MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-8-g6bbcbbb78299) initialized Starting run at 06:31:09 UTC on 2022-03-07. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.03-8-g6bbcbbb78 Microphysics git describe: 22.03-2-ge2419c42 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01483924 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.344768121 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.314925 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.355532822 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.307263888 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.308085948 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.33193023 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.29930945 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.291936757 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.292440215 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.290887295 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010033236 seconds Ending run at 06:31:12 UTC on 2022-03-07. Run time = 3.389067837 Run time without initialization = 3.150744229 Average number of zones advanced per microsecond: 0.832 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.389 ... 3.389 ... 3.389 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1221 2.1778 2.2365 65.99% Gravity::make_radial_gravity() 21 0.3473 0.3558 0.3701 10.92% Castro::initData() 1 0.03814 0.08983 0.1584 4.68% MultiFab::min() 10 0.0334 0.09528 0.155 4.57% Castro::estTimeStep() 21 0.02393 0.09592 0.1545 4.56% FabArray::ParallelCopy_finish() 41 0.03951 0.05548 0.09661 2.85% FabArray::setVal() 143 0.05379 0.06654 0.07408 2.19% Castro::reset_internal_energy() 63 0.04898 0.05061 0.05338 1.58% StateData::FillBoundary(geom) 41 0.03747 0.04084 0.04425 1.31% FabArray::ParallelCopy_nowait() 41 0.03313 0.03848 0.04064 1.20% Castro::normalize_species() 62 0.03193 0.03373 0.03531 1.04% FillPatchIterator::Initialize 41 0.02236 0.0285 0.03242 0.96% Gravity::interpolate_monopole_grav() 21 0.02786 0.02861 0.03123 0.92% Castro::construct_new_gravity_source() 10 0.02023 0.02289 0.02526 0.75% Castro::do_advance_ctu() 10 0.01441 0.01908 0.02181 0.64% Castro::computeTemp() 63 0.01797 0.01904 0.02028 0.60% Castro::expand_state() 10 0.01219 0.0177 0.01985 0.59% Castro::initialize_do_advance() 10 0.01001 0.01537 0.01749 0.52% VisMF::Write(FabArray) 2 0.01213 0.01304 0.01671 0.49% MultiFab::Saxpy() 20 0.01384 0.01477 0.01566 0.46% Amr::writePlotFile() 2 0.008387 0.01203 0.01345 0.40% Castro::initialize_advance() 10 0.003811 0.01018 0.01292 0.38% Gravity::get_new_grav_vector() 11 0.009481 0.01083 0.0126 0.37% Castro::construct_old_gravity_source() 10 0.006838 0.0106 0.01241 0.37% MultiFab::contains_nan() 20 0.01018 0.01107 0.01201 0.35% FabArray::setDomainBndry() 41 0.006565 0.008931 0.0104 0.31% Gravity::get_old_grav_vector() 10 0.006676 0.008929 0.01031 0.30% Amr::defBaseLevel() 1 0.006406 0.007581 0.009934 0.29% Castro::enforce_min_density() 62 0.006395 0.006753 0.007243 0.21% StateData::define() 4 0.004316 0.005209 0.006963 0.21% Castro::construct_new_source() 50 0.005684 0.006334 0.006692 0.20% Castro::swap_state_time_levels() 10 0.002494 0.003741 0.00519 0.15% main() 1 0.003389 0.003698 0.003971 0.12% Castro::finalize_do_advance() 10 0.0004795 0.0009059 0.001056 0.03% Amr::coarseTimeStep() 10 0.0004193 0.0005851 0.0008421 0.02% Amr::InitAmr() 1 0.0002911 0.0003621 0.0005203 0.02% Amr::timeStep() 10 0.0001602 0.0002228 0.0004907 0.01% DistributionMapping::LeastUsedCPUs() 1 8.04e-06 0.0002103 0.0002905 0.01% StateDataPhysBCFunct::() 41 0.0001162 0.0001336 0.0001921 0.01% Castro::clean_state() 62 0.0001246 0.0001424 0.0001645 0.00% Castro::enforce_consistent_e() 1 7.957e-05 9.543e-05 0.0001415 0.00% Castro::do_old_sources() 10 5.375e-05 6.099e-05 8.25e-05 0.00% Castro::construct_old_source() 50 5.992e-05 7.127e-05 7.974e-05 0.00% FabArray::ParallelCopy() 41 5.661e-05 6.907e-05 7.932e-05 0.00% FabArrayBase::getCPC() 41 5.156e-05 5.795e-05 7.711e-05 0.00% Castro::do_new_sources() 10 5.432e-05 6.147e-05 7.34e-05 0.00% Amr::writeSmallPlotFile() 1 3.134e-05 5.094e-05 6.993e-05 0.00% FillPatchSingleLevel 41 5.923e-05 6.39e-05 6.924e-05 0.00% Castro::subcycle_advance_ctu() 10 4.479e-05 5.58e-05 6.884e-05 0.00% Castro::apply_source_to_state() 20 4.25e-05 4.926e-05 6.268e-05 0.00% Castro::construct_old_gravity() 10 4.828e-05 5.507e-05 6.204e-05 0.00% Castro::construct_new_gravity() 10 3.784e-05 4.739e-05 6.005e-05 0.00% Amr::FinalizeInit() 1 4.304e-06 1.202e-05 6.001e-05 0.00% Castro::finalize_advance() 10 5.001e-05 5.229e-05 5.482e-05 0.00% Castro::advance() 10 3.856e-05 4.187e-05 4.804e-05 0.00% FabArrayBase::CPC::define() 2 2.168e-05 2.932e-05 4.689e-05 0.00% Castro::enforce_speed_limit() 62 2.991e-05 3.259e-05 3.569e-05 0.00% Castro::check_for_nan() 20 2.349e-05 2.543e-05 2.739e-05 0.00% Castro::create_source_corrector() 10 1.282e-05 1.757e-05 2.275e-05 0.00% Amr::initSubcycle() 1 8.178e-06 1.166e-05 1.829e-05 0.00% Gravity::swapTimeLevels() 10 1.003e-05 1.271e-05 1.721e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.146e-06 9.253e-06 1.357e-05 0.00% Castro::post_timestep() 10 7.289e-06 9.466e-06 1.077e-05 0.00% Castro::computeInitialDt() 2 3.615e-06 4.901e-06 9.502e-06 0.00% Castro::computeNewDt() 9 6.874e-06 7.572e-06 8.768e-06 0.00% Gravity::set_mass_offset() 10 7.233e-06 8.061e-06 8.655e-06 0.00% Castro::post_regrid() 1 1.791e-06 4.073e-06 8.5e-06 0.00% Castro::retry_advance_ctu() 10 5.485e-06 6.284e-06 7.281e-06 0.00% Castro::FluxRegFineAdd() 10 5.648e-06 6.353e-06 6.807e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.769e-06 5.519e-06 6.281e-06 0.00% Amr::InitializeInit() 1 1.996e-06 2.959e-06 6.049e-06 0.00% Castro::post_init() 1 3.23e-06 3.881e-06 4.771e-06 0.00% Amr::init() 1 1.999e-06 2.385e-06 3.031e-06 0.00% DistributionMapping::Distribute() 1 1.134e-06 1.393e-06 1.888e-06 0.00% Amr::initialInit() 1 1.146e-06 1.491e-06 1.817e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.389 3.389 3.389 100.00% Amr::coarseTimeStep() 10 3.137 3.137 3.137 92.55% Amr::timeStep() 10 3.127 3.128 3.128 92.29% Castro::advance() 10 3.112 3.113 3.113 91.85% Castro::subcycle_advance_ctu() 10 3.04 3.045 3.064 90.39% Castro::do_advance_ctu() 10 3.04 3.045 3.064 90.39% Castro::construct_ctu_hydro_source() 10 2.122 2.178 2.236 65.99% Gravity::make_radial_gravity() 21 0.3473 0.3558 0.3701 10.92% Amr::init() 1 0.2376 0.2378 0.2379 7.02% Gravity::get_new_grav_vector() 11 0.2322 0.233 0.234 6.90% Castro::construct_old_gravity() 10 0.2067 0.2124 0.2235 6.59% Amr::initialInit() 1 0.2224 0.2229 0.2233 6.59% Gravity::get_old_grav_vector() 10 0.206 0.2117 0.2229 6.58% FillPatchIterator::Initialize 41 0.1617 0.1726 0.1997 5.89% Castro::construct_new_gravity() 10 0.1959 0.1965 0.1976 5.83% Amr::InitializeInit() 1 0.05578 0.1089 0.1822 5.38% Amr::defBaseLevel() 1 0.05577 0.1089 0.1822 5.38% FillPatchSingleLevel 41 0.1247 0.1352 0.1708 5.04% Amr::FinalizeInit() 1 0.04097 0.1139 0.1667 4.92% Castro::initialize_do_advance() 10 0.1489 0.1529 0.1636 4.83% Castro::initData() 1 0.0419 0.09384 0.1635 4.83% MultiFab::min() 10 0.0334 0.09528 0.155 4.57% Castro::estTimeStep() 21 0.02393 0.09592 0.1545 4.56% FabArray::ParallelCopy() 41 0.0803 0.09412 0.1299 3.83% Castro::computeInitialDt() 2 0.002469 0.07596 0.1292 3.81% Castro::expand_state() 10 0.1029 0.109 0.1265 3.73% Castro::clean_state() 62 0.1063 0.1092 0.1147 3.38% FabArray::ParallelCopy_finish() 41 0.03951 0.05548 0.09661 2.85% FabArray::setVal() 143 0.05379 0.06654 0.07408 2.19% Castro::computeTemp() 63 0.06741 0.06965 0.07356 2.17% Castro::initialize_advance() 10 0.04878 0.0676 0.07323 2.16% Castro::do_new_sources() 10 0.05605 0.06061 0.06504 1.92% Castro::reset_internal_energy() 63 0.04898 0.05061 0.05338 1.58% Castro::do_old_sources() 10 0.04246 0.04677 0.05195 1.53% StateDataPhysBCFunct::() 41 0.03759 0.04097 0.04438 1.31% StateData::FillBoundary(geom) 41 0.03747 0.04084 0.04425 1.31% FabArray::ParallelCopy_nowait() 41 0.03322 0.03857 0.04072 1.20% Castro::post_init() 1 0.03699 0.03758 0.03788 1.12% Castro::normalize_species() 62 0.03193 0.03373 0.03531 1.04% Castro::construct_new_source() 50 0.02591 0.02923 0.03187 0.94% Gravity::interpolate_monopole_grav() 21 0.02786 0.02861 0.03123 0.92% Amr::writePlotFile() 2 0.02439 0.02508 0.02558 0.75% Castro::construct_new_gravity_source() 10 0.02023 0.02289 0.02526 0.75% VisMF::Write(FabArray) 2 0.01213 0.01304 0.01671 0.49% Castro::apply_source_to_state() 20 0.01388 0.01482 0.01572 0.46% MultiFab::Saxpy() 20 0.01384 0.01477 0.01566 0.46% Castro::post_timestep() 10 0.01426 0.01443 0.01457 0.43% Castro::construct_old_source() 50 0.006898 0.01067 0.01248 0.37% Castro::construct_old_gravity_source() 10 0.006838 0.0106 0.01241 0.37% Castro::check_for_nan() 20 0.01021 0.01109 0.01204 0.36% MultiFab::contains_nan() 20 0.01018 0.01107 0.01201 0.35% FabArray::setDomainBndry() 41 0.006565 0.008931 0.0104 0.31% Castro::computeNewDt() 9 0.006794 0.007259 0.007714 0.23% Castro::enforce_min_density() 62 0.006395 0.006753 0.007243 0.21% AmrLevel::AmrLevel(dm) 1 0.004324 0.005218 0.006976 0.21% StateData::define() 4 0.004316 0.005209 0.006963 0.21% Castro::swap_state_time_levels() 10 0.002494 0.003741 0.00519 0.15% Castro::post_regrid() 1 0.001383 0.001752 0.002522 0.07% Castro::finalize_do_advance() 10 0.0004795 0.0009059 0.001056 0.03% Amr::InitAmr() 1 0.000301 0.0003738 0.0005386 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.548e-05 0.0002172 0.0002979 0.01% DistributionMapping::LeastUsedCPUs() 1 8.04e-06 0.0002103 0.0002905 0.01% Castro::enforce_consistent_e() 1 7.957e-05 9.543e-05 0.0001415 0.00% FabArrayBase::getCPC() 41 7.499e-05 8.727e-05 0.000124 0.00% Amr::writeSmallPlotFile() 1 3.134e-05 5.094e-05 6.993e-05 0.00% Castro::finalize_advance() 10 5.627e-05 5.865e-05 6.155e-05 0.00% FabArrayBase::CPC::define() 2 2.168e-05 2.932e-05 4.689e-05 0.00% Castro::enforce_speed_limit() 62 2.991e-05 3.259e-05 3.569e-05 0.00% Castro::create_source_corrector() 10 1.282e-05 1.757e-05 2.275e-05 0.00% Amr::initSubcycle() 1 8.178e-06 1.166e-05 1.829e-05 0.00% Gravity::swapTimeLevels() 10 1.003e-05 1.271e-05 1.721e-05 0.00% Gravity::set_mass_offset() 10 7.233e-06 8.061e-06 8.655e-06 0.00% Castro::retry_advance_ctu() 10 5.485e-06 6.284e-06 7.281e-06 0.00% Castro::FluxRegFineAdd() 10 5.648e-06 6.353e-06 6.807e-06 0.00% DistributionMapping::Distribute() 1 1.134e-06 1.393e-06 1.888e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-8-g6bbcbbb78299) finalized