MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.02-14-gaa0dc39f50f7) initialized Starting run at 06:31:47 UTC on 2022-02-23. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.02-14-gaa0dc39f5 Microphysics git describe: 22.02-4-ga894d649 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01343386 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.354731478 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.342274742 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.319627808 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.319068179 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.319721561 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.330053198 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.306797563 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.305252883 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.30489695 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.304544144 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009404706 seconds Ending run at 06:31:50 UTC on 2022-02-23. Run time = 3.39786259 Run time without initialization = 3.220544446 Average number of zones advanced per microsecond: 0.814 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.397 ... 3.398 ... 3.398 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0872 2.2148 2.2702 66.81% Gravity::make_radial_gravity() 21 0.3397 0.3504 0.3636 10.70% MultiFab::min() 10 0.04613 0.105 0.2387 7.03% Castro::initData() 1 0.0578 0.08434 0.1163 3.42% FabArray::setVal() 143 0.06493 0.07178 0.07585 2.23% Castro::estTimeStep() 21 0.0223 0.05307 0.07563 2.23% FabArray::ParallelCopy_finish() 41 0.02975 0.04502 0.06787 2.00% Castro::reset_internal_energy() 63 0.04793 0.05031 0.05198 1.53% StateData::FillBoundary(geom) 41 0.03816 0.04229 0.04518 1.33% FabArray::ParallelCopy_nowait() 41 0.03807 0.0422 0.04494 1.32% FillPatchIterator::Initialize 41 0.02228 0.03162 0.03589 1.06% Castro::normalize_species() 62 0.03284 0.03347 0.03411 1.00% Gravity::interpolate_monopole_grav() 21 0.02827 0.02854 0.02893 0.85% Castro::construct_new_gravity_source() 10 0.02343 0.0244 0.02527 0.74% Castro::do_advance_ctu() 10 0.01915 0.02165 0.0237 0.70% Castro::expand_state() 10 0.01457 0.02014 0.02297 0.68% Castro::computeTemp() 63 0.01793 0.01886 0.01957 0.58% Castro::initialize_do_advance() 10 0.01415 0.01721 0.01858 0.55% MultiFab::Saxpy() 20 0.01451 0.01561 0.01638 0.48% VisMF::Write(FabArray) 2 0.01145 0.01199 0.01502 0.44% Castro::initialize_advance() 10 0.01115 0.01188 0.01337 0.39% MultiFab::contains_nan() 20 0.01052 0.01163 0.01259 0.37% FabArray::setDomainBndry() 41 0.006541 0.01053 0.01235 0.36% Castro::construct_old_gravity_source() 10 0.009322 0.01135 0.01233 0.36% Gravity::get_new_grav_vector() 11 0.01085 0.01153 0.01224 0.36% Amr::writePlotFile() 2 0.008061 0.011 0.01173 0.35% Gravity::get_old_grav_vector() 10 0.007692 0.009447 0.01018 0.30% Amr::defBaseLevel() 1 0.006384 0.007537 0.01009 0.30% Castro::construct_new_source() 50 0.006432 0.006835 0.007163 0.21% Castro::enforce_min_density() 62 0.005809 0.006305 0.006635 0.20% StateData::define() 4 0.004218 0.004821 0.006268 0.18% main() 1 0.003149 0.004232 0.004559 0.13% Castro::swap_state_time_levels() 10 0.002885 0.003772 0.00424 0.12% Castro::finalize_do_advance() 10 0.0008963 0.001124 0.001238 0.04% Amr::coarseTimeStep() 10 0.0004036 0.0006867 0.001202 0.04% Amr::InitAmr() 1 0.0002813 0.0003453 0.0006093 0.02% Amr::timeStep() 10 0.0001721 0.0002304 0.0004241 0.01% DistributionMapping::LeastUsedCPUs() 1 9.627e-06 0.0003089 0.0003833 0.01% Castro::clean_state() 62 0.0001254 0.0001368 0.0001536 0.00% StateDataPhysBCFunct::() 41 0.0001063 0.0001248 0.0001418 0.00% Castro::construct_old_source() 50 5.166e-05 8.521e-05 0.0001401 0.00% Amr::FinalizeInit() 1 3.896e-06 1.801e-05 0.0001098 0.00% Castro::enforce_consistent_e() 1 8.211e-05 9.006e-05 0.0001009 0.00% Castro::do_old_sources() 10 4.077e-05 6.607e-05 8.51e-05 0.00% Castro::subcycle_advance_ctu() 10 3.627e-05 5.818e-05 7.342e-05 0.00% Castro::do_new_sources() 10 4.62e-05 6.326e-05 7.306e-05 0.00% FabArrayBase::getCPC() 41 4.071e-05 5.703e-05 7.175e-05 0.00% FillPatchSingleLevel 41 5.487e-05 6.369e-05 7.094e-05 0.00% FabArray::ParallelCopy() 41 5.258e-05 6.125e-05 6.727e-05 0.00% Amr::writeSmallPlotFile() 1 2.558e-05 5.214e-05 6.374e-05 0.00% Castro::advance() 10 3.099e-05 4.257e-05 6.093e-05 0.00% Castro::construct_old_gravity() 10 4.423e-05 5.338e-05 6.052e-05 0.00% Castro::finalize_advance() 10 4.961e-05 5.508e-05 5.988e-05 0.00% Castro::construct_new_gravity() 10 3.78e-05 4.759e-05 5.861e-05 0.00% Castro::apply_source_to_state() 20 3.662e-05 4.548e-05 4.922e-05 0.00% Castro::enforce_speed_limit() 62 2.79e-05 3.49e-05 4.122e-05 0.00% FabArrayBase::CPC::define() 2 2.17e-05 2.584e-05 3.816e-05 0.00% Castro::check_for_nan() 20 2.297e-05 2.537e-05 2.79e-05 0.00% Castro::create_source_corrector() 10 1.292e-05 1.674e-05 1.998e-05 0.00% Amr::initSubcycle() 1 8.804e-06 1.071e-05 1.554e-05 0.00% Gravity::swapTimeLevels() 10 1.149e-05 1.328e-05 1.535e-05 0.00% Castro::post_timestep() 10 8.15e-06 1.056e-05 1.256e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.295e-06 9.212e-06 1.211e-05 0.00% Amr::InitializeInit() 1 1.859e-06 3.371e-06 1.123e-05 0.00% Castro::post_init() 1 3.199e-06 4.929e-06 1.098e-05 0.00% Gravity::set_mass_offset() 10 7.033e-06 8.232e-06 9.899e-06 0.00% Castro::computeNewDt() 9 7.181e-06 7.987e-06 8.518e-06 0.00% Castro::FluxRegFineAdd() 10 4.933e-06 6.527e-06 8.17e-06 0.00% Castro::retry_advance_ctu() 10 5.385e-06 6.41e-06 8.06e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.933e-06 4.835e-06 6.183e-06 0.00% Castro::post_regrid() 1 2.357e-06 3.566e-06 4.694e-06 0.00% Castro::computeInitialDt() 2 3.121e-06 3.867e-06 4.69e-06 0.00% Amr::init() 1 1.793e-06 2.546e-06 3.426e-06 0.00% Amr::initialInit() 1 1.427e-06 1.576e-06 1.806e-06 0.00% DistributionMapping::Distribute() 1 9.04e-07 1.195e-06 1.502e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.397 3.398 3.398 100.00% Amr::coarseTimeStep() 10 3.207 3.207 3.207 94.37% Amr::timeStep() 10 3.197 3.198 3.198 94.12% Castro::advance() 10 3.183 3.183 3.183 93.68% Castro::subcycle_advance_ctu() 10 3.107 3.11 3.115 91.67% Castro::do_advance_ctu() 10 3.107 3.11 3.115 91.67% Castro::construct_ctu_hydro_source() 10 2.087 2.215 2.27 66.81% Gravity::make_radial_gravity() 21 0.3397 0.3504 0.3636 10.70% MultiFab::min() 10 0.04613 0.105 0.2387 7.03% Gravity::get_new_grav_vector() 11 0.2263 0.2279 0.2294 6.75% Castro::construct_old_gravity() 10 0.2019 0.2112 0.2213 6.51% Gravity::get_old_grav_vector() 10 0.201 0.2103 0.2205 6.49% Castro::construct_new_gravity() 10 0.2007 0.2017 0.2027 5.97% FillPatchIterator::Initialize 41 0.1623 0.172 0.1798 5.29% Amr::init() 1 0.1765 0.1768 0.1769 5.21% Castro::initialize_do_advance() 10 0.1518 0.1594 0.1648 4.85% Amr::initialInit() 1 0.1629 0.1633 0.1635 4.81% FillPatchSingleLevel 41 0.1152 0.1298 0.1498 4.41% Amr::InitializeInit() 1 0.07956 0.1029 0.1339 3.94% Amr::defBaseLevel() 1 0.07956 0.1029 0.1339 3.94% Castro::initData() 1 0.06126 0.08813 0.1198 3.53% Castro::expand_state() 10 0.1066 0.1131 0.1178 3.47% Castro::clean_state() 62 0.1048 0.1081 0.1099 3.23% FabArray::ParallelCopy() 41 0.07252 0.08736 0.1078 3.17% Amr::FinalizeInit() 1 0.02938 0.06039 0.08373 2.46% Castro::initialize_advance() 10 0.06799 0.07305 0.07618 2.24% FabArray::setVal() 143 0.06493 0.07178 0.07585 2.23% Castro::estTimeStep() 21 0.0223 0.05307 0.07563 2.23% Castro::computeTemp() 63 0.06593 0.06917 0.07155 2.11% FabArray::ParallelCopy_finish() 41 0.02975 0.04502 0.06787 2.00% Castro::do_new_sources() 10 0.06345 0.06394 0.0645 1.90% Castro::computeInitialDt() 2 0.001795 0.03271 0.05592 1.65% Castro::reset_internal_energy() 63 0.04793 0.05031 0.05198 1.53% Castro::do_old_sources() 10 0.04326 0.04706 0.04911 1.45% StateDataPhysBCFunct::() 41 0.03827 0.04242 0.0453 1.33% StateData::FillBoundary(geom) 41 0.03816 0.04229 0.04518 1.33% FabArray::ParallelCopy_nowait() 41 0.03814 0.04228 0.04501 1.32% Castro::normalize_species() 62 0.03284 0.03347 0.03411 1.00% Castro::construct_new_source() 50 0.03059 0.03124 0.03174 0.93% Gravity::interpolate_monopole_grav() 21 0.02827 0.02854 0.02893 0.85% Castro::post_init() 1 0.02698 0.02719 0.02741 0.81% Castro::construct_new_gravity_source() 10 0.02343 0.0244 0.02527 0.74% Amr::writePlotFile() 2 0.02283 0.02299 0.02329 0.69% Castro::apply_source_to_state() 20 0.01456 0.01565 0.01642 0.48% MultiFab::Saxpy() 20 0.01451 0.01561 0.01638 0.48% VisMF::Write(FabArray) 2 0.01145 0.01199 0.01502 0.44% Castro::post_timestep() 10 0.01407 0.01442 0.01469 0.43% Castro::check_for_nan() 20 0.01055 0.01165 0.01262 0.37% MultiFab::contains_nan() 20 0.01052 0.01163 0.01259 0.37% Castro::construct_old_source() 50 0.009462 0.01143 0.01242 0.37% FabArray::setDomainBndry() 41 0.006541 0.01053 0.01235 0.36% Castro::construct_old_gravity_source() 10 0.009322 0.01135 0.01233 0.36% Castro::computeNewDt() 9 0.006839 0.007223 0.008092 0.24% Castro::enforce_min_density() 62 0.005809 0.006305 0.006635 0.20% AmrLevel::AmrLevel(dm) 1 0.004226 0.00483 0.00628 0.18% StateData::define() 4 0.004218 0.004821 0.006268 0.18% Castro::swap_state_time_levels() 10 0.002885 0.003772 0.00424 0.12% Castro::post_regrid() 1 0.001421 0.001499 0.001763 0.05% Castro::finalize_do_advance() 10 0.0008963 0.001124 0.001238 0.04% Amr::InitAmr() 1 0.0002905 0.000356 0.0006247 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.55e-05 0.000315 0.0003908 0.01% DistributionMapping::LeastUsedCPUs() 1 9.627e-06 0.0003089 0.0003833 0.01% FabArrayBase::getCPC() 41 6.561e-05 8.286e-05 0.0001099 0.00% Castro::enforce_consistent_e() 1 8.211e-05 9.006e-05 0.0001009 0.00% Castro::finalize_advance() 10 5.555e-05 6.161e-05 6.705e-05 0.00% Amr::writeSmallPlotFile() 1 2.558e-05 5.214e-05 6.374e-05 0.00% Castro::enforce_speed_limit() 62 2.79e-05 3.49e-05 4.122e-05 0.00% FabArrayBase::CPC::define() 2 2.17e-05 2.584e-05 3.816e-05 0.00% Castro::create_source_corrector() 10 1.292e-05 1.674e-05 1.998e-05 0.00% Amr::initSubcycle() 1 8.804e-06 1.071e-05 1.554e-05 0.00% Gravity::swapTimeLevels() 10 1.149e-05 1.328e-05 1.535e-05 0.00% Gravity::set_mass_offset() 10 7.033e-06 8.232e-06 9.899e-06 0.00% Castro::FluxRegFineAdd() 10 4.933e-06 6.527e-06 8.17e-06 0.00% Castro::retry_advance_ctu() 10 5.385e-06 6.41e-06 8.06e-06 0.00% DistributionMapping::Distribute() 1 9.04e-07 1.195e-06 1.502e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.02-14-gaa0dc39f50f7) finalized