MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.02-14-gaa0dc39f50f7) initialized Starting run at 06:31:51 UTC on 2022-02-21. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.02-14-gaa0dc39f5 Microphysics git describe: 22.02-4-ga894d649 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013242089 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.335986398 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.31537849 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.311624913 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.312228326 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.312411647 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.316451947 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.304515595 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.305808453 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.30535566 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.305537469 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009202883 seconds Ending run at 06:31:54 UTC on 2022-02-21. Run time = 3.363724821 Run time without initialization = 3.138283767 Average number of zones advanced per microsecond: 0.835 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.362 ... 3.363 ... 3.364 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0456 2.1773 2.2474 66.81% Gravity::make_radial_gravity() 21 0.3329 0.347 0.3691 10.97% MultiFab::min() 10 0.01254 0.08798 0.225 6.69% Castro::initData() 1 0.04002 0.08597 0.1345 4.00% Castro::estTimeStep() 21 0.02649 0.07452 0.1202 3.57% FabArray::ParallelCopy_finish() 41 0.03154 0.04699 0.09044 2.69% FabArray::setVal() 143 0.05472 0.06807 0.07352 2.19% Castro::reset_internal_energy() 63 0.04715 0.04965 0.05155 1.53% StateData::FillBoundary(geom) 41 0.03686 0.041 0.04423 1.31% FabArray::ParallelCopy_nowait() 41 0.02849 0.03924 0.04293 1.28% Amr::writePlotFile() 2 0.03438 0.03705 0.03762 1.12% Castro::normalize_species() 62 0.03288 0.03324 0.03437 1.02% FillPatchIterator::Initialize 41 0.02057 0.02848 0.0331 0.98% Gravity::interpolate_monopole_grav() 21 0.02786 0.02827 0.02879 0.86% Castro::construct_new_gravity_source() 10 0.01889 0.02299 0.02462 0.73% Castro::do_advance_ctu() 10 0.01271 0.01955 0.02233 0.66% Castro::expand_state() 10 0.01057 0.01762 0.02079 0.62% Castro::computeTemp() 63 0.01757 0.0186 0.01961 0.58% Castro::initialize_do_advance() 10 0.009393 0.01494 0.01638 0.49% MultiFab::Saxpy() 20 0.01119 0.01429 0.01563 0.46% VisMF::Write(FabArray) 2 0.01177 0.01226 0.01489 0.44% Castro::initialize_advance() 10 0.007652 0.01084 0.01241 0.37% MultiFab::contains_nan() 20 0.009875 0.01104 0.01207 0.36% Castro::construct_old_gravity_source() 10 0.006054 0.01037 0.01177 0.35% Gravity::get_new_grav_vector() 11 0.009023 0.01059 0.01163 0.35% FabArray::setDomainBndry() 41 0.005898 0.009477 0.01151 0.34% Gravity::get_old_grav_vector() 10 0.006196 0.008589 0.009913 0.29% Amr::defBaseLevel() 1 0.006498 0.008282 0.009581 0.28% Castro::construct_new_source() 50 0.005343 0.006474 0.006922 0.21% Castro::enforce_min_density() 62 0.005575 0.006028 0.00627 0.19% StateData::define() 4 0.004355 0.005428 0.006244 0.19% main() 1 0.003155 0.004023 0.004525 0.13% Castro::swap_state_time_levels() 10 0.002699 0.003473 0.003713 0.11% Amr::coarseTimeStep() 10 0.0003484 0.0006267 0.001305 0.04% Castro::finalize_do_advance() 10 0.0004565 0.0009928 0.001214 0.04% Amr::InitAmr() 1 0.0002882 0.0004018 0.0004746 0.01% Amr::timeStep() 10 0.0001728 0.0002271 0.0004211 0.01% DistributionMapping::LeastUsedCPUs() 1 9.392e-06 0.0001039 0.0002351 0.01% Castro::clean_state() 62 0.0001236 0.000135 0.0001464 0.00% StateDataPhysBCFunct::() 41 0.000108 0.0001241 0.0001366 0.00% Castro::enforce_consistent_e() 1 7.736e-05 9.022e-05 0.0001033 0.00% Castro::construct_old_source() 50 3.968e-05 6.779e-05 9.292e-05 0.00% Castro::do_new_sources() 10 4.044e-05 5.897e-05 7.338e-05 0.00% Amr::FinalizeInit() 1 4.282e-06 1.353e-05 7.219e-05 0.00% Castro::do_old_sources() 10 3.738e-05 5.766e-05 7.071e-05 0.00% Amr::writeSmallPlotFile() 1 2.521e-05 5.627e-05 7.059e-05 0.00% FillPatchSingleLevel 41 5.64e-05 6.31e-05 7.026e-05 0.00% FabArray::ParallelCopy() 41 5.156e-05 6.077e-05 6.853e-05 0.00% Castro::subcycle_advance_ctu() 10 3.871e-05 4.924e-05 6.035e-05 0.00% FabArrayBase::getCPC() 41 4.426e-05 5.485e-05 5.992e-05 0.00% Castro::construct_old_gravity() 10 3.956e-05 4.965e-05 5.838e-05 0.00% Castro::finalize_advance() 10 5.15e-05 5.464e-05 5.69e-05 0.00% Castro::construct_new_gravity() 10 3.808e-05 4.633e-05 5.618e-05 0.00% Castro::apply_source_to_state() 20 3.284e-05 4.555e-05 5.549e-05 0.00% Castro::advance() 10 2.678e-05 3.823e-05 4.631e-05 0.00% Castro::enforce_speed_limit() 62 2.696e-05 3.125e-05 3.581e-05 0.00% FabArrayBase::CPC::define() 2 2.35e-05 2.71e-05 3.446e-05 0.00% Castro::check_for_nan() 20 2.037e-05 2.427e-05 2.768e-05 0.00% Castro::create_source_corrector() 10 1.298e-05 1.662e-05 1.947e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.297e-06 1.069e-05 1.797e-05 0.00% Castro::post_timestep() 10 8.959e-06 1.109e-05 1.781e-05 0.00% Amr::initSubcycle() 1 9.675e-06 1.263e-05 1.604e-05 0.00% Gravity::swapTimeLevels() 10 8.054e-06 1.124e-05 1.391e-05 0.00% Castro::post_init() 1 3.685e-06 5.898e-06 1.138e-05 0.00% Castro::computeNewDt() 9 6.396e-06 7.84e-06 9.277e-06 0.00% Gravity::set_mass_offset() 10 6.68e-06 7.815e-06 9.245e-06 0.00% Castro::retry_advance_ctu() 10 4.874e-06 6.355e-06 8.177e-06 0.00% Castro::FluxRegFineAdd() 10 4.747e-06 6.541e-06 8.146e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.152e-06 5.167e-06 6.933e-06 0.00% Amr::InitializeInit() 1 1.963e-06 2.984e-06 6.616e-06 0.00% Castro::post_regrid() 1 2.516e-06 3.8e-06 5.101e-06 0.00% Castro::computeInitialDt() 2 3.262e-06 3.934e-06 4.957e-06 0.00% Amr::init() 1 2.15e-06 2.588e-06 3.066e-06 0.00% Amr::initialInit() 1 1.399e-06 1.66e-06 2.119e-06 0.00% DistributionMapping::Distribute() 1 1.114e-06 1.359e-06 1.609e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.362 3.363 3.364 100.00% Amr::coarseTimeStep() 10 3.125 3.125 3.125 92.89% Amr::timeStep() 10 3.115 3.116 3.116 92.63% Castro::advance() 10 3.1 3.101 3.101 92.19% Castro::subcycle_advance_ctu() 10 3.027 3.031 3.043 90.45% Castro::do_advance_ctu() 10 3.027 3.031 3.043 90.45% Castro::construct_ctu_hydro_source() 10 2.046 2.177 2.247 66.81% Gravity::make_radial_gravity() 21 0.3329 0.347 0.3691 10.97% Gravity::get_new_grav_vector() 11 0.2241 0.2259 0.2275 6.76% MultiFab::min() 10 0.01254 0.08798 0.225 6.69% Amr::init() 1 0.2248 0.2249 0.225 6.69% Castro::construct_old_gravity() 10 0.1943 0.2062 0.2247 6.68% Gravity::get_old_grav_vector() 10 0.1935 0.2054 0.2241 6.66% Castro::construct_new_gravity() 10 0.1994 0.2007 0.2019 6.00% Amr::initialInit() 1 0.1846 0.1848 0.185 5.50% FillPatchIterator::Initialize 41 0.1585 0.1655 0.1846 5.49% FillPatchSingleLevel 41 0.1152 0.1276 0.1581 4.70% Castro::initialize_do_advance() 10 0.1438 0.1509 0.1568 4.66% Amr::InitializeInit() 1 0.05741 0.1054 0.1562 4.64% Amr::defBaseLevel() 1 0.0574 0.1054 0.1562 4.64% Castro::initData() 1 0.04348 0.08959 0.1382 4.11% Amr::FinalizeInit() 1 0.02858 0.0794 0.1274 3.79% Castro::estTimeStep() 21 0.02649 0.07452 0.1202 3.57% FabArray::ParallelCopy() 41 0.07352 0.08637 0.1191 3.54% Castro::expand_state() 10 0.09957 0.1077 0.1122 3.34% Castro::clean_state() 62 0.1031 0.1068 0.1102 3.28% Castro::computeInitialDt() 2 0.002011 0.05284 0.1008 3.00% FabArray::ParallelCopy_finish() 41 0.03154 0.04699 0.09044 2.69% Castro::initialize_advance() 10 0.05779 0.06964 0.07427 2.21% FabArray::setVal() 143 0.05472 0.06807 0.07352 2.19% Castro::computeTemp() 63 0.06472 0.06825 0.07116 2.12% Castro::do_new_sources() 10 0.05239 0.06093 0.06383 1.90% Castro::reset_internal_energy() 63 0.04715 0.04965 0.05155 1.53% Amr::writePlotFile() 2 0.04923 0.04931 0.04945 1.47% Castro::do_old_sources() 10 0.03613 0.04451 0.04761 1.42% StateDataPhysBCFunct::() 41 0.03697 0.04112 0.04435 1.32% StateData::FillBoundary(geom) 41 0.03686 0.041 0.04423 1.31% FabArray::ParallelCopy_nowait() 41 0.02858 0.03932 0.04301 1.28% Castro::normalize_species() 62 0.03288 0.03324 0.03437 1.02% Castro::construct_new_source() 50 0.02423 0.02947 0.0309 0.92% Gravity::interpolate_monopole_grav() 21 0.02786 0.02827 0.02879 0.86% Castro::post_init() 1 0.02575 0.02602 0.02622 0.78% Castro::construct_new_gravity_source() 10 0.01889 0.02299 0.02462 0.73% Castro::apply_source_to_state() 20 0.01123 0.01434 0.01569 0.47% MultiFab::Saxpy() 20 0.01119 0.01429 0.01563 0.46% VisMF::Write(FabArray) 2 0.01177 0.01226 0.01489 0.44% Castro::post_timestep() 10 0.01397 0.01441 0.01488 0.44% Castro::check_for_nan() 20 0.009895 0.01106 0.0121 0.36% MultiFab::contains_nan() 20 0.009875 0.01104 0.01207 0.36% Castro::construct_old_source() 50 0.006093 0.01044 0.01186 0.35% Castro::construct_old_gravity_source() 10 0.006054 0.01037 0.01177 0.35% FabArray::setDomainBndry() 41 0.005898 0.009477 0.01151 0.34% Castro::computeNewDt() 9 0.006761 0.007458 0.008096 0.24% Castro::enforce_min_density() 62 0.005575 0.006028 0.00627 0.19% AmrLevel::AmrLevel(dm) 1 0.004364 0.005439 0.006254 0.19% StateData::define() 4 0.004355 0.005428 0.006244 0.19% Castro::swap_state_time_levels() 10 0.002699 0.003473 0.003713 0.11% Castro::post_regrid() 1 0.00139 0.001492 0.001793 0.05% Castro::finalize_do_advance() 10 0.0004565 0.0009928 0.001214 0.04% Amr::InitAmr() 1 0.0002979 0.0004144 0.0004906 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.617e-05 0.0001104 0.0002434 0.01% DistributionMapping::LeastUsedCPUs() 1 9.392e-06 0.0001039 0.0002351 0.01% Castro::enforce_consistent_e() 1 7.736e-05 9.022e-05 0.0001033 0.00% FabArrayBase::getCPC() 41 6.777e-05 8.195e-05 9.4e-05 0.00% Amr::writeSmallPlotFile() 1 2.521e-05 5.627e-05 7.059e-05 0.00% Castro::finalize_advance() 10 5.625e-05 6.118e-05 6.505e-05 0.00% Castro::enforce_speed_limit() 62 2.696e-05 3.125e-05 3.581e-05 0.00% FabArrayBase::CPC::define() 2 2.35e-05 2.71e-05 3.446e-05 0.00% Castro::create_source_corrector() 10 1.298e-05 1.662e-05 1.947e-05 0.00% Amr::initSubcycle() 1 9.675e-06 1.263e-05 1.604e-05 0.00% Gravity::swapTimeLevels() 10 8.054e-06 1.124e-05 1.391e-05 0.00% Gravity::set_mass_offset() 10 6.68e-06 7.815e-06 9.245e-06 0.00% Castro::retry_advance_ctu() 10 4.874e-06 6.355e-06 8.177e-06 0.00% Castro::FluxRegFineAdd() 10 4.747e-06 6.541e-06 8.146e-06 0.00% DistributionMapping::Distribute() 1 1.114e-06 1.359e-06 1.609e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.02-14-gaa0dc39f50f7) finalized