MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.02-12-g1d566b101fa3) initialized Starting run at 06:31:57 UTC on 2022-02-17. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.02-12-g1d566b101 Microphysics git describe: 22.02-3-g1a131a41 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013584745 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.338713752 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.319330923 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.316773711 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.318241301 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.317914216 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.364590103 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.305988689 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.303307156 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.30431581 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.302047508 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010303405 seconds Ending run at 06:32:00 UTC on 2022-02-17. Run time = 3.406603789 Run time without initialization = 3.206558683 Average number of zones advanced per microsecond: 0.818 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.405 ... 3.406 ... 3.407 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0872 2.2022 2.2930 67.31% Gravity::make_radial_gravity() 21 0.3409 0.3543 0.3831 11.25% MultiFab::min() 10 0.01179 0.107 0.228 6.69% Castro::initData() 1 0.03832 0.08017 0.1367 4.01% Castro::estTimeStep() 21 0.0263 0.08447 0.1316 3.86% FabArray::ParallelCopy_finish() 41 0.03439 0.04767 0.08999 2.64% FabArray::setVal() 143 0.05773 0.07062 0.07916 2.32% Castro::reset_internal_energy() 63 0.0488 0.0504 0.05164 1.52% StateData::FillBoundary(geom) 41 0.0376 0.04222 0.04488 1.32% FabArray::ParallelCopy_nowait() 41 0.03002 0.04077 0.04377 1.28% FillPatchIterator::Initialize 41 0.02062 0.03027 0.03468 1.02% Castro::normalize_species() 62 0.03267 0.03318 0.03403 1.00% Gravity::interpolate_monopole_grav() 21 0.02797 0.02826 0.02875 0.84% Castro::construct_new_gravity_source() 10 0.01914 0.02343 0.02542 0.75% Castro::do_advance_ctu() 10 0.01258 0.01919 0.02216 0.65% Castro::expand_state() 10 0.009833 0.01824 0.02174 0.64% Castro::computeTemp() 63 0.01874 0.01919 0.02009 0.59% Castro::initialize_do_advance() 10 0.009077 0.01643 0.01914 0.56% VisMF::Write(FabArray) 2 0.01126 0.012 0.01556 0.46% MultiFab::Saxpy() 20 0.01122 0.01402 0.0155 0.45% Castro::initialize_advance() 10 0.01129 0.01198 0.01341 0.39% Amr::writePlotFile() 2 0.008554 0.01248 0.01333 0.39% MultiFab::contains_nan() 20 0.01024 0.01127 0.01317 0.39% Gravity::get_new_grav_vector() 11 0.008724 0.01103 0.01281 0.38% Castro::construct_old_gravity_source() 10 0.005958 0.01057 0.01217 0.36% FabArray::setDomainBndry() 41 0.00586 0.01009 0.01175 0.34% Gravity::get_old_grav_vector() 10 0.006027 0.009055 0.01071 0.31% Amr::defBaseLevel() 1 0.006416 0.006969 0.007792 0.23% Castro::construct_new_source() 50 0.005311 0.006421 0.0067 0.20% Castro::enforce_min_density() 62 0.005634 0.006061 0.006407 0.19% StateData::define() 4 0.004277 0.004575 0.005217 0.15% main() 1 0.003085 0.004756 0.005046 0.15% Castro::swap_state_time_levels() 10 0.002022 0.003573 0.004123 0.12% Amr::coarseTimeStep() 10 0.0003831 0.0006329 0.001136 0.03% Castro::finalize_do_advance() 10 0.00046 0.0008982 0.001042 0.03% Amr::timeStep() 10 0.0001658 0.0002132 0.0004473 0.01% Amr::InitAmr() 1 0.0002556 0.0002987 0.0004294 0.01% DistributionMapping::LeastUsedCPUs() 1 7.867e-06 0.0001392 0.0001782 0.01% StateDataPhysBCFunct::() 41 0.0001075 0.0001259 0.0001465 0.00% Castro::clean_state() 62 0.0001187 0.0001307 0.0001442 0.00% Castro::enforce_consistent_e() 1 8.287e-05 9.026e-05 0.0001019 0.00% Castro::construct_old_source() 50 4.314e-05 7.255e-05 9.337e-05 0.00% Castro::do_new_sources() 10 4.699e-05 6.142e-05 8.759e-05 0.00% Amr::FinalizeInit() 1 3.68e-06 1.501e-05 8.5e-05 0.00% Castro::do_old_sources() 10 4.13e-05 5.921e-05 7.319e-05 0.00% FillPatchSingleLevel 41 5.382e-05 6.236e-05 7.285e-05 0.00% Castro::subcycle_advance_ctu() 10 3.47e-05 4.903e-05 7.151e-05 0.00% FabArray::ParallelCopy() 41 5.336e-05 6.205e-05 6.672e-05 0.00% Castro::construct_old_gravity() 10 3.83e-05 5.158e-05 6.629e-05 0.00% Amr::writeSmallPlotFile() 1 2.506e-05 3.948e-05 6.088e-05 0.00% Castro::apply_source_to_state() 20 3.157e-05 4.498e-05 5.999e-05 0.00% FabArrayBase::getCPC() 41 4.438e-05 5.234e-05 5.96e-05 0.00% Castro::finalize_advance() 10 4.853e-05 5.201e-05 5.668e-05 0.00% Castro::construct_new_gravity() 10 3.611e-05 4.369e-05 5.292e-05 0.00% Castro::advance() 10 2.969e-05 3.914e-05 4.942e-05 0.00% Castro::check_for_nan() 20 2.178e-05 2.572e-05 3.798e-05 0.00% Castro::enforce_speed_limit() 62 2.6e-05 3.122e-05 3.403e-05 0.00% FabArrayBase::CPC::define() 2 2.161e-05 2.426e-05 2.779e-05 0.00% Castro::create_source_corrector() 10 1.105e-05 1.693e-05 2.496e-05 0.00% Gravity::swapTimeLevels() 10 9.012e-06 1.223e-05 1.382e-05 0.00% Castro::post_timestep() 10 8.647e-06 9.584e-06 1.094e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.77e-06 9.39e-06 1.089e-05 0.00% Castro::post_init() 1 2.728e-06 4.635e-06 9.915e-06 0.00% Amr::initSubcycle() 1 8.316e-06 9.22e-06 9.891e-06 0.00% Gravity::set_mass_offset() 10 6.463e-06 7.958e-06 9.372e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.213e-06 5.48e-06 8.863e-06 0.00% Castro::FluxRegFineAdd() 10 5.395e-06 6.595e-06 8.738e-06 0.00% Castro::computeNewDt() 9 6.599e-06 7.598e-06 8.566e-06 0.00% Castro::retry_advance_ctu() 10 5.151e-06 6.368e-06 8.018e-06 0.00% Castro::post_regrid() 1 1.905e-06 4.203e-06 6.563e-06 0.00% Amr::InitializeInit() 1 1.909e-06 2.656e-06 6.333e-06 0.00% Castro::computeInitialDt() 2 3.015e-06 3.901e-06 4.675e-06 0.00% Amr::init() 1 1.743e-06 2.173e-06 2.552e-06 0.00% Amr::initialInit() 1 1.208e-06 1.415e-06 1.722e-06 0.00% DistributionMapping::Distribute() 1 1.049e-06 1.26e-06 1.411e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.405 3.406 3.407 100.00% Amr::coarseTimeStep() 10 3.191 3.191 3.191 93.68% Amr::timeStep() 10 3.182 3.182 3.182 93.42% Castro::advance() 10 3.167 3.167 3.168 92.98% Castro::subcycle_advance_ctu() 10 3.089 3.095 3.102 91.05% Castro::do_advance_ctu() 10 3.089 3.095 3.102 91.05% Castro::construct_ctu_hydro_source() 10 2.087 2.202 2.293 67.31% Gravity::make_radial_gravity() 21 0.3409 0.3543 0.3831 11.25% Castro::construct_old_gravity() 10 0.2041 0.214 0.2375 6.97% Gravity::get_old_grav_vector() 10 0.2033 0.2133 0.237 6.96% Gravity::get_new_grav_vector() 11 0.2257 0.2273 0.2284 6.70% MultiFab::min() 10 0.01179 0.107 0.228 6.69% Castro::construct_new_gravity() 10 0.1999 0.201 0.202 5.93% Amr::init() 1 0.1994 0.1996 0.1996 5.86% Amr::initialInit() 1 0.1851 0.1855 0.1857 5.45% FillPatchIterator::Initialize 41 0.165 0.1714 0.1844 5.41% Castro::initialize_do_advance() 10 0.1421 0.1549 0.1595 4.68% FillPatchSingleLevel 41 0.1196 0.131 0.1579 4.64% Amr::InitializeInit() 1 0.05556 0.09818 0.1558 4.57% Amr::defBaseLevel() 1 0.05556 0.09818 0.1558 4.57% Castro::initData() 1 0.04242 0.08409 0.1409 4.14% Castro::estTimeStep() 21 0.0263 0.08447 0.1316 3.86% Amr::FinalizeInit() 1 0.02995 0.08727 0.1297 3.81% FabArray::ParallelCopy() 41 0.07683 0.08858 0.1201 3.53% Castro::expand_state() 10 0.1061 0.1097 0.1131 3.32% Castro::clean_state() 62 0.1058 0.108 0.1104 3.24% Castro::computeInitialDt() 2 0.001937 0.05957 0.1022 3.00% FabArray::ParallelCopy_finish() 41 0.03439 0.04767 0.08999 2.64% FabArray::setVal() 143 0.05773 0.07062 0.07916 2.32% Castro::initialize_advance() 10 0.06509 0.07262 0.07795 2.29% Castro::computeTemp() 63 0.06767 0.06959 0.07133 2.09% Castro::do_new_sources() 10 0.05303 0.06124 0.06424 1.89% Castro::reset_internal_energy() 63 0.0488 0.0504 0.05164 1.52% Castro::do_old_sources() 10 0.03547 0.04496 0.04876 1.43% StateDataPhysBCFunct::() 41 0.03771 0.04235 0.04499 1.32% StateData::FillBoundary(geom) 41 0.0376 0.04222 0.04488 1.32% FabArray::ParallelCopy_nowait() 41 0.0301 0.04085 0.04385 1.29% Castro::normalize_species() 62 0.03267 0.03318 0.03403 1.00% Castro::construct_new_source() 50 0.02445 0.02985 0.03212 0.94% Gravity::interpolate_monopole_grav() 21 0.02797 0.02826 0.02875 0.84% Castro::post_init() 1 0.02689 0.02718 0.02748 0.81% Castro::construct_new_gravity_source() 10 0.01914 0.02343 0.02542 0.75% Amr::writePlotFile() 2 0.02411 0.02448 0.0248 0.73% VisMF::Write(FabArray) 2 0.01126 0.012 0.01556 0.46% Castro::apply_source_to_state() 20 0.01125 0.01407 0.01554 0.46% MultiFab::Saxpy() 20 0.01122 0.01402 0.0155 0.45% Castro::post_timestep() 10 0.01405 0.01444 0.0149 0.44% Castro::check_for_nan() 20 0.01027 0.0113 0.01321 0.39% MultiFab::contains_nan() 20 0.01024 0.01127 0.01317 0.39% Castro::construct_old_source() 50 0.006001 0.01064 0.01226 0.36% Castro::construct_old_gravity_source() 10 0.005958 0.01057 0.01217 0.36% FabArray::setDomainBndry() 41 0.00586 0.01009 0.01175 0.34% Castro::computeNewDt() 9 0.006938 0.007612 0.008048 0.24% Castro::enforce_min_density() 62 0.005634 0.006061 0.006407 0.19% AmrLevel::AmrLevel(dm) 1 0.004285 0.004584 0.005228 0.15% StateData::define() 4 0.004277 0.004575 0.005217 0.15% Castro::swap_state_time_levels() 10 0.002022 0.003573 0.004123 0.12% Castro::post_regrid() 1 0.001463 0.00152 0.001755 0.05% Castro::finalize_do_advance() 10 0.00046 0.0008982 0.001042 0.03% Amr::InitAmr() 1 0.0002648 0.000308 0.0004393 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.335e-05 0.0001459 0.0001852 0.01% DistributionMapping::LeastUsedCPUs() 1 7.867e-06 0.0001392 0.0001782 0.01% Castro::enforce_consistent_e() 1 8.287e-05 9.026e-05 0.0001019 0.00% FabArrayBase::getCPC() 41 6.962e-05 7.659e-05 8.121e-05 0.00% Castro::finalize_advance() 10 5.485e-05 5.861e-05 6.507e-05 0.00% Amr::writeSmallPlotFile() 1 2.506e-05 3.948e-05 6.088e-05 0.00% Castro::enforce_speed_limit() 62 2.6e-05 3.122e-05 3.403e-05 0.00% FabArrayBase::CPC::define() 2 2.161e-05 2.426e-05 2.779e-05 0.00% Castro::create_source_corrector() 10 1.105e-05 1.693e-05 2.496e-05 0.00% Gravity::swapTimeLevels() 10 9.012e-06 1.223e-05 1.382e-05 0.00% Amr::initSubcycle() 1 8.316e-06 9.22e-06 9.891e-06 0.00% Gravity::set_mass_offset() 10 6.463e-06 7.958e-06 9.372e-06 0.00% Castro::FluxRegFineAdd() 10 5.395e-06 6.595e-06 8.738e-06 0.00% Castro::retry_advance_ctu() 10 5.151e-06 6.368e-06 8.018e-06 0.00% DistributionMapping::Distribute() 1 1.049e-06 1.26e-06 1.411e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.02-12-g1d566b101fa3) finalized