MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.02-16-g3199edf61525) initialized Starting run at 06:31:03 UTC on 2022-03-01. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.02-16-g3199edf61 Microphysics git describe: 22.02-12-ga47a5a10 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015302589 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.361351829 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.324432314 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.306082336 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.305671567 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.306649163 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.334093502 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.297666676 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.291114918 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.292556219 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.292072641 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009737972 seconds Ending run at 06:31:07 UTC on 2022-03-01. Run time = 3.362688987 Run time without initialization = 3.125153175 Average number of zones advanced per microsecond: 0.839 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.362 ... 3.362 ... 3.363 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1411 2.1737 2.2117 65.77% Gravity::make_radial_gravity() 21 0.3462 0.3575 0.3729 11.09% Castro::initData() 1 0.03965 0.099 0.1578 4.69% Castro::estTimeStep() 21 0.02527 0.08553 0.1444 4.29% MultiFab::min() 10 0.03294 0.07762 0.1147 3.41% FabArray::ParallelCopy_finish() 41 0.03765 0.04646 0.08547 2.54% FabArray::setVal() 143 0.05274 0.0663 0.07188 2.14% Castro::reset_internal_energy() 63 0.04819 0.05037 0.05258 1.56% StateData::FillBoundary(geom) 41 0.03829 0.04152 0.04566 1.36% FabArray::ParallelCopy_nowait() 41 0.03424 0.03901 0.04095 1.22% Castro::normalize_species() 62 0.0323 0.03343 0.03521 1.05% FillPatchIterator::Initialize 41 0.02289 0.02884 0.03278 0.97% Gravity::interpolate_monopole_grav() 21 0.0278 0.0285 0.02965 0.88% Castro::construct_new_gravity_source() 10 0.02026 0.02356 0.02653 0.79% Castro::do_advance_ctu() 10 0.01427 0.01895 0.02271 0.68% Castro::expand_state() 10 0.01195 0.01803 0.02089 0.62% Castro::computeTemp() 63 0.01759 0.01881 0.01979 0.59% Castro::initialize_do_advance() 10 0.0105 0.01592 0.01801 0.54% VisMF::Write(FabArray) 2 0.01201 0.01295 0.01658 0.49% MultiFab::Saxpy() 20 0.01301 0.01455 0.016 0.48% Amr::writePlotFile() 2 0.008668 0.01229 0.01399 0.42% Castro::initialize_advance() 10 0.003862 0.01043 0.01322 0.39% Gravity::get_new_grav_vector() 11 0.009526 0.01058 0.01256 0.37% MultiFab::contains_nan() 20 0.01033 0.01126 0.01248 0.37% Castro::construct_old_gravity_source() 10 0.007073 0.0107 0.0116 0.35% FabArray::setDomainBndry() 41 0.006726 0.009237 0.01104 0.33% Amr::defBaseLevel() 1 0.006402 0.00861 0.01073 0.32% Gravity::get_old_grav_vector() 10 0.006688 0.008544 0.01025 0.30% StateData::define() 4 0.004245 0.00562 0.006962 0.21% Castro::enforce_min_density() 62 0.005706 0.006185 0.006844 0.20% Castro::construct_new_source() 50 0.005822 0.006463 0.00684 0.20% Castro::swap_state_time_levels() 10 0.002726 0.003891 0.005503 0.16% main() 1 0.003628 0.004072 0.004495 0.13% Amr::coarseTimeStep() 10 0.0004224 0.0006298 0.001253 0.04% Castro::finalize_do_advance() 10 0.0004674 0.00105 0.001214 0.04% Amr::InitAmr() 1 0.0003211 0.000423 0.0005367 0.02% Amr::timeStep() 10 0.0001638 0.0002234 0.0004865 0.01% DistributionMapping::LeastUsedCPUs() 1 7.563e-06 0.0001466 0.0002583 0.01% Castro::clean_state() 62 0.0001192 0.0001423 0.0001786 0.01% Castro::enforce_consistent_e() 1 7.853e-05 0.0001101 0.000145 0.00% StateDataPhysBCFunct::() 41 0.0001118 0.0001302 0.0001423 0.00% Castro::construct_old_source() 50 5.428e-05 7.775e-05 0.0001007 0.00% FabArrayBase::getCPC() 41 4.9e-05 6.234e-05 8.398e-05 0.00% FabArray::ParallelCopy() 41 5.871e-05 6.672e-05 7.829e-05 0.00% FillPatchSingleLevel 41 5.856e-05 6.534e-05 7.754e-05 0.00% Castro::subcycle_advance_ctu() 10 4.498e-05 5.904e-05 6.97e-05 0.00% Castro::apply_source_to_state() 20 3.936e-05 5.164e-05 6.653e-05 0.00% Castro::do_new_sources() 10 5.755e-05 6.193e-05 6.649e-05 0.00% Amr::writeSmallPlotFile() 1 3.221e-05 5.305e-05 6.641e-05 0.00% Castro::construct_old_gravity() 10 5.104e-05 5.743e-05 6.579e-05 0.00% Castro::do_old_sources() 10 5.188e-05 5.864e-05 6.445e-05 0.00% Amr::FinalizeInit() 1 4.008e-06 1.207e-05 6.198e-05 0.00% Castro::construct_new_gravity() 10 3.957e-05 4.914e-05 5.819e-05 0.00% Castro::finalize_advance() 10 5.089e-05 5.289e-05 5.649e-05 0.00% Castro::advance() 10 3.603e-05 4.344e-05 5.234e-05 0.00% FabArrayBase::CPC::define() 2 2.32e-05 3.089e-05 4.35e-05 0.00% Castro::enforce_speed_limit() 62 2.96e-05 3.497e-05 4.235e-05 0.00% Castro::check_for_nan() 20 2.397e-05 2.606e-05 2.881e-05 0.00% Gravity::swapTimeLevels() 10 1.044e-05 1.401e-05 2.221e-05 0.00% Castro::create_source_corrector() 10 1.298e-05 1.714e-05 1.971e-05 0.00% Amr::initSubcycle() 1 8.485e-06 1.31e-05 1.809e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.027e-06 1.261e-05 1.573e-05 0.00% Castro::post_init() 1 3.189e-06 5.483e-06 1.205e-05 0.00% Castro::post_regrid() 1 2.496e-06 4.096e-06 1.122e-05 0.00% Castro::post_timestep() 10 7.643e-06 9.194e-06 1.073e-05 0.00% Castro::retry_advance_ctu() 10 5.496e-06 6.713e-06 9.831e-06 0.00% Gravity::set_mass_offset() 10 6.87e-06 7.878e-06 9.181e-06 0.00% Castro::computeNewDt() 9 6.314e-06 7.283e-06 8.12e-06 0.00% Castro::FluxRegFineAdd() 10 4.733e-06 6.233e-06 7.161e-06 0.00% Amr::InitializeInit() 1 2.346e-06 3.29e-06 7.089e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.143e-06 5.014e-06 6.253e-06 0.00% Castro::computeInitialDt() 2 3.361e-06 4.204e-06 5.836e-06 0.00% Amr::init() 1 1.705e-06 2.286e-06 2.751e-06 0.00% Amr::initialInit() 1 1.213e-06 1.519e-06 1.827e-06 0.00% DistributionMapping::Distribute() 1 1.218e-06 1.372e-06 1.779e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.362 3.362 3.363 100.00% Amr::coarseTimeStep() 10 3.111 3.111 3.111 92.51% Amr::timeStep() 10 3.101 3.102 3.102 92.24% Castro::advance() 10 3.087 3.087 3.087 91.81% Castro::subcycle_advance_ctu() 10 3.012 3.018 3.035 90.27% Castro::do_advance_ctu() 10 3.012 3.018 3.035 90.26% Castro::construct_ctu_hydro_source() 10 2.141 2.174 2.212 65.77% Gravity::make_radial_gravity() 21 0.3462 0.3575 0.3729 11.09% Gravity::get_new_grav_vector() 11 0.2347 0.2369 0.2386 7.10% Amr::init() 1 0.2368 0.2369 0.2371 7.05% Amr::initialInit() 1 0.2209 0.2215 0.2224 6.61% Castro::construct_old_gravity() 10 0.1984 0.2058 0.2188 6.51% Gravity::get_old_grav_vector() 10 0.1975 0.205 0.2181 6.49% Castro::construct_new_gravity() 10 0.1993 0.2004 0.2012 5.98% FillPatchIterator::Initialize 41 0.152 0.1654 0.1907 5.67% Amr::InitializeInit() 1 0.0553 0.1195 0.1811 5.38% Amr::defBaseLevel() 1 0.0553 0.1195 0.1811 5.38% Amr::FinalizeInit() 1 0.0406 0.1021 0.1663 4.94% Castro::initData() 1 0.04317 0.1033 0.1631 4.85% Castro::initialize_do_advance() 10 0.147 0.1541 0.1621 4.82% FillPatchSingleLevel 41 0.1179 0.1274 0.1611 4.79% Castro::estTimeStep() 21 0.02527 0.08553 0.1444 4.29% Castro::computeInitialDt() 2 0.002479 0.06414 0.1284 3.82% Castro::expand_state() 10 0.1007 0.1099 0.1247 3.71% FabArray::ParallelCopy() 41 0.07689 0.08564 0.1199 3.57% MultiFab::min() 10 0.03294 0.07762 0.1147 3.41% Castro::clean_state() 62 0.1032 0.1078 0.1129 3.36% FabArray::ParallelCopy_finish() 41 0.03765 0.04646 0.08547 2.54% Castro::initialize_advance() 10 0.05099 0.06876 0.07446 2.21% Castro::computeTemp() 63 0.06582 0.06918 0.07216 2.15% FabArray::setVal() 143 0.05274 0.0663 0.07188 2.14% Castro::do_new_sources() 10 0.05649 0.06136 0.06697 1.99% Castro::reset_internal_energy() 63 0.04819 0.05037 0.05258 1.56% Castro::do_old_sources() 10 0.03912 0.04501 0.04642 1.38% StateDataPhysBCFunct::() 41 0.03841 0.04165 0.0458 1.36% StateData::FillBoundary(geom) 41 0.03829 0.04152 0.04566 1.36% FabArray::ParallelCopy_nowait() 41 0.03436 0.0391 0.04103 1.22% Castro::post_init() 1 0.03711 0.03752 0.0379 1.13% Castro::normalize_species() 62 0.0323 0.03343 0.03521 1.05% Castro::construct_new_source() 50 0.02608 0.03003 0.03337 0.99% Gravity::interpolate_monopole_grav() 21 0.0278 0.0285 0.02965 0.88% Castro::construct_new_gravity_source() 10 0.02026 0.02356 0.02653 0.79% Amr::writePlotFile() 2 0.02435 0.02524 0.026 0.77% VisMF::Write(FabArray) 2 0.01201 0.01295 0.01658 0.49% Castro::apply_source_to_state() 20 0.01306 0.0146 0.01606 0.48% MultiFab::Saxpy() 20 0.01301 0.01455 0.016 0.48% Castro::post_timestep() 10 0.01383 0.01423 0.01449 0.43% Castro::check_for_nan() 20 0.01035 0.01129 0.01251 0.37% MultiFab::contains_nan() 20 0.01033 0.01126 0.01248 0.37% Castro::construct_old_source() 50 0.007127 0.01077 0.01171 0.35% Castro::construct_old_gravity_source() 10 0.007073 0.0107 0.0116 0.35% FabArray::setDomainBndry() 41 0.006726 0.009237 0.01104 0.33% Castro::computeNewDt() 9 0.006764 0.007405 0.00795 0.24% AmrLevel::AmrLevel(dm) 1 0.004253 0.005632 0.006978 0.21% StateData::define() 4 0.004245 0.00562 0.006962 0.21% Castro::enforce_min_density() 62 0.005706 0.006185 0.006844 0.20% Castro::swap_state_time_levels() 10 0.002726 0.003891 0.005503 0.16% Castro::post_regrid() 1 0.001402 0.001772 0.002529 0.08% Castro::finalize_do_advance() 10 0.0004674 0.00105 0.001214 0.04% Amr::InitAmr() 1 0.0003314 0.0004361 0.0005546 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.379e-05 0.0001529 0.0002659 0.01% DistributionMapping::LeastUsedCPUs() 1 7.563e-06 0.0001466 0.0002583 0.01% Castro::enforce_consistent_e() 1 7.853e-05 0.0001101 0.000145 0.00% FabArrayBase::getCPC() 41 7.974e-05 9.323e-05 0.000123 0.00% Amr::writeSmallPlotFile() 1 3.221e-05 5.305e-05 6.641e-05 0.00% Castro::finalize_advance() 10 5.704e-05 5.912e-05 6.365e-05 0.00% FabArrayBase::CPC::define() 2 2.32e-05 3.089e-05 4.35e-05 0.00% Castro::enforce_speed_limit() 62 2.96e-05 3.497e-05 4.235e-05 0.00% Gravity::swapTimeLevels() 10 1.044e-05 1.401e-05 2.221e-05 0.00% Castro::create_source_corrector() 10 1.298e-05 1.714e-05 1.971e-05 0.00% Amr::initSubcycle() 1 8.485e-06 1.31e-05 1.809e-05 0.00% Castro::retry_advance_ctu() 10 5.496e-06 6.713e-06 9.831e-06 0.00% Gravity::set_mass_offset() 10 6.87e-06 7.878e-06 9.181e-06 0.00% Castro::FluxRegFineAdd() 10 4.733e-06 6.233e-06 7.161e-06 0.00% DistributionMapping::Distribute() 1 1.218e-06 1.372e-06 1.779e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.02-16-g3199edf61525) finalized