MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.02-10-g76d08651adb9) initialized Starting run at 06:31:38 UTC on 2022-02-16. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.02-10-g76d08651a Microphysics git describe: 22.02-2-gf51cc451 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015756329 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.352974176 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.332344407 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.311918978 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.310391207 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.309138394 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.329066763 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.305643455 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.302031555 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.296090465 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.297137222 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009801545 seconds Ending run at 06:31:42 UTC on 2022-02-16. Run time = 3.398922717 Run time without initialization = 3.159473297 Average number of zones advanced per microsecond: 0.830 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.398 ... 3.399 ... 3.399 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1246 2.1775 2.2177 65.25% Gravity::make_radial_gravity() 21 0.3574 0.3721 0.3972 11.69% Castro::estTimeStep() 21 0.02359 0.08824 0.16 4.71% Castro::initData() 1 0.03959 0.1012 0.1589 4.67% MultiFab::min() 10 0.02338 0.07028 0.1285 3.78% FabArray::ParallelCopy_finish() 41 0.03603 0.05529 0.09466 2.78% FabArray::setVal() 143 0.05191 0.06707 0.07296 2.15% Castro::reset_internal_energy() 63 0.04866 0.05259 0.05832 1.72% StateData::FillBoundary(geom) 41 0.03845 0.04378 0.04895 1.44% FabArray::ParallelCopy_nowait() 41 0.03367 0.04029 0.0444 1.31% Castro::normalize_species() 62 0.03291 0.03509 0.03703 1.09% FillPatchIterator::Initialize 41 0.02324 0.02946 0.03423 1.01% Gravity::interpolate_monopole_grav() 21 0.02878 0.02954 0.0303 0.89% Castro::construct_new_gravity_source() 10 0.0207 0.02379 0.02599 0.76% Castro::do_advance_ctu() 10 0.01375 0.01934 0.02333 0.69% Castro::expand_state() 10 0.01131 0.01771 0.0212 0.62% Castro::computeTemp() 63 0.01759 0.01951 0.02113 0.62% Castro::initialize_do_advance() 10 0.01052 0.01608 0.01777 0.52% VisMF::Write(FabArray) 2 0.01214 0.01321 0.0173 0.51% MultiFab::Saxpy() 20 0.01418 0.01509 0.01703 0.50% Amr::writePlotFile() 2 0.008467 0.01218 0.01375 0.40% Gravity::get_new_grav_vector() 11 0.009192 0.01089 0.01308 0.38% Castro::initialize_advance() 10 0.003961 0.01035 0.01308 0.38% Castro::construct_old_gravity_source() 10 0.00732 0.01059 0.01239 0.36% MultiFab::contains_nan() 20 0.01026 0.01132 0.01209 0.36% Gravity::get_old_grav_vector() 10 0.006667 0.008856 0.01066 0.31% FabArray::setDomainBndry() 41 0.006648 0.008992 0.01048 0.31% Amr::defBaseLevel() 1 0.006464 0.008308 0.009602 0.28% Castro::construct_new_source() 50 0.005723 0.006523 0.006874 0.20% Castro::enforce_min_density() 62 0.005934 0.006362 0.006847 0.20% StateData::define() 4 0.00426 0.005414 0.006269 0.18% Castro::swap_state_time_levels() 10 0.00194 0.004139 0.005204 0.15% main() 1 0.003283 0.003668 0.003883 0.11% Amr::coarseTimeStep() 10 0.0004247 0.0009862 0.002261 0.07% Castro::finalize_do_advance() 10 0.0004775 0.0009149 0.001071 0.03% Amr::timeStep() 10 0.0001614 0.0002163 0.0004876 0.01% Amr::InitAmr() 1 0.0003023 0.0004015 0.0004688 0.01% DistributionMapping::LeastUsedCPUs() 1 7.082e-06 8.693e-05 0.0002065 0.01% Castro::clean_state() 62 0.0001249 0.0001557 0.0001986 0.01% StateDataPhysBCFunct::() 41 0.0001215 0.0001374 0.0001551 0.00% Castro::enforce_consistent_e() 1 8.331e-05 0.0001122 0.0001465 0.00% Castro::construct_old_source() 50 6.212e-05 7.941e-05 0.0001055 0.00% FabArrayBase::getCPC() 41 4.592e-05 6.745e-05 9.903e-05 0.00% FabArray::ParallelCopy() 41 5.927e-05 6.929e-05 8.729e-05 0.00% FillPatchSingleLevel 41 5.998e-05 7.09e-05 8.167e-05 0.00% Castro::apply_source_to_state() 20 3.718e-05 5.787e-05 8.136e-05 0.00% Castro::subcycle_advance_ctu() 10 4.651e-05 6.071e-05 7.284e-05 0.00% Amr::FinalizeInit() 1 4.368e-06 1.445e-05 7.275e-05 0.00% Castro::do_new_sources() 10 4.927e-05 6.095e-05 7.232e-05 0.00% Castro::construct_old_gravity() 10 4.709e-05 5.724e-05 7.057e-05 0.00% Castro::do_old_sources() 10 4.862e-05 6.247e-05 6.901e-05 0.00% Amr::writeSmallPlotFile() 1 3.329e-05 5.643e-05 6.732e-05 0.00% Castro::finalize_advance() 10 5.148e-05 5.629e-05 6.328e-05 0.00% Castro::construct_new_gravity() 10 3.838e-05 5.008e-05 6.157e-05 0.00% Castro::advance() 10 3.754e-05 4.168e-05 4.858e-05 0.00% Castro::enforce_speed_limit() 62 2.903e-05 3.554e-05 4.799e-05 0.00% FabArrayBase::CPC::define() 2 2.134e-05 3.205e-05 4.464e-05 0.00% Castro::check_for_nan() 20 2.225e-05 2.675e-05 3.189e-05 0.00% Gravity::swapTimeLevels() 10 1.232e-05 1.649e-05 2.813e-05 0.00% Castro::create_source_corrector() 10 1.625e-05 1.944e-05 2.401e-05 0.00% Amr::initSubcycle() 1 8.41e-06 1.248e-05 1.548e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.774e-06 1.027e-05 1.501e-05 0.00% Castro::post_timestep() 10 8.653e-06 9.784e-06 1.168e-05 0.00% Castro::post_init() 1 3.534e-06 6.255e-06 1.032e-05 0.00% Gravity::set_mass_offset() 10 7.038e-06 8.444e-06 9.371e-06 0.00% Castro::computeNewDt() 9 6.993e-06 8.029e-06 8.967e-06 0.00% Castro::post_regrid() 1 2.444e-06 4.476e-06 8.175e-06 0.00% Castro::FluxRegFineAdd() 10 5.051e-06 6.417e-06 7.62e-06 0.00% Castro::retry_advance_ctu() 10 5.966e-06 6.653e-06 6.952e-06 0.00% Amr::InitializeInit() 1 2.458e-06 3.127e-06 5.993e-06 0.00% Castro::computeInitialDt() 2 3.305e-06 4.472e-06 5.823e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.077e-06 4.948e-06 5.673e-06 0.00% Amr::init() 1 1.977e-06 2.368e-06 3.068e-06 0.00% DistributionMapping::Distribute() 1 1.198e-06 1.402e-06 1.72e-06 0.00% Amr::initialInit() 1 1.439e-06 1.587e-06 1.704e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.398 3.399 3.399 100.00% Amr::coarseTimeStep() 10 3.146 3.146 3.146 92.55% Amr::timeStep() 10 3.135 3.135 3.136 92.26% Castro::advance() 10 3.12 3.121 3.121 91.82% Castro::subcycle_advance_ctu() 10 3.046 3.051 3.07 90.33% Castro::do_advance_ctu() 10 3.045 3.051 3.07 90.33% Castro::construct_ctu_hydro_source() 10 2.125 2.177 2.218 65.25% Gravity::make_radial_gravity() 21 0.3574 0.3721 0.3972 11.69% Castro::construct_old_gravity() 10 0.2157 0.2264 0.247 7.27% Gravity::get_old_grav_vector() 10 0.2149 0.2257 0.2464 7.25% Amr::init() 1 0.2388 0.2389 0.239 7.03% Gravity::get_new_grav_vector() 11 0.2336 0.2362 0.2388 7.03% Amr::initialInit() 1 0.2229 0.2234 0.2239 6.59% Castro::construct_new_gravity() 10 0.1975 0.1992 0.2009 5.91% FillPatchIterator::Initialize 41 0.1583 0.1782 0.1971 5.80% Amr::InitializeInit() 1 0.05536 0.1215 0.1821 5.36% Amr::defBaseLevel() 1 0.05536 0.1215 0.1821 5.36% Amr::FinalizeInit() 1 0.04128 0.1019 0.1676 4.93% FillPatchSingleLevel 41 0.1241 0.1397 0.1672 4.92% Castro::initData() 1 0.04331 0.1057 0.1641 4.83% Castro::initialize_do_advance() 10 0.1507 0.1571 0.1634 4.81% Castro::estTimeStep() 21 0.02359 0.08824 0.16 4.71% Castro::computeInitialDt() 2 0.002409 0.0631 0.1292 3.80% FabArray::ParallelCopy() 41 0.08057 0.09575 0.1286 3.78% MultiFab::min() 10 0.02338 0.07028 0.1285 3.78% Castro::clean_state() 62 0.1051 0.1125 0.1219 3.59% Castro::expand_state() 10 0.1022 0.1113 0.1208 3.56% FabArray::ParallelCopy_finish() 41 0.03603 0.05529 0.09466 2.78% Castro::computeTemp() 63 0.06625 0.0721 0.07931 2.33% Castro::initialize_advance() 10 0.04985 0.06936 0.07527 2.21% FabArray::setVal() 143 0.05191 0.06707 0.07296 2.15% Castro::do_new_sources() 10 0.05658 0.06205 0.06674 1.96% Castro::reset_internal_energy() 63 0.04866 0.05259 0.05832 1.72% Castro::do_old_sources() 10 0.04132 0.04769 0.05414 1.59% StateDataPhysBCFunct::() 41 0.03859 0.04391 0.04907 1.44% StateData::FillBoundary(geom) 41 0.03845 0.04378 0.04895 1.44% FabArray::ParallelCopy_nowait() 41 0.03381 0.04039 0.04448 1.31% Castro::post_init() 1 0.03768 0.03804 0.03838 1.13% Castro::normalize_species() 62 0.03291 0.03509 0.03703 1.09% Castro::construct_new_source() 50 0.02642 0.03031 0.03286 0.97% Gravity::interpolate_monopole_grav() 21 0.02878 0.02954 0.0303 0.89% Castro::construct_new_gravity_source() 10 0.0207 0.02379 0.02599 0.76% Amr::writePlotFile() 2 0.02481 0.02539 0.02595 0.76% VisMF::Write(FabArray) 2 0.01214 0.01321 0.0173 0.51% Castro::apply_source_to_state() 20 0.01422 0.01515 0.01709 0.50% MultiFab::Saxpy() 20 0.01418 0.01509 0.01703 0.50% Castro::post_timestep() 10 0.0139 0.01449 0.01482 0.44% Castro::construct_old_source() 50 0.007389 0.01067 0.01247 0.37% Castro::construct_old_gravity_source() 10 0.00732 0.01059 0.01239 0.36% Castro::check_for_nan() 20 0.01029 0.01135 0.01212 0.36% MultiFab::contains_nan() 20 0.01026 0.01132 0.01209 0.36% FabArray::setDomainBndry() 41 0.006648 0.008992 0.01048 0.31% Castro::computeNewDt() 9 0.007045 0.008046 0.008692 0.26% Castro::enforce_min_density() 62 0.005934 0.006362 0.006847 0.20% AmrLevel::AmrLevel(dm) 1 0.004269 0.005425 0.006284 0.18% StateData::define() 4 0.00426 0.005414 0.006269 0.18% Castro::swap_state_time_levels() 10 0.00194 0.004139 0.005204 0.15% Castro::post_regrid() 1 0.001432 0.002039 0.002581 0.08% Castro::finalize_do_advance() 10 0.0004775 0.0009149 0.001071 0.03% Amr::InitAmr() 1 0.0003129 0.0004139 0.0004834 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.349e-05 9.328e-05 0.0002135 0.01% DistributionMapping::LeastUsedCPUs() 1 7.082e-06 8.693e-05 0.0002065 0.01% Castro::enforce_consistent_e() 1 8.331e-05 0.0001122 0.0001465 0.00% FabArrayBase::getCPC() 41 7.942e-05 9.95e-05 0.0001437 0.00% Castro::finalize_advance() 10 5.688e-05 6.271e-05 7.057e-05 0.00% Amr::writeSmallPlotFile() 1 3.329e-05 5.643e-05 6.732e-05 0.00% Castro::enforce_speed_limit() 62 2.903e-05 3.554e-05 4.799e-05 0.00% FabArrayBase::CPC::define() 2 2.134e-05 3.205e-05 4.464e-05 0.00% Gravity::swapTimeLevels() 10 1.232e-05 1.649e-05 2.813e-05 0.00% Castro::create_source_corrector() 10 1.625e-05 1.944e-05 2.401e-05 0.00% Amr::initSubcycle() 1 8.41e-06 1.248e-05 1.548e-05 0.00% Gravity::set_mass_offset() 10 7.038e-06 8.444e-06 9.371e-06 0.00% Castro::FluxRegFineAdd() 10 5.051e-06 6.417e-06 7.62e-06 0.00% Castro::retry_advance_ctu() 10 5.966e-06 6.653e-06 6.952e-06 0.00% DistributionMapping::Distribute() 1 1.198e-06 1.402e-06 1.72e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.02-10-g76d08651adb9) finalized