MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-7-g3fe001b36504) initialized Starting run at 06:31:20 UTC on 2022-03-04. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.03-7-g3fe001b36 Microphysics git describe: 22.03 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012671803 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.329392475 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.328088121 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.309509501 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.310402277 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.314219927 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.338536016 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.298509131 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.29388821 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.308334423 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.317608888 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010397307 seconds Ending run at 06:31:23 UTC on 2022-03-04. Run time = 3.352855186 Run time without initialization = 3.163036193 Average number of zones advanced per microsecond: 0.829 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.352 ... 3.353 ... 3.353 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1379 2.1861 2.2389 66.77% Gravity::make_radial_gravity() 21 0.3351 0.3487 0.3686 10.99% MultiFab::min() 10 0.02865 0.08716 0.1408 4.20% Castro::initData() 1 0.06114 0.08987 0.132 3.94% Castro::estTimeStep() 21 0.03154 0.06815 0.101 3.01% FabArray::ParallelCopy_finish() 41 0.03313 0.04365 0.08129 2.42% FabArray::setVal() 143 0.05972 0.06963 0.07593 2.26% Castro::reset_internal_energy() 63 0.04875 0.05015 0.05192 1.55% StateData::FillBoundary(geom) 41 0.03754 0.04198 0.04642 1.38% FabArray::ParallelCopy_nowait() 41 0.03395 0.04088 0.04371 1.30% Castro::normalize_species() 62 0.032 0.03302 0.03362 1.00% FillPatchIterator::Initialize 41 0.02254 0.03029 0.03313 0.99% Gravity::interpolate_monopole_grav() 21 0.02759 0.02796 0.02843 0.85% Castro::construct_new_gravity_source() 10 0.02014 0.02385 0.02645 0.79% Castro::do_advance_ctu() 10 0.01332 0.0189 0.02349 0.70% Castro::expand_state() 10 0.01142 0.01798 0.02113 0.63% Castro::computeTemp() 63 0.01798 0.01878 0.01943 0.58% Castro::initialize_do_advance() 10 0.009906 0.01626 0.01806 0.54% MultiFab::Saxpy() 20 0.01271 0.01443 0.01556 0.46% VisMF::Write(FabArray) 2 0.01108 0.012 0.01457 0.43% Castro::initialize_advance() 10 0.008312 0.01159 0.01371 0.41% Gravity::get_new_grav_vector() 11 0.009423 0.0112 0.01322 0.39% Amr::writePlotFile() 2 0.00874 0.0114 0.01261 0.38% MultiFab::contains_nan() 20 0.01046 0.0113 0.01222 0.36% FabArray::setDomainBndry() 41 0.007029 0.01028 0.01183 0.35% Castro::construct_old_gravity_source() 10 0.007113 0.01083 0.01157 0.35% Gravity::get_old_grav_vector() 10 0.006718 0.009102 0.01035 0.31% Amr::defBaseLevel() 1 0.006379 0.007653 0.009732 0.29% Castro::enforce_min_density() 62 0.006405 0.006723 0.007082 0.21% Castro::construct_new_source() 50 0.005897 0.006363 0.006581 0.20% StateData::define() 4 0.004242 0.005027 0.006322 0.19% main() 1 0.003728 0.004056 0.004446 0.13% Castro::swap_state_time_levels() 10 0.002468 0.003431 0.00373 0.11% Amr::coarseTimeStep() 10 0.0004212 0.0007175 0.001204 0.04% Castro::finalize_do_advance() 10 0.0004623 0.0008581 0.0009838 0.03% Amr::InitAmr() 1 0.0002636 0.0003413 0.0005836 0.02% Amr::timeStep() 10 0.0001596 0.0002229 0.000508 0.02% DistributionMapping::LeastUsedCPUs() 1 9.623e-06 0.0003076 0.0004054 0.01% Castro::clean_state() 62 0.0001218 0.0001461 0.00017 0.01% StateDataPhysBCFunct::() 41 0.0001208 0.00014 0.0001558 0.00% Castro::construct_old_source() 50 5.841e-05 7.958e-05 9.773e-05 0.00% Castro::enforce_consistent_e() 1 8.056e-05 8.917e-05 9.636e-05 0.00% FabArrayBase::getCPC() 41 5.222e-05 6.068e-05 7.91e-05 0.00% FabArray::ParallelCopy() 41 6.398e-05 7.149e-05 7.843e-05 0.00% Castro::do_old_sources() 10 5.574e-05 6.528e-05 7.581e-05 0.00% FillPatchSingleLevel 41 5.999e-05 6.678e-05 7.441e-05 0.00% Castro::do_new_sources() 10 5.745e-05 6.496e-05 7.277e-05 0.00% Amr::FinalizeInit() 1 3.811e-06 1.285e-05 7.074e-05 0.00% Amr::writeSmallPlotFile() 1 3.176e-05 5.677e-05 6.986e-05 0.00% Castro::subcycle_advance_ctu() 10 4.649e-05 6.122e-05 6.929e-05 0.00% Castro::construct_old_gravity() 10 5.209e-05 5.687e-05 6.541e-05 0.00% Castro::apply_source_to_state() 20 4.594e-05 5.114e-05 6.22e-05 0.00% Castro::construct_new_gravity() 10 3.774e-05 4.808e-05 5.704e-05 0.00% Castro::finalize_advance() 10 4.93e-05 5.353e-05 5.696e-05 0.00% Castro::advance() 10 3.612e-05 4.043e-05 4.563e-05 0.00% Castro::enforce_speed_limit() 62 2.942e-05 3.351e-05 4.032e-05 0.00% Castro::check_for_nan() 20 2.452e-05 2.752e-05 3.547e-05 0.00% FabArrayBase::CPC::define() 2 2.166e-05 2.607e-05 3.245e-05 0.00% Castro::create_source_corrector() 10 1.359e-05 1.675e-05 1.956e-05 0.00% Castro::post_init() 1 2.831e-06 5.698e-06 1.895e-05 0.00% Amr::initSubcycle() 1 8.674e-06 1.111e-05 1.67e-05 0.00% Gravity::swapTimeLevels() 10 1.048e-05 1.371e-05 1.651e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.233e-06 8.714e-06 1.324e-05 0.00% Amr::InitializeInit() 1 1.989e-06 3.494e-06 1.179e-05 0.00% Castro::post_timestep() 10 8.747e-06 9.794e-06 1.144e-05 0.00% Gravity::set_mass_offset() 10 7.204e-06 8.184e-06 9.154e-06 0.00% Castro::computeNewDt() 9 6.095e-06 7.84e-06 9.127e-06 0.00% Castro::FluxRegFineAdd() 10 5.133e-06 6.534e-06 7.793e-06 0.00% Castro::retry_advance_ctu() 10 5.716e-06 6.146e-06 7.702e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.886e-06 4.714e-06 6.265e-06 0.00% Castro::computeInitialDt() 2 2.784e-06 3.817e-06 5.326e-06 0.00% Castro::post_regrid() 1 1.919e-06 3.267e-06 4.844e-06 0.00% Amr::init() 1 1.968e-06 2.318e-06 2.706e-06 0.00% Amr::initialInit() 1 1.184e-06 1.519e-06 2.108e-06 0.00% DistributionMapping::Distribute() 1 1.072e-06 1.175e-06 1.39e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.352 3.353 3.353 100.00% Amr::coarseTimeStep() 10 3.148 3.148 3.148 93.90% Amr::timeStep() 10 3.139 3.139 3.139 93.63% Castro::advance() 10 3.124 3.124 3.124 93.19% Castro::subcycle_advance_ctu() 10 3.049 3.053 3.063 91.34% Castro::do_advance_ctu() 10 3.049 3.053 3.063 91.34% Castro::construct_ctu_hydro_source() 10 2.138 2.186 2.239 66.77% Gravity::make_radial_gravity() 21 0.3351 0.3487 0.3686 10.99% Castro::construct_old_gravity() 10 0.2024 0.2127 0.229 6.83% Gravity::get_old_grav_vector() 10 0.2015 0.212 0.2284 6.81% Gravity::get_new_grav_vector() 11 0.2207 0.2219 0.2232 6.66% Castro::construct_new_gravity() 10 0.1975 0.1987 0.1996 5.95% Amr::init() 1 0.189 0.1893 0.1894 5.65% FillPatchIterator::Initialize 41 0.156 0.1674 0.1829 5.45% Amr::initialInit() 1 0.1762 0.1764 0.1766 5.27% Castro::initialize_do_advance() 10 0.1434 0.1534 0.1598 4.77% FillPatchSingleLevel 41 0.1143 0.1269 0.1533 4.57% Amr::InitializeInit() 1 0.08195 0.1084 0.1501 4.48% Amr::defBaseLevel() 1 0.08194 0.1084 0.1501 4.48% MultiFab::min() 10 0.02865 0.08716 0.1408 4.20% Castro::initData() 1 0.06462 0.09351 0.1356 4.04% FabArray::ParallelCopy() 41 0.07314 0.08468 0.1154 3.44% Castro::expand_state() 10 0.09724 0.1085 0.114 3.40% Castro::clean_state() 62 0.1054 0.1079 0.1108 3.31% Castro::estTimeStep() 21 0.03154 0.06815 0.101 3.01% Amr::FinalizeInit() 1 0.02603 0.06798 0.09453 2.82% FabArray::ParallelCopy_finish() 41 0.03313 0.04365 0.08129 2.42% FabArray::setVal() 143 0.05972 0.06963 0.07593 2.26% Castro::initialize_advance() 10 0.06119 0.07146 0.07476 2.23% Castro::computeTemp() 63 0.06673 0.06893 0.07134 2.13% Castro::computeInitialDt() 2 0.0016 0.04326 0.06984 2.08% Castro::do_new_sources() 10 0.05622 0.06202 0.06774 2.02% Castro::reset_internal_energy() 63 0.04875 0.05015 0.05192 1.55% Castro::do_old_sources() 10 0.03905 0.04548 0.04703 1.40% StateDataPhysBCFunct::() 41 0.03767 0.04212 0.04657 1.39% StateData::FillBoundary(geom) 41 0.03754 0.04198 0.04642 1.38% FabArray::ParallelCopy_nowait() 41 0.03406 0.04096 0.04379 1.31% Castro::normalize_species() 62 0.032 0.03302 0.03362 1.00% Castro::construct_new_source() 50 0.02603 0.03022 0.03297 0.98% Gravity::interpolate_monopole_grav() 21 0.02759 0.02796 0.02843 0.85% Castro::construct_new_gravity_source() 10 0.02014 0.02385 0.02645 0.79% Castro::post_init() 1 0.02395 0.02417 0.02436 0.73% Amr::writePlotFile() 2 0.02323 0.0234 0.0237 0.71% Castro::apply_source_to_state() 20 0.01277 0.01448 0.0156 0.47% MultiFab::Saxpy() 20 0.01271 0.01443 0.01556 0.46% Castro::post_timestep() 10 0.01409 0.01446 0.01482 0.44% VisMF::Write(FabArray) 2 0.01108 0.012 0.01457 0.43% Castro::check_for_nan() 20 0.01049 0.01133 0.01225 0.37% MultiFab::contains_nan() 20 0.01046 0.0113 0.01222 0.36% FabArray::setDomainBndry() 41 0.007029 0.01028 0.01183 0.35% Castro::construct_old_source() 50 0.007171 0.01091 0.01166 0.35% Castro::construct_old_gravity_source() 10 0.007113 0.01083 0.01157 0.35% Castro::computeNewDt() 9 0.006863 0.007591 0.008278 0.25% Castro::enforce_min_density() 62 0.006405 0.006723 0.007082 0.21% AmrLevel::AmrLevel(dm) 1 0.004249 0.005035 0.006331 0.19% StateData::define() 4 0.004242 0.005027 0.006322 0.19% Castro::swap_state_time_levels() 10 0.002468 0.003431 0.00373 0.11% Castro::post_regrid() 1 0.00139 0.001456 0.001522 0.05% Castro::finalize_do_advance() 10 0.0004623 0.0008581 0.0009838 0.03% Amr::InitAmr() 1 0.0002729 0.0003524 0.0005993 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.499e-05 0.0003135 0.0004122 0.01% DistributionMapping::LeastUsedCPUs() 1 9.623e-06 0.0003076 0.0004054 0.01% FabArrayBase::getCPC() 41 7.52e-05 8.675e-05 0.0001071 0.00% Castro::enforce_consistent_e() 1 8.056e-05 8.917e-05 9.636e-05 0.00% Amr::writeSmallPlotFile() 1 3.176e-05 5.677e-05 6.986e-05 0.00% Castro::finalize_advance() 10 5.632e-05 6.007e-05 6.385e-05 0.00% Castro::enforce_speed_limit() 62 2.942e-05 3.351e-05 4.032e-05 0.00% FabArrayBase::CPC::define() 2 2.166e-05 2.607e-05 3.245e-05 0.00% Castro::create_source_corrector() 10 1.359e-05 1.675e-05 1.956e-05 0.00% Amr::initSubcycle() 1 8.674e-06 1.111e-05 1.67e-05 0.00% Gravity::swapTimeLevels() 10 1.048e-05 1.371e-05 1.651e-05 0.00% Gravity::set_mass_offset() 10 7.204e-06 8.184e-06 9.154e-06 0.00% Castro::FluxRegFineAdd() 10 5.133e-06 6.534e-06 7.793e-06 0.00% Castro::retry_advance_ctu() 10 5.716e-06 6.146e-06 7.702e-06 0.00% DistributionMapping::Distribute() 1 1.072e-06 1.175e-06 1.39e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-7-g3fe001b36504) finalized