MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.02-14-gaa0dc39f50f7) initialized Starting run at 06:31:38 UTC on 2022-02-25. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.02-14-gaa0dc39f5 Microphysics git describe: 22.02-5-g260ac616 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012944953 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.343073012 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.326297548 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.319056686 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.317761859 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.31881872 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.34072866 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.304525745 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.296173919 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.295835273 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.295096152 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009431717 seconds Ending run at 06:31:41 UTC on 2022-02-25. Run time = 3.352026925 Run time without initialization = 3.170287635 Average number of zones advanced per microsecond: 0.827 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.351 ... 3.352 ... 3.352 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1376 2.2050 2.2431 66.92% Gravity::make_radial_gravity() 21 0.3407 0.3511 0.3596 10.73% MultiFab::min() 10 0.02276 0.06192 0.1328 3.96% Castro::initData() 1 0.03944 0.08018 0.1205 3.60% Castro::estTimeStep() 21 0.02033 0.06443 0.1088 3.25% FabArray::setVal() 143 0.06929 0.07396 0.078 2.33% Castro::reset_internal_energy() 63 0.04996 0.05056 0.05163 1.54% FabArray::ParallelCopy_finish() 41 0.03258 0.03816 0.05128 1.53% StateData::FillBoundary(geom) 41 0.03922 0.0427 0.04636 1.38% FabArray::ParallelCopy_nowait() 41 0.04105 0.043 0.04398 1.31% FillPatchIterator::Initialize 41 0.02408 0.03198 0.0359 1.07% Castro::normalize_species() 62 0.03301 0.03389 0.03467 1.03% Gravity::interpolate_monopole_grav() 21 0.02841 0.02865 0.02944 0.88% Castro::construct_new_gravity_source() 10 0.02284 0.02498 0.0268 0.80% Castro::do_advance_ctu() 10 0.01757 0.02148 0.02468 0.74% Castro::expand_state() 10 0.01536 0.01971 0.02225 0.66% Castro::computeTemp() 63 0.01743 0.01888 0.01976 0.59% Castro::initialize_do_advance() 10 0.01382 0.01709 0.01836 0.55% MultiFab::Saxpy() 20 0.01574 0.01635 0.01703 0.51% Castro::initialize_advance() 10 0.01061 0.01248 0.01466 0.44% VisMF::Write(FabArray) 2 0.01154 0.01197 0.01422 0.42% Gravity::get_new_grav_vector() 11 0.01054 0.01173 0.01373 0.41% Castro::construct_old_gravity_source() 10 0.01178 0.01218 0.01281 0.38% MultiFab::contains_nan() 20 0.01093 0.01156 0.01252 0.37% FabArray::setDomainBndry() 41 0.00793 0.01072 0.0122 0.36% Amr::writePlotFile() 2 0.008358 0.01074 0.01129 0.34% Gravity::get_old_grav_vector() 10 0.008566 0.009482 0.01055 0.31% Amr::defBaseLevel() 1 0.006662 0.00697 0.008684 0.26% Castro::construct_new_source() 50 0.0064 0.006687 0.006952 0.21% Castro::enforce_min_density() 62 0.006059 0.006331 0.006875 0.21% StateData::define() 4 0.004347 0.004541 0.005666 0.17% main() 1 0.003384 0.003953 0.004207 0.13% Castro::swap_state_time_levels() 10 0.002939 0.003786 0.003934 0.12% Castro::finalize_do_advance() 10 0.001122 0.001343 0.00146 0.04% Amr::coarseTimeStep() 10 0.000391 0.0006449 0.001434 0.04% Amr::InitAmr() 1 0.0002735 0.0003538 0.0007429 0.02% DistributionMapping::LeastUsedCPUs() 1 1.431e-05 0.0006241 0.0007321 0.02% Amr::timeStep() 10 0.0001799 0.000285 0.0006347 0.02% Castro::clean_state() 62 0.0001262 0.0001391 0.0001543 0.00% StateDataPhysBCFunct::() 41 0.0001046 0.0001291 0.000142 0.00% Castro::enforce_consistent_e() 1 8.186e-05 9.461e-05 0.0001198 0.00% Castro::construct_old_source() 50 6.28e-05 7.594e-05 9.405e-05 0.00% Amr::FinalizeInit() 1 4.268e-06 1.525e-05 8.255e-05 0.00% Castro::do_old_sources() 10 4.966e-05 6.093e-05 7.218e-05 0.00% FillPatchSingleLevel 41 5.523e-05 6.474e-05 7.107e-05 0.00% FabArrayBase::getCPC() 41 4.324e-05 5.781e-05 6.933e-05 0.00% Castro::construct_old_gravity() 10 4.515e-05 5.748e-05 6.93e-05 0.00% Castro::subcycle_advance_ctu() 10 4.534e-05 5.931e-05 6.927e-05 0.00% FabArray::ParallelCopy() 41 5.627e-05 6.306e-05 6.63e-05 0.00% Castro::do_new_sources() 10 5.008e-05 5.948e-05 6.568e-05 0.00% Amr::writeSmallPlotFile() 1 2.597e-05 5.154e-05 6.081e-05 0.00% Castro::finalize_advance() 10 5.416e-05 5.611e-05 5.921e-05 0.00% Castro::construct_new_gravity() 10 3.893e-05 4.471e-05 5.329e-05 0.00% Castro::apply_source_to_state() 20 3.723e-05 4.468e-05 5.062e-05 0.00% Castro::advance() 10 3.38e-05 3.915e-05 4.66e-05 0.00% Castro::enforce_speed_limit() 62 3.127e-05 3.406e-05 3.982e-05 0.00% FabArrayBase::CPC::define() 2 2.283e-05 2.798e-05 3.588e-05 0.00% Castro::check_for_nan() 20 2.317e-05 2.482e-05 2.772e-05 0.00% Amr::initSubcycle() 1 8.446e-06 1.178e-05 2.316e-05 0.00% Castro::create_source_corrector() 10 1.576e-05 1.734e-05 1.875e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.106e-06 9.613e-06 1.506e-05 0.00% Gravity::swapTimeLevels() 10 1.189e-05 1.334e-05 1.48e-05 0.00% Castro::post_init() 1 3.833e-06 5.308e-06 1.096e-05 0.00% Castro::post_timestep() 10 8.749e-06 9.798e-06 1.077e-05 0.00% Gravity::set_mass_offset() 10 7.841e-06 8.495e-06 9.762e-06 0.00% Castro::computeNewDt() 9 7.173e-06 7.868e-06 9.033e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.068e-06 5.512e-06 8.788e-06 0.00% Castro::FluxRegFineAdd() 10 5.372e-06 6.864e-06 7.775e-06 0.00% Castro::retry_advance_ctu() 10 5.338e-06 6.284e-06 6.919e-06 0.00% Amr::InitializeInit() 1 2.105e-06 3.284e-06 6.555e-06 0.00% Castro::post_regrid() 1 2.084e-06 3.491e-06 5.948e-06 0.00% Castro::computeInitialDt() 2 3.353e-06 4.216e-06 4.812e-06 0.00% Amr::init() 1 1.859e-06 2.67e-06 3.6e-06 0.00% Amr::initialInit() 1 1.329e-06 1.788e-06 2.761e-06 0.00% DistributionMapping::Distribute() 1 9.81e-07 1.399e-06 2.485e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.351 3.352 3.352 100.00% Amr::coarseTimeStep() 10 3.157 3.157 3.157 94.17% Amr::timeStep() 10 3.147 3.147 3.148 93.92% Castro::advance() 10 3.132 3.133 3.133 93.46% Castro::subcycle_advance_ctu() 10 3.056 3.057 3.059 91.26% Castro::do_advance_ctu() 10 3.056 3.057 3.059 91.26% Castro::construct_ctu_hydro_source() 10 2.138 2.205 2.243 66.92% Gravity::make_radial_gravity() 21 0.3407 0.3511 0.3596 10.73% Gravity::get_new_grav_vector() 11 0.2268 0.228 0.2294 6.84% Castro::construct_old_gravity() 10 0.2029 0.2114 0.2189 6.53% Gravity::get_old_grav_vector() 10 0.2021 0.2105 0.2181 6.51% Castro::construct_new_gravity() 10 0.2028 0.2039 0.2048 6.11% Amr::init() 1 0.1806 0.1812 0.1813 5.41% FillPatchIterator::Initialize 41 0.1639 0.1669 0.1717 5.12% Amr::initialInit() 1 0.1672 0.168 0.1682 5.02% Castro::initialize_do_advance() 10 0.1472 0.1565 0.1613 4.81% Amr::InitializeInit() 1 0.05818 0.09902 0.1399 4.17% Amr::defBaseLevel() 1 0.05818 0.09901 0.1399 4.17% MultiFab::min() 10 0.02276 0.06192 0.1328 3.96% FillPatchSingleLevel 41 0.1176 0.1242 0.1319 3.94% Castro::initData() 1 0.04308 0.08421 0.1241 3.70% Castro::expand_state() 10 0.1047 0.1101 0.1143 3.41% Castro::clean_state() 62 0.1063 0.1088 0.1108 3.31% Amr::FinalizeInit() 1 0.02726 0.06897 0.1099 3.28% Castro::estTimeStep() 21 0.02033 0.06443 0.1088 3.25% FabArray::ParallelCopy() 41 0.0753 0.0813 0.09249 2.76% Castro::computeInitialDt() 2 0.001735 0.04321 0.08415 2.51% FabArray::setVal() 143 0.06929 0.07396 0.078 2.33% Castro::initialize_advance() 10 0.07339 0.07526 0.07692 2.29% Castro::computeTemp() 63 0.06758 0.06944 0.07119 2.12% Castro::do_new_sources() 10 0.06065 0.06446 0.06879 2.05% Castro::reset_internal_energy() 63 0.04996 0.05056 0.05163 1.54% FabArray::ParallelCopy_finish() 41 0.03258 0.03816 0.05128 1.53% Castro::do_old_sources() 10 0.04807 0.04859 0.04899 1.46% StateDataPhysBCFunct::() 41 0.03935 0.04283 0.04646 1.39% StateData::FillBoundary(geom) 41 0.03922 0.0427 0.04636 1.38% FabArray::ParallelCopy_nowait() 41 0.04114 0.04308 0.04406 1.31% Castro::normalize_species() 62 0.03301 0.03389 0.03467 1.03% Castro::construct_new_source() 50 0.02931 0.03166 0.03364 1.00% Gravity::interpolate_monopole_grav() 21 0.02841 0.02865 0.02944 0.88% Castro::construct_new_gravity_source() 10 0.02284 0.02498 0.0268 0.80% Castro::post_init() 1 0.02497 0.02514 0.02528 0.75% Amr::writePlotFile() 2 0.02258 0.02271 0.02294 0.68% Castro::apply_source_to_state() 20 0.01578 0.0164 0.01707 0.51% MultiFab::Saxpy() 20 0.01574 0.01635 0.01703 0.51% Castro::post_timestep() 10 0.01393 0.01435 0.01477 0.44% VisMF::Write(FabArray) 2 0.01154 0.01197 0.01422 0.42% Castro::construct_old_source() 50 0.01184 0.01226 0.01291 0.39% Castro::construct_old_gravity_source() 10 0.01178 0.01218 0.01281 0.38% Castro::check_for_nan() 20 0.01095 0.01159 0.01254 0.37% MultiFab::contains_nan() 20 0.01093 0.01156 0.01252 0.37% FabArray::setDomainBndry() 41 0.00793 0.01072 0.0122 0.36% Castro::computeNewDt() 9 0.006851 0.007803 0.008658 0.26% Castro::enforce_min_density() 62 0.006059 0.006331 0.006875 0.21% AmrLevel::AmrLevel(dm) 1 0.004358 0.00455 0.005681 0.17% StateData::define() 4 0.004347 0.004541 0.005666 0.17% Castro::swap_state_time_levels() 10 0.002939 0.003786 0.003934 0.12% Castro::post_regrid() 1 0.00149 0.001536 0.001573 0.05% Castro::finalize_do_advance() 10 0.001122 0.001343 0.00146 0.04% Amr::InitAmr() 1 0.0002828 0.0003655 0.0007661 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 2.558e-05 0.000631 0.0007404 0.02% DistributionMapping::LeastUsedCPUs() 1 1.431e-05 0.0006241 0.0007321 0.02% Castro::enforce_consistent_e() 1 8.186e-05 9.461e-05 0.0001198 0.00% FabArrayBase::getCPC() 41 7.742e-05 8.579e-05 9.39e-05 0.00% Castro::finalize_advance() 10 6.118e-05 6.297e-05 6.606e-05 0.00% Amr::writeSmallPlotFile() 1 2.597e-05 5.154e-05 6.081e-05 0.00% Castro::enforce_speed_limit() 62 3.127e-05 3.406e-05 3.982e-05 0.00% FabArrayBase::CPC::define() 2 2.283e-05 2.798e-05 3.588e-05 0.00% Amr::initSubcycle() 1 8.446e-06 1.178e-05 2.316e-05 0.00% Castro::create_source_corrector() 10 1.576e-05 1.734e-05 1.875e-05 0.00% Gravity::swapTimeLevels() 10 1.189e-05 1.334e-05 1.48e-05 0.00% Gravity::set_mass_offset() 10 7.841e-06 8.495e-06 9.762e-06 0.00% Castro::FluxRegFineAdd() 10 5.372e-06 6.864e-06 7.775e-06 0.00% Castro::retry_advance_ctu() 10 5.338e-06 6.284e-06 6.919e-06 0.00% DistributionMapping::Distribute() 1 9.81e-07 1.399e-06 2.485e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.02-14-gaa0dc39f50f7) finalized