::get_old_grav_vector() 10 0.006234 0.00909 0.01025 0.30% Amr::defBaseLevel() 1 0.006507 0.008432 0.009801 0.29% Castro::construct_new_source() 50 0.005349 0.006471 0.006801 0.20% StateData::define() 4 0.004295 0.005553 0.006418 0.19% Castro::enforce_min_density() 62 0.005623 0.006035 0.006293 0.19% main() 1 0.003263 0.004153 0.004729 0.14% Castro::swap_state_time_levels() 10 0.002772 0.003573 0.004133 0.12% Castro::finalize_do_advance() 10 0.0004624 0.0009685 0.00114 0.03% Amr::coarseTimeStep() 10 0.0004223 0.0005788 0.0008366 0.02% Amr::InitAmr() 1 0.0002873 0.0003985 0.0006004 0.02% Amr::timeStep() 10 0.0001588 0.0002397 0.0005518 0.02% DistributionMapping::LeastUsedCPUs() 1 1.143e-05 0.0002437 0.0003789 0.01% Castro::clean_state() 62 0.0001217 0.0001363 0.0001624 0.00% StateDataPhysBCFunct::() 41 0.0001179 0.0001242 0.0001331 0.00% Castro::enforce_consistent_e() 1 8.4e-05 9.13e-05 0.0001118 0.00% Castro::construct_old_source() 50 4.224e-05 7.2e-05 9.249e-05 0.00% Castro::subcycle_advance_ctu() 10 3.621e-05 5.223e-05 7.931e-05 0.00% FabArrayBase::getCPC() 41 4.263e-05 5.759e-05 7.364e-05 0.00% Castro::do_new_sources() 10 4.536e-05 6.174e-05 7.271e-05 0.00% Castro::do_old_sources() 10 4.155e-05 5.913e-05 7.178e-05 0.00% Amr::FinalizeInit() 1 3.628e-06 1.314e-05 7.162e-05 0.00% FabArray::ParallelCopy() 41 5.186e-05 6.416e-05 7.16e-05 0.00% FillPatchSingleLevel 41 5.344e-05 6.301e-05 6.793e-05 0.00% Amr::writeSmallPlotFile() 1 3.703e-05 5.891e-05 6.638e-05 0.00% Castro::construct_old_gravity() 10 4.339e-05 5.577e-05 6.241e-05 0.00% Castro::apply_source_to_state() 20 3.398e-05 4.855e-05 5.68e-05 0.00% Castro::construct_new_gravity() 10 3.697e-05 4.634e-05 5.559e-05 0.00% Castro::finalize_advance() 10 4.795e-05 5.179e-05 5.507e-05 0.00% Castro::advance() 10 3.231e-05 3.827e-05 4.429e-05 0.00% Castro::enforce_speed_limit() 62 2.479e-05 3.027e-05 3.287e-05 0.00% FabArrayBase::CPC::define() 2 2.184e-05 2.492e-05 3.014e-05 0.00% Castro::check_for_nan() 20 1.868e-05 2.44e-05 2.764e-05 0.00% Gravity::swapTimeLevels() 10 8.62e-06 1.234e-05 2.219e-05 0.00% Castro::create_source_corrector() 10 1.418e-05 1.691e-05 2.204e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.821e-06 1.198e-05 1.881e-05 0.00% Amr::initSubcycle() 1 9.098e-06 1.267e-05 1.658e-05 0.00% Castro::post_timestep() 10 8.318e-06 9.779e-06 1.077e-05 0.00% Gravity::set_mass_offset() 10 7.013e-06 8.529e-06 1.012e-05 0.00% Castro::computeNewDt() 9 6.551e-06 7.631e-06 9.496e-06 0.00% Castro::post_init() 1 2.946e-06 4.382e-06 9.427e-06 0.00% Amr::InitializeInit() 1 2.257e-06 3.361e-06 8.554e-06 0.00% Castro::retry_advance_ctu() 10 4.938e-06 6.208e-06 7.453e-06 0.00% Castro::FluxRegFineAdd() 10 5.564e-06 6.184e-06 7.105e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.363e-06 5.165e-06 6.558e-06 0.00% Castro::post_regrid() 1 1.977e-06 3.898e-06 5.531e-06 0.00% Castro::computeInitialDt() 2 3.341e-06 4.106e-06 5.254e-06 0.00% Amr::init() 1 2.077e-06 2.38e-06 2.729e-06 0.00% Amr::initialInit() 1 1.243e-06 1.621e-06 1.925e-06 0.00% DistributionMapping::Distribute() 1 1.016e-06 1.327e-06 1.522e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.381 3.382 3.383 100.00% Amr::coarseTimeStep() 10 3.169 3.169 3.169 93.67% Amr::timeStep() 10 3.159 3.16 3.16 93.42% Castro::advance() 10 3.145 3.145 3.145 92.98% Castro::subcycle_advance_ctu() 10 3.07 3.073 3.079 91.02% Castro::do_advance_ctu() 10 3.069 3.073 3.079 91.02% Castro::construct_ctu_hydro_source() 10 2.074 2.2 2.277 67.32% Gravity::make_radial_gravity() 21 0.3419 0.3531 0.377 11.15% Castro::construct_old_gravity() 10 0.2042 0.2142 0.2325 6.87% Gravity::get_old_grav_vector() 10 0.2033 0.2134 0.2319 6.85% Gravity::get_new_grav_vector() 11 0.2252 0.227 0.229 6.77% MultiFab::min() 10 0.01198 0.09223 0.2254 6.66% Castro::construct_new_gravity() 10 0.1988 0.2002 0.2018 5.96% Amr::init() 1 0.1989 0.1991 0.1993 5.89% FillPatchIterator::Initialize 41 0.1642 0.1709 0.1867 5.52% Amr::initialInit() 1 0.1842 0.1848 0.1856 5.49% Castro::initialize_do_advance() 10 0.1465 0.1555 0.1617 4.78% FillPatchSingleLevel 41 0.1184 0.1301 0.1594 4.71% Amr::InitializeInit() 1 0.05636 0.1107 0.1549 4.58% Amr::defBaseLevel() 1 0.05636 0.1107 0.1549 4.58% Castro::initData() 1 0.04211 0.09459 0.1402 4.15% Amr::FinalizeInit() 1 0.02988 0.07405 0.1287 3.80% Castro::estTimeStep() 21 0.02121 0.06779 0.1203 3.56% FabArray::ParallelCopy() 41 0.07324 0.08772 0.1184 3.50% Castro::expand_state() 10 0.1039 0.1105 0.1151 3.40% Castro::clean_state() 62 0.1046 0.1073 0.1118 3.31% Castro::computeInitialDt() 2 0.001747 0.04596 0.1005 2.97% FabArray::ParallelCopy_finish() 41 0.02954 0.04691 0.08786 2.60% Castro::initialize_advance() 10 0.06543 0.07158 0.07525 2.22% FabArray::setVal() 143 0.0588 0.06907 0.07334 2.17% Castro::computeTemp() 63 0.06701 0.06886 0.07314 2.16% Castro::do_new_sources() 10 0.05243 0.06081 0.06232 1.84% Castro::reset_internal_energy() 63 0.04877 0.05005 0.05291 1.56% Castro::do_old_sources() 10 0.03632 0.04502 0.04805 1.42% StateDataPhysBCFunct::() 41 0.03824 0.0423 0.04508 1.33% StateData::FillBoundary(geom) 41 0.03812 0.04218 0.04496 1.33% FabArray::ParallelCopy_nowait() 41 0.0305 0.04075 0.04418 1.31% Castro::normalize_species() 62 0.03285 0.03326 0.03362 0.99% Castro::construct_new_source() 50 0.02396 0.02952 0.03066 0.91% Gravity::interpolate_monopole_grav() 21 0.02795 0.02853 0.02907 0.86% Castro::post_init() 1 0.02708 0.02761 0.02851 0.84% Amr::writePlotFile() 2 0.02315 0.02397 0.02446 0.72% Castro::construct_new_gravity_source() 10 0.01861 0.02305 0.02444 0.72% Castro::apply_source_to_state() 20 0.01151 0.01438 0.01595 0.47% MultiFab::Saxpy() 20 0.01147 0.01433 0.01589 0.47% Castro::post_timestep() 10 0.0139 0.0144 0.01481 0.44% VisMF::Write(FabArray) 2 0.01167 0.0122 0.0145 0.43% Castro::construct_old_source() 50 0.005995 0.01073 0.01234 0.36% Castro::construct_old_gravity_source() 10 0.005953 0.01066 0.01226 0.36% FabArray::setDomainBndry() 41 0.006009 0.01019 0.0121 0.36% Castro::check_for_nan() 20 0.009587 0.01071 0.01147 0.34% MultiFab::contains_nan() 20 0.009569 0.01069 0.01145 0.34% Castro::computeNewDt() 9 0.006896 0.007569 0.008744 0.26% AmrLevel::AmrLevel(dm) 1 0.004309 0.005565 0.00643 0.19% StateData::define() 4 0.004295 0.005553 0.006418 0.19% Castro::enforce_min_density() 62 0.005623 0.006035 0.006293 0.19% Castro::swap_state_time_levels() 10 0.002772 0.003573 0.004133 0.12% Castro::post_regrid() 1 0.001382 0.001483 0.001761 0.05% Castro::finalize_do_advance() 10 0.0004624 0.0009685 0.00114 0.03% Amr::InitAmr() 1 0.0002964 0.0004111 0.0006162 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.731e-05 0.0002502 0.0003869 0.01% DistributionMapping::LeastUsedCPUs() 1 1.143e-05 0.0002437 0.0003789 0.01% Castro::enforce_consistent_e() 1 8.4e-05 9.13e-05 0.0001118 0.00% FabArrayBase::getCPC() 41 7.277e-05 8.251e-05 9.971e-05 0.00% Amr::writeSmallPlotFile() 1 3.703e-05 5.891e-05 6.638e-05 0.00% Castro::finalize_advance() 10 5.381e-05 5.797e-05 6.116e-05 0.00% Castro::enforce_speed_limit() 62 2.479e-05 3.027e-05 3.287e-05 0.00% FabArrayBase::CPC::define() 2 2.184e-05 2.492e-05 3.014e-05 0.00% Gravity::swapTimeLevels() 10 8.62e-06 1.234e-05 2.219e-05 0.00% Castro::create_source_corrector() 10 1.418e-05 1.691e-05 2.204e-05 0.00% Amr::initSubcycle() 1 9.098e-06 1.267e-05 1.658e-05 0.00% Gravity::set_mass_offset() 10 7.013e-06 8.529e-06 1.012e-05 0.00% Castro::retry_advance_ctu() 10 4.938e-06 6.208e-06 7.453e-06 0.00% Castro::FluxRegFineAdd() 10 5.564e-06 6.184e-06 7.105e-06 0.00% DistributionMapping::Distribute() 1 1.016e-06 1.327e-06 1.522e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.02-8-g0f55de0e2ef6) finalized