MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.02-14-gaa0dc39f50f7) initialized Starting run at 06:31:40 UTC on 2022-02-24. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.02-14-gaa0dc39f5 Microphysics git describe: 22.02-5-g260ac616 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013229901 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.339728635 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.334018054 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.320049088 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.315886623 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.315577967 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.336874626 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.299121445 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.293985452 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.294457257 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.294251561 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009602523 seconds Ending run at 06:31:43 UTC on 2022-02-24. Run time = 3.352125558 Run time without initialization = 3.156946679 Average number of zones advanced per microsecond: 0.830 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.352 ... 3.352 ... 3.352 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0886 2.1939 2.2325 66.60% Gravity::make_radial_gravity() 21 0.3375 0.3486 0.3611 10.77% MultiFab::min() 10 0.02945 0.0718 0.1823 5.44% Castro::initData() 1 0.03945 0.08424 0.1329 3.96% Castro::estTimeStep() 21 0.02355 0.07071 0.1182 3.53% FabArray::setVal() 143 0.07164 0.07328 0.07655 2.28% FabArray::ParallelCopy_finish() 41 0.03322 0.04127 0.05629 1.68% Castro::reset_internal_energy() 63 0.04863 0.05057 0.05178 1.54% StateData::FillBoundary(geom) 41 0.0376 0.04199 0.04503 1.34% FabArray::ParallelCopy_nowait() 41 0.04029 0.04243 0.04422 1.32% FillPatchIterator::Initialize 41 0.02329 0.03131 0.03433 1.02% Castro::normalize_species() 62 0.03222 0.03313 0.03357 1.00% Gravity::interpolate_monopole_grav() 21 0.02748 0.02815 0.02861 0.85% Castro::construct_new_gravity_source() 10 0.02275 0.0246 0.02705 0.81% Castro::do_advance_ctu() 10 0.01755 0.02075 0.02422 0.72% Castro::expand_state() 10 0.01252 0.01829 0.02198 0.66% Castro::computeTemp() 63 0.01829 0.01914 0.01965 0.59% Castro::initialize_do_advance() 10 0.01159 0.01635 0.01771 0.53% MultiFab::Saxpy() 20 0.01515 0.01607 0.01706 0.51% VisMF::Write(FabArray) 2 0.01168 0.01222 0.01432 0.43% Castro::initialize_advance() 10 0.01046 0.01227 0.01423 0.42% Gravity::get_new_grav_vector() 11 0.01047 0.01151 0.01335 0.40% Castro::construct_old_gravity_source() 10 0.009442 0.01169 0.0122 0.36% MultiFab::contains_nan() 20 0.01049 0.01135 0.01203 0.36% FabArray::setDomainBndry() 41 0.006729 0.01026 0.01197 0.36% Amr::writePlotFile() 2 0.008734 0.01067 0.0113 0.34% Gravity::get_old_grav_vector() 10 0.007756 0.009369 0.01055 0.31% Amr::defBaseLevel() 1 0.006497 0.006954 0.007475 0.22% Castro::construct_new_source() 50 0.006541 0.006656 0.006886 0.21% Castro::enforce_min_density() 62 0.005952 0.006278 0.006571 0.20% StateData::define() 4 0.004245 0.004471 0.004704 0.14% main() 1 0.003713 0.003922 0.004155 0.12% Castro::swap_state_time_levels() 10 0.002943 0.003811 0.003951 0.12% Castro::finalize_do_advance() 10 0.0007406 0.001273 0.001581 0.05% Amr::coarseTimeStep() 10 0.0003931 0.0006607 0.001564 0.05% Amr::timeStep() 10 0.0001605 0.0002285 0.0004542 0.01% Amr::InitAmr() 1 0.0002774 0.0003071 0.0004348 0.01% DistributionMapping::LeastUsedCPUs() 1 7.695e-06 0.0002179 0.0003149 0.01% Castro::clean_state() 62 0.0001274 0.000141 0.0001514 0.00% StateDataPhysBCFunct::() 41 0.0001238 0.0001364 0.0001465 0.00% Castro::enforce_consistent_e() 1 7.997e-05 8.99e-05 9.995e-05 0.00% Castro::construct_old_source() 50 5.538e-05 7.494e-05 9.381e-05 0.00% Castro::subcycle_advance_ctu() 10 4.298e-05 5.639e-05 8.025e-05 0.00% Amr::FinalizeInit() 1 4.485e-06 1.468e-05 7.907e-05 0.00% FabArrayBase::getCPC() 41 4.181e-05 5.885e-05 7.697e-05 0.00% Castro::do_new_sources() 10 5.342e-05 6.135e-05 7.069e-05 0.00% FabArray::ParallelCopy() 41 5.654e-05 6.275e-05 6.919e-05 0.00% FillPatchSingleLevel 41 6.212e-05 6.459e-05 6.82e-05 0.00% Castro::do_old_sources() 10 5.159e-05 5.67e-05 6.809e-05 0.00% Amr::writeSmallPlotFile() 1 2.487e-05 5.211e-05 6.388e-05 0.00% Castro::construct_old_gravity() 10 4.783e-05 5.327e-05 6.065e-05 0.00% Castro::finalize_advance() 10 5.171e-05 5.495e-05 6.057e-05 0.00% Castro::apply_source_to_state() 20 4.08e-05 4.85e-05 5.411e-05 0.00% Castro::construct_new_gravity() 10 3.869e-05 4.646e-05 5.288e-05 0.00% Castro::advance() 10 3.298e-05 3.825e-05 4.306e-05 0.00% Castro::enforce_speed_limit() 62 2.94e-05 3.471e-05 3.988e-05 0.00% Castro::check_for_nan() 20 2.337e-05 2.544e-05 3.194e-05 0.00% FabArrayBase::CPC::define() 2 2.5e-05 2.731e-05 3.186e-05 0.00% Castro::create_source_corrector() 10 1.471e-05 1.68e-05 1.813e-05 0.00% Gravity::swapTimeLevels() 10 1.17e-05 1.362e-05 1.801e-05 0.00% Castro::post_timestep() 10 8.836e-06 1.009e-05 1.185e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.535e-06 9.255e-06 1.161e-05 0.00% Castro::post_init() 1 3.433e-06 4.946e-06 1.138e-05 0.00% Gravity::set_mass_offset() 10 6.963e-06 8.525e-06 1.066e-05 0.00% Amr::initSubcycle() 1 8.382e-06 9.308e-06 9.98e-06 0.00% Castro::computeNewDt() 9 7.401e-06 8.031e-06 9.067e-06 0.00% Castro::FluxRegFineAdd() 10 5.062e-06 6.676e-06 7.708e-06 0.00% Castro::retry_advance_ctu() 10 5.02e-06 6.195e-06 7.381e-06 0.00% Amr::InitializeInit() 1 1.938e-06 2.814e-06 7.065e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.923e-06 5.004e-06 6.495e-06 0.00% Castro::computeInitialDt() 2 3.141e-06 3.961e-06 4.77e-06 0.00% Castro::post_regrid() 1 2.243e-06 3.083e-06 3.974e-06 0.00% Amr::init() 1 2.241e-06 2.791e-06 3.676e-06 0.00% Amr::initialInit() 1 1.411e-06 1.543e-06 1.85e-06 0.00% DistributionMapping::Distribute() 1 1.004e-06 1.188e-06 1.382e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.352 3.352 3.352 100.00% Amr::coarseTimeStep() 10 3.143 3.143 3.143 93.77% Amr::timeStep() 10 3.134 3.134 3.135 93.52% Castro::advance() 10 3.119 3.12 3.12 93.07% Castro::subcycle_advance_ctu() 10 3.043 3.045 3.047 90.89% Castro::do_advance_ctu() 10 3.043 3.045 3.047 90.89% Castro::construct_ctu_hydro_source() 10 2.089 2.194 2.233 66.60% Gravity::make_radial_gravity() 21 0.3375 0.3486 0.3611 10.77% Gravity::get_new_grav_vector() 11 0.2234 0.225 0.2264 6.75% Castro::construct_old_gravity() 10 0.2024 0.2109 0.2212 6.60% Gravity::get_old_grav_vector() 10 0.2015 0.2101 0.2204 6.57% Castro::construct_new_gravity() 10 0.1978 0.1986 0.1994 5.95% Amr::init() 1 0.1946 0.1947 0.1948 5.81% MultiFab::min() 10 0.02945 0.0718 0.1823 5.44% Amr::initialInit() 1 0.1812 0.1815 0.1817 5.42% FillPatchIterator::Initialize 41 0.1614 0.1676 0.1765 5.26% Castro::initialize_do_advance() 10 0.1415 0.1542 0.1624 4.84% Amr::InitializeInit() 1 0.05698 0.1024 0.1516 4.52% Amr::defBaseLevel() 1 0.05697 0.1024 0.1516 4.52% Castro::initData() 1 0.04345 0.08821 0.1366 4.07% FillPatchSingleLevel 41 0.1176 0.126 0.1364 4.07% Amr::FinalizeInit() 1 0.03005 0.07912 0.1245 3.71% Castro::estTimeStep() 21 0.02355 0.07071 0.1182 3.53% Castro::expand_state() 10 0.1013 0.109 0.1164 3.47% Castro::clean_state() 62 0.1057 0.1083 0.1103 3.29% FabArray::ParallelCopy() 41 0.07544 0.08385 0.09675 2.89% Castro::computeInitialDt() 2 0.001721 0.05096 0.09641 2.88% Castro::initialize_advance() 10 0.07242 0.07428 0.07661 2.29% FabArray::setVal() 143 0.07164 0.07328 0.07655 2.28% Castro::computeTemp() 63 0.06693 0.0697 0.07133 2.13% Castro::do_new_sources() 10 0.06122 0.06395 0.06725 2.01% FabArray::ParallelCopy_finish() 41 0.03322 0.04127 0.05629 1.68% Castro::reset_internal_energy() 63 0.04863 0.05057 0.05178 1.54% Castro::do_old_sources() 10 0.04608 0.04811 0.049 1.46% StateDataPhysBCFunct::() 41 0.03775 0.04213 0.04517 1.35% StateData::FillBoundary(geom) 41 0.0376 0.04199 0.04503 1.34% FabArray::ParallelCopy_nowait() 41 0.0404 0.04252 0.0443 1.32% Castro::construct_new_source() 50 0.02936 0.03126 0.03363 1.00% Castro::normalize_species() 62 0.03222 0.03313 0.03357 1.00% Gravity::interpolate_monopole_grav() 21 0.02748 0.02815 0.02861 0.85% Castro::post_init() 1 0.02728 0.0275 0.02775 0.83% Castro::construct_new_gravity_source() 10 0.02275 0.0246 0.02705 0.81% Amr::writePlotFile() 2 0.02273 0.0229 0.02306 0.69% Castro::apply_source_to_state() 20 0.0152 0.01612 0.01712 0.51% MultiFab::Saxpy() 20 0.01515 0.01607 0.01706 0.51% Castro::post_timestep() 10 0.01422 0.01456 0.01485 0.44% VisMF::Write(FabArray) 2 0.01168 0.01222 0.01432 0.43% Castro::construct_old_source() 50 0.009497 0.01177 0.01229 0.37% Castro::construct_old_gravity_source() 10 0.009442 0.01169 0.0122 0.36% Castro::check_for_nan() 20 0.01052 0.01138 0.01206 0.36% MultiFab::contains_nan() 20 0.01049 0.01135 0.01203 0.36% FabArray::setDomainBndry() 41 0.006729 0.01026 0.01197 0.36% Castro::computeNewDt() 9 0.006749 0.007279 0.007938 0.24% Castro::enforce_min_density() 62 0.005952 0.006278 0.006571 0.20% AmrLevel::AmrLevel(dm) 1 0.004255 0.00448 0.004712 0.14% StateData::define() 4 0.004245 0.004471 0.004704 0.14% Castro::swap_state_time_levels() 10 0.002943 0.003811 0.003951 0.12% Castro::post_regrid() 1 0.001483 0.001553 0.00181 0.05% Castro::finalize_do_advance() 10 0.0007406 0.001273 0.001581 0.05% Amr::InitAmr() 1 0.0002867 0.0003164 0.0004448 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.33e-05 0.000224 0.0003226 0.01% DistributionMapping::LeastUsedCPUs() 1 7.695e-06 0.0002179 0.0003149 0.01% FabArrayBase::getCPC() 41 6.723e-05 8.616e-05 0.0001085 0.00% Castro::enforce_consistent_e() 1 7.997e-05 8.99e-05 9.995e-05 0.00% Castro::finalize_advance() 10 5.874e-05 6.162e-05 6.721e-05 0.00% Amr::writeSmallPlotFile() 1 2.487e-05 5.211e-05 6.388e-05 0.00% Castro::enforce_speed_limit() 62 2.94e-05 3.471e-05 3.988e-05 0.00% FabArrayBase::CPC::define() 2 2.5e-05 2.731e-05 3.186e-05 0.00% Castro::create_source_corrector() 10 1.471e-05 1.68e-05 1.813e-05 0.00% Gravity::swapTimeLevels() 10 1.17e-05 1.362e-05 1.801e-05 0.00% Gravity::set_mass_offset() 10 6.963e-06 8.525e-06 1.066e-05 0.00% Amr::initSubcycle() 1 8.382e-06 9.308e-06 9.98e-06 0.00% Castro::FluxRegFineAdd() 10 5.062e-06 6.676e-06 7.708e-06 0.00% Castro::retry_advance_ctu() 10 5.02e-06 6.195e-06 7.381e-06 0.00% DistributionMapping::Distribute() 1 1.004e-06 1.188e-06 1.382e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.02-14-gaa0dc39f50f7) finalized