MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-8-g6bbcbbb78299) initialized Starting run at 06:31:08 UTC on 2022-03-08. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.03-8-g6bbcbbb78 Microphysics git describe: 22.03-2-ge2419c42 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012487997 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.332215014 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.342110544 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.336409684 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.312636143 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.313297283 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.337442053 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.296982338 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.292965906 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.29144689 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.292899906 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009963705 seconds Ending run at 06:31:11 UTC on 2022-03-08. Run time = 3.343328834 Run time without initialization = 3.161970399 Average number of zones advanced per microsecond: 0.829 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.343 ... 3.343 ... 3.343 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0908 2.1894 2.2343 66.83% Gravity::make_radial_gravity() 21 0.3297 0.339 0.3574 10.69% MultiFab::min() 10 0.04549 0.09363 0.1984 5.93% Castro::initData() 1 0.03969 0.07967 0.123 3.68% Castro::estTimeStep() 21 0.02144 0.06694 0.1079 3.23% FabArray::setVal() 143 0.06638 0.07252 0.07717 2.31% FabArray::ParallelCopy_finish() 41 0.03325 0.04108 0.06564 1.96% Castro::reset_internal_energy() 63 0.04822 0.05004 0.0514 1.54% StateData::FillBoundary(geom) 41 0.03683 0.04159 0.04421 1.32% FabArray::ParallelCopy_nowait() 41 0.03435 0.04091 0.04366 1.31% Castro::normalize_species() 62 0.03213 0.03302 0.03391 1.01% FillPatchIterator::Initialize 41 0.02332 0.0306 0.0336 1.00% Gravity::interpolate_monopole_grav() 21 0.02749 0.02795 0.02831 0.85% Castro::construct_new_gravity_source() 10 0.02107 0.0236 0.02603 0.78% Castro::do_advance_ctu() 10 0.01729 0.02056 0.02444 0.73% Castro::expand_state() 10 0.01163 0.01901 0.02139 0.64% Castro::computeTemp() 63 0.01857 0.0189 0.01924 0.58% Castro::initialize_do_advance() 10 0.0104 0.01613 0.01842 0.55% MultiFab::Saxpy() 20 0.01414 0.01477 0.01552 0.46% VisMF::Write(FabArray) 2 0.01208 0.01247 0.01451 0.43% Castro::initialize_advance() 10 0.01075 0.0124 0.01427 0.43% Gravity::get_new_grav_vector() 11 0.009496 0.01127 0.01328 0.40% MultiFab::contains_nan() 20 0.01055 0.01123 0.01184 0.35% Castro::construct_old_gravity_source() 10 0.006794 0.0108 0.01177 0.35% FabArray::setDomainBndry() 41 0.00659 0.01023 0.01156 0.35% Amr::writePlotFile() 2 0.008146 0.01031 0.0108 0.32% Gravity::get_old_grav_vector() 10 0.006609 0.009095 0.01015 0.30% Amr::defBaseLevel() 1 0.006451 0.006962 0.007448 0.22% Castro::enforce_min_density() 62 0.006471 0.006788 0.00717 0.21% Castro::construct_new_source() 50 0.00582 0.006331 0.006561 0.20% StateData::define() 4 0.004284 0.00461 0.004834 0.14% Castro::swap_state_time_levels() 10 0.002913 0.00377 0.004338 0.13% main() 1 0.003345 0.003738 0.00399 0.12% Amr::coarseTimeStep() 10 0.0003487 0.0007107 0.00143 0.04% Castro::finalize_do_advance() 10 0.0004162 0.001008 0.001231 0.04% Amr::timeStep() 10 0.0001693 0.0002289 0.0004373 0.01% Amr::InitAmr() 1 0.0002662 0.0003061 0.0004123 0.01% Castro::clean_state() 62 0.0001259 0.0001508 0.0001856 0.01% DistributionMapping::LeastUsedCPUs() 1 7.511e-06 0.0001223 0.0001698 0.01% StateDataPhysBCFunct::() 41 0.0001216 0.0001372 0.0001649 0.00% Castro::construct_old_source() 50 6.287e-05 7.955e-05 9.739e-05 0.00% Castro::enforce_consistent_e() 1 8.243e-05 8.821e-05 9.309e-05 0.00% FabArrayBase::getCPC() 41 5.17e-05 6.411e-05 8.54e-05 0.00% FabArray::ParallelCopy() 41 5.855e-05 7.207e-05 8.136e-05 0.00% Castro::do_old_sources() 10 5.867e-05 6.412e-05 7.987e-05 0.00% FillPatchSingleLevel 41 6.12e-05 6.905e-05 7.806e-05 0.00% Castro::subcycle_advance_ctu() 10 5.89e-05 6.631e-05 7.544e-05 0.00% Castro::construct_old_gravity() 10 5.48e-05 5.982e-05 7.322e-05 0.00% Castro::do_new_sources() 10 5.495e-05 6.363e-05 6.922e-05 0.00% Amr::FinalizeInit() 1 3.769e-06 1.221e-05 6.644e-05 0.00% Castro::apply_source_to_state() 20 4.24e-05 5.227e-05 6.535e-05 0.00% Castro::construct_new_gravity() 10 4.059e-05 4.942e-05 6.152e-05 0.00% Castro::finalize_advance() 10 4.662e-05 5.461e-05 6.063e-05 0.00% Amr::writeSmallPlotFile() 1 2.499e-05 5.293e-05 6.047e-05 0.00% Castro::advance() 10 3.65e-05 3.932e-05 4.551e-05 0.00% Castro::enforce_speed_limit() 62 2.943e-05 3.377e-05 3.76e-05 0.00% Castro::check_for_nan() 20 2.364e-05 2.752e-05 3.755e-05 0.00% FabArrayBase::CPC::define() 2 2.098e-05 2.551e-05 2.99e-05 0.00% Castro::create_source_corrector() 10 1.43e-05 1.794e-05 2.339e-05 0.00% Gravity::swapTimeLevels() 10 1.121e-05 1.327e-05 1.738e-05 0.00% Castro::post_timestep() 10 8.52e-06 9.899e-06 1.097e-05 0.00% Castro::post_init() 1 3.051e-06 5.605e-06 1.057e-05 0.00% Amr::initSubcycle() 1 8.608e-06 9.473e-06 9.976e-06 0.00% AmrLevel::AmrLevel(dm) 1 7.543e-06 8.285e-06 9.348e-06 0.00% Gravity::set_mass_offset() 10 7.257e-06 8.323e-06 9.343e-06 0.00% Castro::computeNewDt() 9 7.294e-06 7.703e-06 8.379e-06 0.00% Castro::FluxRegFineAdd() 10 5.376e-06 6.642e-06 7.442e-06 0.00% Castro::retry_advance_ctu() 10 5.208e-06 6.434e-06 7.161e-06 0.00% Amr::InitializeInit() 1 2.068e-06 2.787e-06 6.034e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.742e-06 4.499e-06 5.594e-06 0.00% Castro::computeInitialDt() 2 2.913e-06 3.476e-06 4.038e-06 0.00% Castro::post_regrid() 1 1.84e-06 2.702e-06 3.826e-06 0.00% Amr::init() 1 1.895e-06 2.33e-06 3.08e-06 0.00% Amr::initialInit() 1 1.381e-06 1.787e-06 2.385e-06 0.00% DistributionMapping::Distribute() 1 1e-06 1.083e-06 1.152e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.343 3.343 3.343 100.00% Amr::coarseTimeStep() 10 3.148 3.148 3.148 94.16% Amr::timeStep() 10 3.138 3.139 3.139 93.90% Castro::advance() 10 3.124 3.124 3.124 93.45% Castro::subcycle_advance_ctu() 10 3.047 3.049 3.052 91.29% Castro::do_advance_ctu() 10 3.047 3.049 3.052 91.29% Castro::construct_ctu_hydro_source() 10 2.091 2.189 2.234 66.83% Gravity::make_radial_gravity() 21 0.3297 0.339 0.3574 10.69% Gravity::get_new_grav_vector() 11 0.2195 0.2212 0.2224 6.65% Castro::construct_old_gravity() 10 0.1963 0.2034 0.2181 6.52% Gravity::get_old_grav_vector() 10 0.1954 0.2026 0.2175 6.50% Castro::construct_new_gravity() 10 0.1965 0.1979 0.1986 5.94% MultiFab::min() 10 0.04549 0.09363 0.1984 5.93% Amr::init() 1 0.1808 0.1809 0.181 5.41% FillPatchIterator::Initialize 41 0.1621 0.1648 0.1687 5.05% Amr::initialInit() 1 0.1681 0.1682 0.1683 5.03% Castro::initialize_do_advance() 10 0.1372 0.153 0.1593 4.77% Amr::InitializeInit() 1 0.05791 0.09772 0.1417 4.24% Amr::defBaseLevel() 1 0.0579 0.09771 0.1417 4.24% FillPatchSingleLevel 41 0.1181 0.124 0.1373 4.11% Castro::initData() 1 0.04334 0.08351 0.1266 3.79% Castro::expand_state() 10 0.09994 0.1082 0.1132 3.39% Amr::FinalizeInit() 1 0.02635 0.07044 0.1103 3.30% Castro::clean_state() 62 0.1051 0.108 0.1094 3.27% Castro::estTimeStep() 21 0.02144 0.06694 0.1079 3.23% FabArray::ParallelCopy() 41 0.07646 0.08215 0.1002 3.00% Castro::computeInitialDt() 2 0.001697 0.04566 0.08536 2.55% Castro::initialize_advance() 10 0.07219 0.07478 0.07733 2.31% FabArray::setVal() 143 0.06638 0.07252 0.07717 2.31% Castro::computeTemp() 63 0.06684 0.06894 0.07061 2.11% Castro::do_new_sources() 10 0.05827 0.06166 0.0659 1.97% FabArray::ParallelCopy_finish() 41 0.03325 0.04108 0.06564 1.96% Castro::reset_internal_energy() 63 0.04822 0.05004 0.0514 1.54% Castro::do_old_sources() 10 0.04053 0.04574 0.04697 1.40% StateDataPhysBCFunct::() 41 0.03699 0.04173 0.04436 1.33% StateData::FillBoundary(geom) 41 0.03683 0.04159 0.04421 1.32% FabArray::ParallelCopy_nowait() 41 0.03447 0.041 0.04375 1.31% Castro::normalize_species() 62 0.03213 0.03302 0.03391 1.01% Castro::construct_new_source() 50 0.02689 0.02993 0.03252 0.97% Gravity::interpolate_monopole_grav() 21 0.02749 0.02795 0.02831 0.85% Castro::construct_new_gravity_source() 10 0.02107 0.0236 0.02603 0.78% Castro::post_init() 1 0.02403 0.0242 0.02432 0.73% Amr::writePlotFile() 2 0.02266 0.02278 0.02291 0.69% Castro::apply_source_to_state() 20 0.01419 0.01482 0.01557 0.47% MultiFab::Saxpy() 20 0.01414 0.01477 0.01552 0.46% Castro::post_timestep() 10 0.01374 0.01442 0.01473 0.44% VisMF::Write(FabArray) 2 0.01208 0.01247 0.01451 0.43% Castro::check_for_nan() 20 0.01058 0.01126 0.01187 0.36% Castro::construct_old_source() 50 0.006856 0.01088 0.01187 0.35% MultiFab::contains_nan() 20 0.01055 0.01123 0.01184 0.35% Castro::construct_old_gravity_source() 10 0.006794 0.0108 0.01177 0.35% FabArray::setDomainBndry() 41 0.00659 0.01023 0.01156 0.35% Castro::computeNewDt() 9 0.006859 0.007507 0.008428 0.25% Castro::enforce_min_density() 62 0.006471 0.006788 0.00717 0.21% AmrLevel::AmrLevel(dm) 1 0.004292 0.004619 0.004842 0.14% StateData::define() 4 0.004284 0.00461 0.004834 0.14% Castro::swap_state_time_levels() 10 0.002913 0.00377 0.004338 0.13% Castro::post_regrid() 1 0.001423 0.001487 0.001547 0.05% Castro::finalize_do_advance() 10 0.0004162 0.001008 0.001231 0.04% Amr::InitAmr() 1 0.0002748 0.0003156 0.000422 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.291e-05 0.0001278 0.0001764 0.01% DistributionMapping::LeastUsedCPUs() 1 7.511e-06 0.0001223 0.0001698 0.01% FabArrayBase::getCPC() 41 7.553e-05 8.961e-05 0.0001153 0.00% Castro::enforce_consistent_e() 1 8.243e-05 8.821e-05 9.309e-05 0.00% Castro::finalize_advance() 10 5.406e-05 6.125e-05 6.723e-05 0.00% Amr::writeSmallPlotFile() 1 2.499e-05 5.293e-05 6.047e-05 0.00% Castro::enforce_speed_limit() 62 2.943e-05 3.377e-05 3.76e-05 0.00% FabArrayBase::CPC::define() 2 2.098e-05 2.551e-05 2.99e-05 0.00% Castro::create_source_corrector() 10 1.43e-05 1.794e-05 2.339e-05 0.00% Gravity::swapTimeLevels() 10 1.121e-05 1.327e-05 1.738e-05 0.00% Amr::initSubcycle() 1 8.608e-06 9.473e-06 9.976e-06 0.00% Gravity::set_mass_offset() 10 7.257e-06 8.323e-06 9.343e-06 0.00% Castro::FluxRegFineAdd() 10 5.376e-06 6.642e-06 7.442e-06 0.00% Castro::retry_advance_ctu() 10 5.208e-06 6.434e-06 7.161e-06 0.00% DistributionMapping::Distribute() 1 1e-06 1.083e-06 1.152e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-8-g6bbcbbb78299) finalized