MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.02-10-g76d08651adb9) initialized Starting run at 06:31:39 UTC on 2022-02-15. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.02-10-g76d08651a Microphysics git describe: 22.02-1-g11641bf5 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013231594 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.337247733 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.326072653 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.312282225 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.310505108 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.312947213 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.336037488 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.303070046 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.294694025 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.294551513 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.296830758 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009927518 seconds Ending run at 06:31:43 UTC on 2022-02-15. Run time = 3.32562684 Run time without initialization = 3.13771796 Average number of zones advanced per microsecond: 0.835 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.325 ... 3.326 ... 3.326 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1132 2.1884 2.2258 66.93% Gravity::make_radial_gravity() 21 0.3386 0.3496 0.3692 11.10% MultiFab::min() 10 0.02931 0.07102 0.1491 4.48% Castro::initData() 1 0.0395 0.08116 0.1259 3.79% Castro::estTimeStep() 21 0.0173 0.0689 0.1139 3.43% FabArray::ParallelCopy_finish() 41 0.03296 0.04394 0.08555 2.57% FabArray::setVal() 143 0.05433 0.06821 0.07432 2.23% Castro::reset_internal_energy() 63 0.04856 0.05083 0.05201 1.56% StateData::FillBoundary(geom) 41 0.04015 0.04172 0.04573 1.38% FabArray::ParallelCopy_nowait() 41 0.03393 0.03997 0.04197 1.26% Castro::normalize_species() 62 0.03333 0.03384 0.0344 1.03% FillPatchIterator::Initialize 41 0.02261 0.02835 0.03155 0.95% Gravity::interpolate_monopole_grav() 21 0.02819 0.02858 0.02905 0.87% Castro::construct_new_gravity_source() 10 0.01981 0.02366 0.0262 0.79% Castro::do_advance_ctu() 10 0.01434 0.01995 0.02287 0.69% Castro::expand_state() 10 0.01179 0.01806 0.02045 0.61% Castro::computeTemp() 63 0.01802 0.01911 0.01967 0.59% Castro::initialize_do_advance() 10 0.01011 0.01543 0.01694 0.51% MultiFab::Saxpy() 20 0.01272 0.01465 0.0158 0.48% VisMF::Write(FabArray) 2 0.01233 0.0128 0.0151 0.45% Gravity::get_new_grav_vector() 11 0.009565 0.01079 0.01315 0.40% Castro::initialize_advance() 10 0.003865 0.01023 0.01279 0.38% MultiFab::contains_nan() 20 0.01006 0.01133 0.01231 0.37% Castro::construct_old_gravity_source() 10 0.007257 0.01097 0.01179 0.35% Amr::writePlotFile() 2 0.008276 0.01082 0.01153 0.35% FabArray::setDomainBndry() 41 0.006771 0.009438 0.01114 0.33% Gravity::get_old_grav_vector() 10 0.00666 0.008615 0.01002 0.30% Amr::defBaseLevel() 1 0.00663 0.006977 0.007521 0.23% Castro::construct_new_source() 50 0.005833 0.006447 0.006792 0.20% Castro::enforce_min_density() 62 0.005805 0.006226 0.006571 0.20% StateData::define() 4 0.004309 0.004474 0.00474 0.14% main() 1 0.003403 0.003905 0.004096 0.12% Castro::swap_state_time_levels() 10 0.002916 0.003495 0.003711 0.11% Castro::finalize_do_advance() 10 0.0004571 0.0008916 0.001033 0.03% Amr::coarseTimeStep() 10 0.0003788 0.0005295 0.0009053 0.03% Amr::timeStep() 10 0.0001631 0.0002266 0.0004901 0.01% Amr::InitAmr() 1 0.0002581 0.0002966 0.0004725 0.01% DistributionMapping::LeastUsedCPUs() 1 8.847e-06 0.0001973 0.0002333 0.01% Castro::clean_state() 62 0.0001309 0.0001518 0.0001618 0.00% StateDataPhysBCFunct::() 41 0.0001203 0.0001372 0.0001518 0.00% Castro::construct_old_source() 50 7.125e-05 8.457e-05 0.0001023 0.00% Castro::enforce_consistent_e() 1 7.898e-05 8.77e-05 9.537e-05 0.00% Amr::FinalizeInit() 1 3.034e-06 1.489e-05 8.747e-05 0.00% FabArray::ParallelCopy() 41 6.245e-05 6.946e-05 8.427e-05 0.00% Castro::do_old_sources() 10 5.085e-05 6.361e-05 8.275e-05 0.00% Castro::subcycle_advance_ctu() 10 4.277e-05 6.004e-05 7.78e-05 0.00% FabArrayBase::getCPC() 41 5.21e-05 6.593e-05 7.651e-05 0.00% Castro::do_new_sources() 10 5.499e-05 6.493e-05 7.46e-05 0.00% FillPatchSingleLevel 41 6.244e-05 6.949e-05 7.45e-05 0.00% Amr::writeSmallPlotFile() 1 2.551e-05 5.082e-05 6.848e-05 0.00% Castro::construct_old_gravity() 10 5.277e-05 5.933e-05 6.713e-05 0.00% Castro::construct_new_gravity() 10 4.369e-05 5.179e-05 6.565e-05 0.00% Castro::apply_source_to_state() 20 4.763e-05 5.483e-05 6.055e-05 0.00% Castro::finalize_advance() 10 5.127e-05 5.511e-05 5.86e-05 0.00% Castro::advance() 10 4.026e-05 4.404e-05 5.539e-05 0.00% Castro::enforce_speed_limit() 62 3.106e-05 3.609e-05 4.391e-05 0.00% FabArrayBase::CPC::define() 2 2.148e-05 2.922e-05 3.68e-05 0.00% Castro::check_for_nan() 20 2.418e-05 2.649e-05 2.847e-05 0.00% Castro::create_source_corrector() 10 1.165e-05 1.771e-05 2.148e-05 0.00% Gravity::swapTimeLevels() 10 9.391e-06 1.401e-05 1.863e-05 0.00% Castro::post_timestep() 10 8.527e-06 9.884e-06 1.141e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.34e-06 8.455e-06 1.05e-05 0.00% Amr::initSubcycle() 1 8.235e-06 9.073e-06 9.994e-06 0.00% Castro::computeNewDt() 9 6.609e-06 7.778e-06 9.791e-06 0.00% Gravity::set_mass_offset() 10 7.728e-06 8.677e-06 9.536e-06 0.00% Castro::post_init() 1 2.757e-06 4.286e-06 8.862e-06 0.00% Castro::FluxRegFineAdd() 10 6.044e-06 6.969e-06 8.497e-06 0.00% Castro::post_regrid() 1 1.759e-06 3.715e-06 8.212e-06 0.00% Amr::InitializeInit() 1 1.987e-06 3.195e-06 7.636e-06 0.00% Castro::retry_advance_ctu() 10 5.598e-06 6.469e-06 7.621e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.665e-06 4.607e-06 6.256e-06 0.00% Castro::computeInitialDt() 2 2.945e-06 3.89e-06 4.841e-06 0.00% Amr::init() 1 1.811e-06 2.134e-06 2.529e-06 0.00% Amr::initialInit() 1 1.287e-06 1.701e-06 2.277e-06 0.00% DistributionMapping::Distribute() 1 9.27e-07 1.069e-06 1.204e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.325 3.325 3.326 100.00% Amr::coarseTimeStep() 10 3.124 3.124 3.124 93.93% Amr::timeStep() 10 3.114 3.115 3.115 93.68% Castro::advance() 10 3.1 3.1 3.1 93.22% Castro::subcycle_advance_ctu() 10 3.027 3.031 3.049 91.68% Castro::do_advance_ctu() 10 3.027 3.031 3.049 91.67% Castro::construct_ctu_hydro_source() 10 2.113 2.188 2.226 66.93% Gravity::make_radial_gravity() 21 0.3386 0.3496 0.3692 11.10% Gravity::get_new_grav_vector() 11 0.2253 0.2269 0.228 6.86% Castro::construct_old_gravity() 10 0.2001 0.208 0.2247 6.76% Gravity::get_old_grav_vector() 10 0.1993 0.2072 0.2241 6.74% Castro::construct_new_gravity() 10 0.2 0.2011 0.2018 6.07% FillPatchIterator::Initialize 41 0.1549 0.1638 0.1901 5.72% Amr::init() 1 0.1873 0.1875 0.1875 5.64% Amr::initialInit() 1 0.1736 0.1738 0.1739 5.23% FillPatchSingleLevel 41 0.1159 0.126 0.1607 4.83% Castro::initialize_do_advance() 10 0.1473 0.1524 0.1582 4.76% MultiFab::min() 10 0.02931 0.07102 0.1491 4.48% Amr::InitializeInit() 1 0.05738 0.09949 0.1448 4.35% Amr::defBaseLevel() 1 0.05738 0.09949 0.1448 4.35% Castro::initData() 1 0.04355 0.08511 0.1295 3.89% Castro::expand_state() 10 0.1006 0.1082 0.1213 3.65% FabArray::ParallelCopy() 41 0.07475 0.08407 0.1197 3.60% Amr::FinalizeInit() 1 0.02918 0.07435 0.1162 3.50% Castro::estTimeStep() 21 0.0173 0.0689 0.1139 3.43% Castro::clean_state() 62 0.1058 0.1092 0.1106 3.33% Castro::computeInitialDt() 2 0.001771 0.04704 0.08919 2.68% FabArray::ParallelCopy_finish() 41 0.03296 0.04394 0.08555 2.57% FabArray::setVal() 143 0.05433 0.06821 0.07432 2.23% Castro::initialize_advance() 10 0.05058 0.06864 0.07276 2.19% Castro::computeTemp() 63 0.0667 0.06994 0.07155 2.15% Castro::do_new_sources() 10 0.05557 0.06223 0.06797 2.04% Castro::reset_internal_energy() 63 0.04856 0.05083 0.05201 1.56% Castro::do_old_sources() 10 0.03909 0.0458 0.04737 1.42% StateDataPhysBCFunct::() 41 0.0403 0.04186 0.04588 1.38% StateData::FillBoundary(geom) 41 0.04015 0.04172 0.04573 1.38% FabArray::ParallelCopy_nowait() 41 0.03404 0.04006 0.04205 1.26% Castro::normalize_species() 62 0.03333 0.03384 0.0344 1.03% Castro::construct_new_source() 50 0.02564 0.03011 0.03299 0.99% Gravity::interpolate_monopole_grav() 21 0.02819 0.02858 0.02905 0.87% Castro::post_init() 1 0.02639 0.02676 0.02697 0.81% Castro::construct_new_gravity_source() 10 0.01981 0.02366 0.0262 0.79% Amr::writePlotFile() 2 0.02338 0.02362 0.02387 0.72% Castro::apply_source_to_state() 20 0.01278 0.0147 0.01586 0.48% MultiFab::Saxpy() 20 0.01272 0.01465 0.0158 0.48% Castro::post_timestep() 10 0.0142 0.01454 0.01512 0.45% VisMF::Write(FabArray) 2 0.01233 0.0128 0.0151 0.45% Castro::check_for_nan() 20 0.01008 0.01135 0.01234 0.37% MultiFab::contains_nan() 20 0.01006 0.01133 0.01231 0.37% Castro::construct_old_source() 50 0.007328 0.01106 0.01189 0.36% Castro::construct_old_gravity_source() 10 0.007257 0.01097 0.01179 0.35% FabArray::setDomainBndry() 41 0.006771 0.009438 0.01114 0.33% Castro::computeNewDt() 9 0.006901 0.007522 0.008329 0.25% Castro::enforce_min_density() 62 0.005805 0.006226 0.006571 0.20% AmrLevel::AmrLevel(dm) 1 0.004317 0.004482 0.004748 0.14% StateData::define() 4 0.004309 0.004474 0.00474 0.14% Castro::swap_state_time_levels() 10 0.002916 0.003495 0.003711 0.11% Castro::post_regrid() 1 0.001428 0.00154 0.001834 0.06% Castro::finalize_do_advance() 10 0.0004571 0.0008916 0.001033 0.03% Amr::InitAmr() 1 0.0002674 0.0003057 0.0004825 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.429e-05 0.000203 0.0002401 0.01% DistributionMapping::LeastUsedCPUs() 1 8.847e-06 0.0001973 0.0002333 0.01% FabArrayBase::getCPC() 41 7.639e-05 9.515e-05 0.0001133 0.00% Castro::enforce_consistent_e() 1 7.898e-05 8.77e-05 9.537e-05 0.00% Amr::writeSmallPlotFile() 1 2.551e-05 5.082e-05 6.848e-05 0.00% Castro::finalize_advance() 10 5.753e-05 6.208e-05 6.521e-05 0.00% Castro::enforce_speed_limit() 62 3.106e-05 3.609e-05 4.391e-05 0.00% FabArrayBase::CPC::define() 2 2.148e-05 2.922e-05 3.68e-05 0.00% Castro::create_source_corrector() 10 1.165e-05 1.771e-05 2.148e-05 0.00% Gravity::swapTimeLevels() 10 9.391e-06 1.401e-05 1.863e-05 0.00% Amr::initSubcycle() 1 8.235e-06 9.073e-06 9.994e-06 0.00% Gravity::set_mass_offset() 10 7.728e-06 8.677e-06 9.536e-06 0.00% Castro::FluxRegFineAdd() 10 6.044e-06 6.969e-06 8.497e-06 0.00% Castro::retry_advance_ctu() 10 5.598e-06 6.469e-06 7.621e-06 0.00% DistributionMapping::Distribute() 1 9.27e-07 1.069e-06 1.204e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.02-10-g76d08651adb9) finalized