MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-8-g6bbcbbb78299) initialized Starting run at 06:31:05 UTC on 2022-03-09. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.03-8-g6bbcbbb78 Microphysics git describe: 22.03-2-ge2419c42 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015607223 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.358641273 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.376468187 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.322910964 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.308734116 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.324809702 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.324038233 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.289952367 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.289745532 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.288486915 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.290196933 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009314488 seconds Ending run at 06:31:08 UTC on 2022-03-09. Run time = 3.422078213 Run time without initialization = 3.183367861 Average number of zones advanced per microsecond: 0.823 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.422 ... 3.422 ... 3.422 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0934 2.1694 2.2073 64.50% Gravity::make_radial_gravity() 21 0.3698 0.3784 0.3963 11.58% Castro::estTimeStep() 21 0.04631 0.1126 0.1641 4.80% MultiFab::min() 10 0.04368 0.08318 0.1628 4.76% Castro::initData() 1 0.03965 0.09011 0.1587 4.64% FabArray::ParallelCopy_finish() 41 0.03899 0.05761 0.08715 2.55% FabArray::setVal() 143 0.06085 0.06944 0.08031 2.35% Castro::reset_internal_energy() 63 0.0489 0.0507 0.05362 1.57% StateData::FillBoundary(geom) 41 0.03798 0.04218 0.04546 1.33% FabArray::ParallelCopy_nowait() 41 0.03381 0.03947 0.04155 1.21% Castro::normalize_species() 62 0.03233 0.03381 0.03565 1.04% FillPatchIterator::Initialize 41 0.02295 0.03097 0.03532 1.03% Castro::construct_new_gravity_source() 10 0.01958 0.02498 0.03359 0.98% Gravity::interpolate_monopole_grav() 21 0.02747 0.02819 0.02867 0.84% Castro::do_advance_ctu() 10 0.01673 0.01916 0.02156 0.63% Castro::computeTemp() 63 0.01835 0.01899 0.02022 0.59% Castro::initialize_do_advance() 10 0.01069 0.01732 0.01968 0.58% Castro::expand_state() 10 0.01199 0.01763 0.01965 0.57% VisMF::Write(FabArray) 2 0.01192 0.01292 0.01643 0.48% MultiFab::Saxpy() 20 0.01203 0.01371 0.01445 0.42% Amr::writePlotFile() 2 0.008708 0.0121 0.0139 0.41% Gravity::get_new_grav_vector() 11 0.00917 0.0108 0.013 0.38% Castro::initialize_advance() 10 0.007769 0.01057 0.01281 0.37% FabArray::setDomainBndry() 41 0.006592 0.009736 0.01121 0.33% MultiFab::contains_nan() 20 0.009839 0.01059 0.01119 0.33% Castro::construct_old_gravity_source() 10 0.007328 0.01023 0.011 0.32% Gravity::get_old_grav_vector() 10 0.006817 0.008951 0.01034 0.30% Amr::defBaseLevel() 1 0.006557 0.007953 0.01002 0.29% Castro::construct_new_source() 50 0.0055 0.006372 0.00891 0.26% Castro::enforce_min_density() 62 0.006254 0.006754 0.00747 0.22% StateData::define() 4 0.004336 0.005134 0.006364 0.19% Castro::swap_state_time_levels() 10 0.002714 0.003881 0.005149 0.15% Amr::coarseTimeStep() 10 0.0004073 0.001424 0.004439 0.13% main() 1 0.003372 0.003694 0.003853 0.11% Castro::finalize_do_advance() 10 0.0005188 0.0009694 0.001138 0.03% Amr::InitAmr() 1 0.0002783 0.0003531 0.0004577 0.01% Amr::timeStep() 10 0.0001723 0.0002323 0.0004436 0.01% DistributionMapping::LeastUsedCPUs() 1 9.718e-06 0.0001354 0.0002149 0.01% StateDataPhysBCFunct::() 41 0.0001166 0.0001332 0.0001525 0.00% Castro::clean_state() 62 0.0001259 0.000137 0.000148 0.00% Castro::enforce_consistent_e() 1 7.856e-05 9.897e-05 0.0001407 0.00% Castro::do_new_sources() 10 4.76e-05 6.106e-05 8.537e-05 0.00% Castro::construct_old_source() 50 4.242e-05 6.686e-05 7.999e-05 0.00% Castro::finalize_advance() 10 4.998e-05 5.936e-05 7.425e-05 0.00% FabArray::ParallelCopy() 41 6.266e-05 6.919e-05 7.422e-05 0.00% FillPatchSingleLevel 41 5.899e-05 6.517e-05 7.1e-05 0.00% FabArrayBase::getCPC() 41 4.94e-05 5.641e-05 6.842e-05 0.00% Amr::writeSmallPlotFile() 1 2.55e-05 5.147e-05 6.698e-05 0.00% Castro::do_old_sources() 10 4.053e-05 5.635e-05 6.461e-05 0.00% Castro::subcycle_advance_ctu() 10 4.109e-05 4.811e-05 6.454e-05 0.00% Castro::construct_old_gravity() 10 4.395e-05 5.225e-05 6.417e-05 0.00% Amr::FinalizeInit() 1 4.279e-06 1.231e-05 6.332e-05 0.00% Castro::apply_source_to_state() 20 3.599e-05 4.739e-05 5.314e-05 0.00% Castro::advance() 10 3.216e-05 3.941e-05 5.123e-05 0.00% Castro::construct_new_gravity() 10 3.807e-05 4.382e-05 5.076e-05 0.00% Castro::enforce_speed_limit() 62 2.903e-05 3.215e-05 3.696e-05 0.00% FabArrayBase::CPC::define() 2 2.558e-05 2.855e-05 3.293e-05 0.00% Castro::check_for_nan() 20 2.199e-05 2.394e-05 2.573e-05 0.00% Castro::computeNewDt() 9 7.627e-06 1.025e-05 2.388e-05 0.00% Gravity::swapTimeLevels() 10 8.052e-06 1.418e-05 2.329e-05 0.00% Castro::post_timestep() 10 8.391e-06 1.407e-05 2.217e-05 0.00% Castro::create_source_corrector() 10 1.26e-05 1.624e-05 2.021e-05 0.00% Amr::initSubcycle() 1 8.218e-06 1.106e-05 1.567e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.15e-06 1.068e-05 1.527e-05 0.00% Gravity::set_mass_offset() 10 7.347e-06 8.443e-06 1.195e-05 0.00% Castro::FluxRegFineAdd() 10 5.355e-06 7.569e-06 1.089e-05 0.00% Castro::retry_advance_ctu() 10 5.524e-06 6.677e-06 1.074e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.828e-06 4.995e-06 6.722e-06 0.00% Amr::InitializeInit() 1 2.06e-06 3.05e-06 6.637e-06 0.00% Castro::post_init() 1 3.163e-06 4.529e-06 6.306e-06 0.00% Castro::computeInitialDt() 2 3.884e-06 4.527e-06 5.179e-06 0.00% Castro::post_regrid() 1 2.59e-06 3.541e-06 4.245e-06 0.00% Amr::init() 1 2.022e-06 2.396e-06 2.791e-06 0.00% Amr::initialInit() 1 1.176e-06 1.547e-06 2.148e-06 0.00% DistributionMapping::Distribute() 1 1.095e-06 1.272e-06 1.476e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.422 3.422 3.422 100.00% Amr::coarseTimeStep() 10 3.17 3.17 3.17 92.64% Amr::timeStep() 10 3.156 3.157 3.16 92.35% Castro::advance() 10 3.142 3.142 3.142 91.82% Castro::subcycle_advance_ctu() 10 3.061 3.07 3.076 89.88% Castro::do_advance_ctu() 10 3.061 3.07 3.076 89.88% Castro::construct_ctu_hydro_source() 10 2.093 2.169 2.207 64.50% Gravity::make_radial_gravity() 21 0.3698 0.3784 0.3963 11.58% Gravity::get_new_grav_vector() 11 0.2401 0.2413 0.2419 7.07% Castro::construct_old_gravity() 10 0.2171 0.2243 0.2386 6.97% Amr::init() 1 0.238 0.2382 0.2383 6.96% Gravity::get_old_grav_vector() 10 0.2163 0.2234 0.2379 6.95% Amr::initialInit() 1 0.2218 0.2226 0.2233 6.53% Castro::construct_new_gravity() 10 0.2034 0.2045 0.2059 6.02% FillPatchIterator::Initialize 41 0.1667 0.1803 0.1888 5.52% Amr::InitializeInit() 1 0.056 0.1092 0.1819 5.32% Amr::defBaseLevel() 1 0.05599 0.1092 0.1819 5.32% Castro::initialize_do_advance() 10 0.1561 0.1677 0.1772 5.18% Amr::FinalizeInit() 1 0.04127 0.1133 0.1664 4.86% Castro::estTimeStep() 21 0.04631 0.1126 0.1641 4.80% Castro::initData() 1 0.04334 0.0942 0.1637 4.78% MultiFab::min() 10 0.04368 0.08318 0.1628 4.76% FillPatchSingleLevel 41 0.1214 0.1396 0.1593 4.65% Castro::expand_state() 10 0.1102 0.1214 0.1291 3.77% Castro::computeInitialDt() 2 0.002449 0.07528 0.1285 3.75% FabArray::ParallelCopy() 41 0.07927 0.09723 0.1211 3.54% Castro::clean_state() 62 0.1054 0.1093 0.1161 3.39% FabArray::ParallelCopy_finish() 41 0.03899 0.05761 0.08715 2.55% Castro::initialize_advance() 10 0.06606 0.07214 0.08075 2.36% FabArray::setVal() 143 0.06085 0.06944 0.08031 2.35% Castro::do_new_sources() 10 0.05449 0.06263 0.07532 2.20% Castro::computeTemp() 63 0.06752 0.06969 0.07384 2.16% Castro::reset_internal_energy() 63 0.0489 0.0507 0.05362 1.57% Castro::do_old_sources() 10 0.03809 0.04382 0.04692 1.37% StateDataPhysBCFunct::() 41 0.03812 0.04232 0.04559 1.33% StateData::FillBoundary(geom) 41 0.03798 0.04218 0.04546 1.33% FabArray::ParallelCopy_nowait() 41 0.0339 0.03955 0.04163 1.22% Castro::construct_new_source() 50 0.02508 0.03135 0.03986 1.16% Castro::post_init() 1 0.03714 0.0376 0.0378 1.10% Castro::normalize_species() 62 0.03233 0.03381 0.03565 1.04% Castro::construct_new_gravity_source() 10 0.01958 0.02498 0.03359 0.98% Gravity::interpolate_monopole_grav() 21 0.02747 0.02819 0.02867 0.84% Amr::writePlotFile() 2 0.02414 0.02502 0.02582 0.75% Castro::post_timestep() 10 0.01397 0.01494 0.0179 0.52% VisMF::Write(FabArray) 2 0.01192 0.01292 0.01643 0.48% Castro::apply_source_to_state() 20 0.01207 0.01376 0.01451 0.42% MultiFab::Saxpy() 20 0.01203 0.01371 0.01445 0.42% Castro::computeNewDt() 9 0.007354 0.01016 0.01194 0.35% FabArray::setDomainBndry() 41 0.006592 0.009736 0.01121 0.33% Castro::check_for_nan() 20 0.009864 0.01061 0.01121 0.33% MultiFab::contains_nan() 20 0.009839 0.01059 0.01119 0.33% Castro::construct_old_source() 50 0.00737 0.0103 0.01107 0.32% Castro::construct_old_gravity_source() 10 0.007328 0.01023 0.011 0.32% Castro::enforce_min_density() 62 0.006254 0.006754 0.00747 0.22% AmrLevel::AmrLevel(dm) 1 0.004345 0.005145 0.006377 0.19% StateData::define() 4 0.004336 0.005134 0.006364 0.19% Castro::swap_state_time_levels() 10 0.002714 0.003881 0.005149 0.15% Castro::post_regrid() 1 0.001425 0.001783 0.002531 0.07% Castro::finalize_do_advance() 10 0.0005188 0.0009694 0.001138 0.03% Amr::InitAmr() 1 0.0002874 0.0003641 0.0004734 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.6e-05 0.0001416 0.000223 0.01% DistributionMapping::LeastUsedCPUs() 1 9.718e-06 0.0001354 0.0002149 0.01% Castro::enforce_consistent_e() 1 7.856e-05 9.897e-05 0.0001407 0.00% FabArrayBase::getCPC() 41 7.559e-05 8.496e-05 9.487e-05 0.00% Castro::finalize_advance() 10 5.635e-05 6.693e-05 8.514e-05 0.00% Amr::writeSmallPlotFile() 1 2.55e-05 5.147e-05 6.698e-05 0.00% Castro::enforce_speed_limit() 62 2.903e-05 3.215e-05 3.696e-05 0.00% FabArrayBase::CPC::define() 2 2.558e-05 2.855e-05 3.293e-05 0.00% Gravity::swapTimeLevels() 10 8.052e-06 1.418e-05 2.329e-05 0.00% Castro::create_source_corrector() 10 1.26e-05 1.624e-05 2.021e-05 0.00% Amr::initSubcycle() 1 8.218e-06 1.106e-05 1.567e-05 0.00% Gravity::set_mass_offset() 10 7.347e-06 8.443e-06 1.195e-05 0.00% Castro::FluxRegFineAdd() 10 5.355e-06 7.569e-06 1.089e-05 0.00% Castro::retry_advance_ctu() 10 5.524e-06 6.677e-06 1.074e-05 0.00% DistributionMapping::Distribute() 1 1.095e-06 1.272e-06 1.476e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-8-g6bbcbbb78299) finalized