MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.02-14-gaa0dc39f50f7) initialized Starting run at 06:31:28 UTC on 2022-02-22. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.02-14-gaa0dc39f5 Microphysics git describe: 22.02-4-ga894d649 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015317946 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.35792721 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.329547453 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.311294981 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.311612806 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.312155568 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.34424824 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.324217938 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.301458245 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.303779253 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.30148141 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010205752 seconds Ending run at 06:31:32 UTC on 2022-02-22. Run time = 3.446198067 Run time without initialization = 3.210628908 Average number of zones advanced per microsecond: 0.816 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.445 ... 3.446 ... 3.446 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1419 2.1861 2.2275 64.64% Gravity::make_radial_gravity() 21 0.3799 0.3944 0.4164 12.08% Castro::initData() 1 0.04196 0.08663 0.1556 4.52% Castro::estTimeStep() 21 0.03576 0.1047 0.1403 4.07% MultiFab::min() 10 0.03054 0.08038 0.1296 3.76% FabArray::ParallelCopy_finish() 41 0.04732 0.06188 0.102 2.96% FabArray::setVal() 143 0.05361 0.06718 0.07426 2.15% Castro::reset_internal_energy() 63 0.04975 0.05195 0.05398 1.57% StateData::FillBoundary(geom) 41 0.03985 0.04385 0.04941 1.43% FabArray::ParallelCopy_nowait() 41 0.03426 0.03967 0.04199 1.22% Castro::normalize_species() 62 0.0325 0.03464 0.03674 1.07% Gravity::interpolate_monopole_grav() 21 0.02823 0.02928 0.03222 0.93% FillPatchIterator::Initialize 41 0.0227 0.02847 0.03191 0.93% Castro::construct_new_gravity_source() 10 0.0205 0.02447 0.02852 0.83% Castro::do_advance_ctu() 10 0.01395 0.01947 0.02671 0.77% MultiFab::Saxpy() 20 0.01301 0.01537 0.02115 0.61% Castro::computeTemp() 63 0.01834 0.01949 0.0209 0.61% Castro::expand_state() 10 0.01131 0.01775 0.02067 0.60% Castro::initialize_do_advance() 10 0.01046 0.0157 0.01789 0.52% VisMF::Write(FabArray) 2 0.01212 0.01299 0.01675 0.49% Castro::initialize_advance() 10 0.003879 0.01069 0.01495 0.43% Amr::writePlotFile() 2 0.008978 0.01284 0.01457 0.42% Castro::construct_old_gravity_source() 10 0.007261 0.01075 0.01256 0.36% Gravity::get_new_grav_vector() 11 0.009502 0.01085 0.01227 0.36% MultiFab::contains_nan() 20 0.01024 0.01123 0.01217 0.35% Gravity::get_old_grav_vector() 10 0.006798 0.008906 0.01055 0.31% FabArray::setDomainBndry() 41 0.006669 0.00895 0.0105 0.30% Amr::defBaseLevel() 1 0.006565 0.007586 0.01013 0.29% Castro::construct_new_source() 50 0.005746 0.006556 0.00724 0.21% Castro::enforce_min_density() 62 0.005762 0.006384 0.00709 0.21% StateData::define() 4 0.004288 0.004878 0.00625 0.18% Castro::swap_state_time_levels() 10 0.002737 0.003844 0.005334 0.15% main() 1 0.003518 0.003983 0.004401 0.13% Amr::coarseTimeStep() 10 0.0002841 0.0008978 0.001789 0.05% Castro::finalize_do_advance() 10 0.0004651 0.001063 0.001307 0.04% Amr::InitAmr() 1 0.0002645 0.000339 0.0004586 0.01% Amr::timeStep() 10 0.0001684 0.0002255 0.0004456 0.01% DistributionMapping::LeastUsedCPUs() 1 7.36e-06 0.0001566 0.0002377 0.01% StateDataPhysBCFunct::() 41 0.0001091 0.0001377 0.000174 0.01% Castro::clean_state() 62 0.0001185 0.0001432 0.0001524 0.00% Castro::enforce_consistent_e() 1 8.782e-05 0.0001032 0.0001459 0.00% FabArray::ParallelCopy() 41 5.352e-05 7.364e-05 0.0001068 0.00% Castro::construct_old_source() 50 4.498e-05 6.791e-05 8.192e-05 0.00% Castro::subcycle_advance_ctu() 10 4.09e-05 5.345e-05 7.569e-05 0.00% Castro::enforce_speed_limit() 62 2.883e-05 3.892e-05 7.256e-05 0.00% Castro::do_new_sources() 10 5.06e-05 6.144e-05 7.15e-05 0.00% FabArrayBase::getCPC() 41 4.474e-05 5.71e-05 6.991e-05 0.00% FillPatchSingleLevel 41 5.47e-05 6.428e-05 6.959e-05 0.00% Amr::FinalizeInit() 1 4.784e-06 1.348e-05 6.633e-05 0.00% Amr::writeSmallPlotFile() 1 2.557e-05 5.117e-05 6.503e-05 0.00% Castro::do_old_sources() 10 4.226e-05 5.347e-05 6.113e-05 0.00% Castro::construct_old_gravity() 10 3.966e-05 5.169e-05 6.052e-05 0.00% Castro::finalize_advance() 10 5.187e-05 5.503e-05 5.995e-05 0.00% Castro::apply_source_to_state() 20 3.839e-05 4.86e-05 5.844e-05 0.00% Castro::advance() 10 3.349e-05 4.084e-05 5.814e-05 0.00% Castro::construct_new_gravity() 10 3.746e-05 4.445e-05 5.087e-05 0.00% FabArrayBase::CPC::define() 2 2.468e-05 2.879e-05 4.023e-05 0.00% Castro::check_for_nan() 20 2.272e-05 2.566e-05 2.7e-05 0.00% Castro::create_source_corrector() 10 1.341e-05 1.795e-05 2.371e-05 0.00% Castro::computeNewDt() 9 7.187e-06 9.716e-06 2.32e-05 0.00% Gravity::swapTimeLevels() 10 9.2e-06 1.394e-05 1.811e-05 0.00% Amr::initSubcycle() 1 8.207e-06 1.043e-05 1.525e-05 0.00% Castro::post_init() 1 3.691e-06 5.668e-06 1.415e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.862e-06 9.383e-06 1.407e-05 0.00% Castro::post_timestep() 10 9.237e-06 1.033e-05 1.288e-05 0.00% Gravity::set_mass_offset() 10 7.762e-06 8.681e-06 1.116e-05 0.00% Castro::FluxRegFineAdd() 10 5.567e-06 7.514e-06 9.28e-06 0.00% Castro::post_regrid() 1 3.065e-06 5.042e-06 8.682e-06 0.00% Amr::InitializeInit() 1 1.919e-06 3.061e-06 7.516e-06 0.00% Castro::retry_advance_ctu() 10 5.286e-06 6.306e-06 7.285e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.946e-06 5.367e-06 6.703e-06 0.00% Castro::computeInitialDt() 2 3.613e-06 4.694e-06 5.545e-06 0.00% Amr::init() 1 2.06e-06 2.439e-06 3.335e-06 0.00% Amr::initialInit() 1 1.394e-06 1.744e-06 2.189e-06 0.00% DistributionMapping::Distribute() 1 1e-06 1.477e-06 1.704e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.445 3.446 3.446 100.00% Amr::coarseTimeStep() 10 3.196 3.196 3.196 92.74% Amr::timeStep() 10 3.184 3.185 3.186 92.45% Castro::advance() 10 3.17 3.17 3.17 91.99% Castro::subcycle_advance_ctu() 10 3.095 3.1 3.118 90.49% Castro::do_advance_ctu() 10 3.095 3.1 3.118 90.48% Castro::construct_ctu_hydro_source() 10 2.142 2.186 2.227 64.64% Gravity::make_radial_gravity() 21 0.3799 0.3944 0.4164 12.08% Castro::construct_old_gravity() 10 0.2314 0.2435 0.2626 7.62% Gravity::get_old_grav_vector() 10 0.2307 0.2428 0.2619 7.60% Gravity::get_new_grav_vector() 11 0.2411 0.2426 0.2453 7.12% Amr::init() 1 0.2349 0.2351 0.2352 6.82% Amr::initialInit() 1 0.2187 0.2195 0.2203 6.39% Castro::construct_new_gravity() 10 0.205 0.2059 0.2081 6.04% FillPatchIterator::Initialize 41 0.1681 0.1832 0.2077 6.03% Amr::InitializeInit() 1 0.05993 0.1057 0.1787 5.19% Amr::defBaseLevel() 1 0.05992 0.1057 0.1787 5.19% FillPatchSingleLevel 41 0.1351 0.1458 0.1783 5.17% Castro::initialize_do_advance() 10 0.1539 0.1609 0.1692 4.91% Castro::initData() 1 0.0454 0.09085 0.1606 4.66% Amr::FinalizeInit() 1 0.04143 0.1138 0.1596 4.63% Castro::estTimeStep() 21 0.03576 0.1047 0.1403 4.07% FabArray::ParallelCopy() 41 0.08748 0.1017 0.1364 3.96% MultiFab::min() 10 0.03054 0.08038 0.1296 3.76% Castro::expand_state() 10 0.1075 0.1156 0.1262 3.66% Castro::computeInitialDt() 2 0.002456 0.07569 0.1213 3.52% Castro::clean_state() 62 0.1063 0.1116 0.117 3.40% FabArray::ParallelCopy_finish() 41 0.04732 0.06188 0.102 2.96% Castro::initialize_advance() 10 0.05107 0.0698 0.0751 2.18% Castro::computeTemp() 63 0.0685 0.07144 0.07488 2.17% FabArray::setVal() 143 0.05361 0.06718 0.07426 2.15% Castro::do_new_sources() 10 0.05634 0.06271 0.07084 2.06% Castro::do_old_sources() 10 0.03895 0.04694 0.05407 1.57% Castro::reset_internal_energy() 63 0.04975 0.05195 0.05398 1.57% StateDataPhysBCFunct::() 41 0.03998 0.04398 0.04955 1.44% StateData::FillBoundary(geom) 41 0.03985 0.04385 0.04941 1.43% FabArray::ParallelCopy_nowait() 41 0.03436 0.03976 0.04209 1.22% Castro::post_init() 1 0.03725 0.0377 0.03805 1.10% Castro::normalize_species() 62 0.0325 0.03464 0.03674 1.07% Castro::construct_new_source() 50 0.02625 0.03102 0.03559 1.03% Gravity::interpolate_monopole_grav() 21 0.02823 0.02928 0.03222 0.93% Castro::construct_new_gravity_source() 10 0.0205 0.02447 0.02852 0.83% Amr::writePlotFile() 2 0.02489 0.02583 0.02669 0.77% Castro::apply_source_to_state() 20 0.01306 0.01542 0.0212 0.62% MultiFab::Saxpy() 20 0.01301 0.01537 0.02115 0.61% VisMF::Write(FabArray) 2 0.01212 0.01299 0.01675 0.49% Castro::post_timestep() 10 0.01412 0.01473 0.01566 0.45% Castro::construct_old_source() 50 0.007306 0.01082 0.01263 0.37% Castro::construct_old_gravity_source() 10 0.007261 0.01075 0.01256 0.36% Castro::check_for_nan() 20 0.01026 0.01125 0.01219 0.35% MultiFab::contains_nan() 20 0.01024 0.01123 0.01217 0.35% FabArray::setDomainBndry() 41 0.006669 0.00895 0.0105 0.30% Castro::computeNewDt() 9 0.007187 0.008753 0.009998 0.29% Castro::enforce_min_density() 62 0.005762 0.006384 0.00709 0.21% AmrLevel::AmrLevel(dm) 1 0.004296 0.004887 0.006262 0.18% StateData::define() 4 0.004288 0.004878 0.00625 0.18% Castro::swap_state_time_levels() 10 0.002737 0.003844 0.005334 0.15% Castro::post_regrid() 1 0.001404 0.001807 0.002615 0.08% Castro::finalize_do_advance() 10 0.0004651 0.001063 0.001307 0.04% Amr::InitAmr() 1 0.0002735 0.0003494 0.000473 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.255e-05 0.0001634 0.0002455 0.01% DistributionMapping::LeastUsedCPUs() 1 7.36e-06 0.0001566 0.0002377 0.01% Castro::enforce_consistent_e() 1 8.782e-05 0.0001032 0.0001459 0.00% FabArrayBase::getCPC() 41 6.942e-05 8.589e-05 9.944e-05 0.00% Castro::enforce_speed_limit() 62 2.883e-05 3.892e-05 7.256e-05 0.00% Castro::finalize_advance() 10 5.824e-05 6.255e-05 6.923e-05 0.00% Amr::writeSmallPlotFile() 1 2.557e-05 5.117e-05 6.503e-05 0.00% FabArrayBase::CPC::define() 2 2.468e-05 2.879e-05 4.023e-05 0.00% Castro::create_source_corrector() 10 1.341e-05 1.795e-05 2.371e-05 0.00% Gravity::swapTimeLevels() 10 9.2e-06 1.394e-05 1.811e-05 0.00% Amr::initSubcycle() 1 8.207e-06 1.043e-05 1.525e-05 0.00% Gravity::set_mass_offset() 10 7.762e-06 8.681e-06 1.116e-05 0.00% Castro::FluxRegFineAdd() 10 5.567e-06 7.514e-06 9.28e-06 0.00% Castro::retry_advance_ctu() 10 5.286e-06 6.306e-06 7.285e-06 0.00% DistributionMapping::Distribute() 1 1e-06 1.477e-06 1.704e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.02-14-gaa0dc39f50f7) finalized