MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-4-g0ce37796a789) initialized Starting run at 06:31:18 UTC on 2022-03-03. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.03-4-g0ce37796a Microphysics git describe: 22.03 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012725049 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.337627796 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.323162288 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.319495943 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.315070046 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.315857936 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.340751617 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.298454046 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.294653412 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.290757899 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.291603049 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009434056 seconds Ending run at 06:31:22 UTC on 2022-03-03. Run time = 3.322901397 Run time without initialization = 3.140526568 Average number of zones advanced per microsecond: 0.835 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.322 ... 3.323 ... 3.323 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1210 2.1756 2.2159 66.68% Gravity::make_radial_gravity() 21 0.343 0.3548 0.3681 11.08% MultiFab::min() 10 0.02252 0.06715 0.125 3.76% Castro::initData() 1 0.03967 0.08155 0.122 3.67% Castro::estTimeStep() 21 0.02578 0.06385 0.1102 3.32% FabArray::setVal() 143 0.07094 0.07384 0.07841 2.36% FabArray::ParallelCopy_finish() 41 0.03352 0.03988 0.05485 1.65% Castro::reset_internal_energy() 63 0.04828 0.04996 0.05143 1.55% StateData::FillBoundary(geom) 41 0.0388 0.04149 0.04609 1.39% FabArray::ParallelCopy_nowait() 41 0.04025 0.04195 0.04397 1.32% FillPatchIterator::Initialize 41 0.02324 0.03126 0.03454 1.04% Castro::normalize_species() 62 0.03275 0.03337 0.03388 1.02% Gravity::interpolate_monopole_grav() 21 0.02762 0.02804 0.02853 0.86% Castro::construct_new_gravity_source() 10 0.02282 0.0246 0.02642 0.79% Castro::do_advance_ctu() 10 0.01779 0.02059 0.02416 0.73% Castro::expand_state() 10 0.0117 0.01852 0.02161 0.65% Castro::computeTemp() 63 0.0173 0.01873 0.01956 0.59% Castro::initialize_do_advance() 10 0.01053 0.01637 0.01855 0.56% MultiFab::Saxpy() 20 0.01465 0.01587 0.01663 0.50% Castro::initialize_advance() 10 0.0108 0.01252 0.01437 0.43% VisMF::Write(FabArray) 2 0.01124 0.01184 0.01408 0.42% Gravity::get_new_grav_vector() 11 0.01018 0.01135 0.01283 0.39% MultiFab::contains_nan() 20 0.01052 0.01146 0.01231 0.37% Castro::construct_old_gravity_source() 10 0.009169 0.01157 0.01224 0.37% FabArray::setDomainBndry() 41 0.00697 0.01041 0.01172 0.35% Amr::writePlotFile() 2 0.008309 0.01046 0.01121 0.34% Gravity::get_old_grav_vector() 10 0.008075 0.009334 0.01046 0.31% Amr::defBaseLevel() 1 0.006481 0.006936 0.007785 0.23% Castro::construct_new_source() 50 0.006313 0.006684 0.007416 0.22% Castro::enforce_min_density() 62 0.006554 0.006864 0.007143 0.21% StateData::define() 4 0.004287 0.004763 0.005577 0.17% Castro::swap_state_time_levels() 10 0.00298 0.003796 0.004192 0.13% main() 1 0.003512 0.003807 0.00408 0.12% Amr::coarseTimeStep() 10 0.0003552 0.0005803 0.0009455 0.03% Castro::finalize_do_advance() 10 0.0004694 0.0008071 0.0009161 0.03% Amr::timeStep() 10 0.0001583 0.0002369 0.0004772 0.01% Amr::InitAmr() 1 0.0002739 0.0003392 0.000438 0.01% DistributionMapping::LeastUsedCPUs() 1 7.592e-06 0.0001242 0.0002065 0.01% Castro::clean_state() 62 0.0001266 0.0001468 0.0001652 0.00% StateDataPhysBCFunct::() 41 0.0001183 0.0001382 0.000158 0.00% Castro::enforce_consistent_e() 1 8.234e-05 9.028e-05 0.00011 0.00% Amr::FinalizeInit() 1 4.029e-06 1.634e-05 9.865e-05 0.00% Castro::construct_old_source() 50 7.139e-05 8.193e-05 9.628e-05 0.00% FabArray::ParallelCopy() 41 6.135e-05 7.005e-05 8.438e-05 0.00% Castro::do_old_sources() 10 5.274e-05 6.816e-05 8.429e-05 0.00% FabArrayBase::getCPC() 41 5.289e-05 6.378e-05 8.014e-05 0.00% FillPatchSingleLevel 41 5.934e-05 6.674e-05 7.764e-05 0.00% Castro::subcycle_advance_ctu() 10 4.142e-05 6.355e-05 7.68e-05 0.00% Amr::writeSmallPlotFile() 1 2.718e-05 5.372e-05 7.471e-05 0.00% Castro::do_new_sources() 10 5.834e-05 6.625e-05 7.324e-05 0.00% Castro::construct_old_gravity() 10 5.334e-05 5.889e-05 6.864e-05 0.00% Castro::apply_source_to_state() 20 4.554e-05 5.279e-05 5.936e-05 0.00% Castro::construct_new_gravity() 10 3.638e-05 4.82e-05 5.835e-05 0.00% Castro::finalize_advance() 10 5.043e-05 5.33e-05 5.55e-05 0.00% Castro::advance() 10 3.698e-05 4.004e-05 4.52e-05 0.00% Castro::enforce_speed_limit() 62 2.989e-05 3.399e-05 3.898e-05 0.00% FabArrayBase::CPC::define() 2 2.413e-05 2.66e-05 3.627e-05 0.00% Castro::check_for_nan() 20 2.447e-05 2.693e-05 2.993e-05 0.00% Castro::computeNewDt() 9 7.308e-06 9.884e-06 2.351e-05 0.00% Castro::create_source_corrector() 10 1.564e-05 1.814e-05 1.969e-05 0.00% Gravity::swapTimeLevels() 10 1.219e-05 1.387e-05 1.503e-05 0.00% Amr::initSubcycle() 1 8.391e-06 1.083e-05 1.498e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.444e-06 9.2e-06 1.305e-05 0.00% Castro::post_timestep() 10 8.177e-06 9.342e-06 1.081e-05 0.00% Gravity::set_mass_offset() 10 7.099e-06 8.064e-06 9.195e-06 0.00% Castro::FluxRegFineAdd() 10 5.879e-06 6.853e-06 8.154e-06 0.00% Castro::retry_advance_ctu() 10 5.65e-06 6.395e-06 6.837e-06 0.00% Amr::InitializeInit() 1 2.068e-06 2.877e-06 6.016e-06 0.00% Castro::post_init() 1 3.251e-06 3.885e-06 5.862e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.734e-06 4.486e-06 5.054e-06 0.00% Castro::post_regrid() 1 1.861e-06 2.973e-06 4.62e-06 0.00% Castro::computeInitialDt() 2 3.132e-06 3.684e-06 4.165e-06 0.00% Amr::init() 1 1.813e-06 2.309e-06 3.054e-06 0.00% Amr::initialInit() 1 1.287e-06 1.467e-06 1.71e-06 0.00% DistributionMapping::Distribute() 1 1.058e-06 1.262e-06 1.646e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.322 3.323 3.323 100.00% Amr::coarseTimeStep() 10 3.127 3.127 3.127 94.11% Amr::timeStep() 10 3.118 3.118 3.119 93.85% Castro::advance() 10 3.103 3.103 3.103 93.39% Castro::subcycle_advance_ctu() 10 3.025 3.028 3.031 91.21% Castro::do_advance_ctu() 10 3.025 3.028 3.031 91.21% Castro::construct_ctu_hydro_source() 10 2.121 2.176 2.216 66.68% Gravity::make_radial_gravity() 21 0.343 0.3548 0.3681 11.08% Gravity::get_new_grav_vector() 11 0.2266 0.2278 0.2288 6.88% Castro::construct_old_gravity() 10 0.2046 0.2136 0.2255 6.79% Gravity::get_old_grav_vector() 10 0.2037 0.2128 0.2247 6.76% Castro::construct_new_gravity() 10 0.202 0.2024 0.2031 6.11% Amr::init() 1 0.1817 0.1819 0.1819 5.48% FillPatchIterator::Initialize 41 0.1608 0.1653 0.1722 5.18% Amr::initialInit() 1 0.169 0.1691 0.1693 5.09% Castro::initialize_do_advance() 10 0.138 0.1522 0.1592 4.79% Amr::InitializeInit() 1 0.05674 0.0999 0.1405 4.23% Amr::defBaseLevel() 1 0.05674 0.09989 0.1405 4.23% FillPatchSingleLevel 41 0.1179 0.1237 0.1347 4.05% Castro::initData() 1 0.04377 0.08556 0.1256 3.78% MultiFab::min() 10 0.02252 0.06715 0.125 3.76% Castro::expand_state() 10 0.1003 0.1072 0.1132 3.41% Amr::FinalizeInit() 1 0.0287 0.06918 0.1122 3.38% Castro::estTimeStep() 21 0.02578 0.06385 0.1102 3.32% Castro::clean_state() 62 0.1056 0.1081 0.11 3.31% FabArray::ParallelCopy() 41 0.07594 0.08198 0.09528 2.87% Castro::computeInitialDt() 2 0.001601 0.04212 0.08526 2.57% FabArray::setVal() 143 0.07094 0.07384 0.07841 2.36% Castro::initialize_advance() 10 0.0723 0.07521 0.07804 2.35% Castro::computeTemp() 63 0.06578 0.06869 0.07074 2.13% Castro::do_new_sources() 10 0.0597 0.06386 0.0684 2.06% FabArray::ParallelCopy_finish() 41 0.03352 0.03988 0.05485 1.65% Castro::reset_internal_energy() 63 0.04828 0.04996 0.05143 1.55% Castro::do_old_sources() 10 0.04576 0.04772 0.04858 1.46% StateDataPhysBCFunct::() 41 0.03892 0.04163 0.04622 1.39% StateData::FillBoundary(geom) 41 0.0388 0.04149 0.04609 1.39% FabArray::ParallelCopy_nowait() 41 0.04035 0.04204 0.04405 1.33% Castro::normalize_species() 62 0.03275 0.03337 0.03388 1.02% Castro::construct_new_source() 50 0.02913 0.03128 0.03383 1.02% Gravity::interpolate_monopole_grav() 21 0.02762 0.02804 0.02853 0.86% Castro::post_init() 1 0.02625 0.02644 0.02661 0.80% Castro::construct_new_gravity_source() 10 0.02282 0.0246 0.02642 0.79% Amr::writePlotFile() 2 0.02217 0.0223 0.02245 0.68% Castro::apply_source_to_state() 20 0.0147 0.01592 0.01669 0.50% MultiFab::Saxpy() 20 0.01465 0.01587 0.01663 0.50% Castro::post_timestep() 10 0.01405 0.01455 0.0151 0.45% VisMF::Write(FabArray) 2 0.01124 0.01184 0.01408 0.42% Castro::check_for_nan() 20 0.01055 0.01149 0.01233 0.37% Castro::construct_old_source() 50 0.009242 0.01165 0.01232 0.37% MultiFab::contains_nan() 20 0.01052 0.01146 0.01231 0.37% Castro::construct_old_gravity_source() 10 0.009169 0.01157 0.01224 0.37% FabArray::setDomainBndry() 41 0.00697 0.01041 0.01172 0.35% Castro::computeNewDt() 9 0.006831 0.007563 0.008241 0.25% Castro::enforce_min_density() 62 0.006554 0.006864 0.007143 0.21% AmrLevel::AmrLevel(dm) 1 0.004295 0.004772 0.00559 0.17% StateData::define() 4 0.004287 0.004763 0.005577 0.17% Castro::swap_state_time_levels() 10 0.00298 0.003796 0.004192 0.13% Castro::post_regrid() 1 0.001406 0.001515 0.001718 0.05% Castro::finalize_do_advance() 10 0.0004694 0.0008071 0.0009161 0.03% Amr::InitAmr() 1 0.0002833 0.00035 0.0004526 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.405e-05 0.0001299 0.0002127 0.01% DistributionMapping::LeastUsedCPUs() 1 7.592e-06 0.0001242 0.0002065 0.01% Castro::enforce_consistent_e() 1 8.234e-05 9.028e-05 0.00011 0.00% FabArrayBase::getCPC() 41 8.065e-05 9.037e-05 0.0001073 0.00% Amr::writeSmallPlotFile() 1 2.718e-05 5.372e-05 7.471e-05 0.00% Castro::finalize_advance() 10 5.786e-05 6.016e-05 6.284e-05 0.00% Castro::enforce_speed_limit() 62 2.989e-05 3.399e-05 3.898e-05 0.00% FabArrayBase::CPC::define() 2 2.413e-05 2.66e-05 3.627e-05 0.00% Castro::create_source_corrector() 10 1.564e-05 1.814e-05 1.969e-05 0.00% Gravity::swapTimeLevels() 10 1.219e-05 1.387e-05 1.503e-05 0.00% Amr::initSubcycle() 1 8.391e-06 1.083e-05 1.498e-05 0.00% Gravity::set_mass_offset() 10 7.099e-06 8.064e-06 9.195e-06 0.00% Castro::FluxRegFineAdd() 10 5.879e-06 6.853e-06 8.154e-06 0.00% Castro::retry_advance_ctu() 10 5.65e-06 6.395e-06 6.837e-06 0.00% DistributionMapping::Distribute() 1 1.058e-06 1.262e-06 1.646e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-4-g0ce37796a789) finalized