MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-11-gc5dce693676e) initialized Starting run at 19:37:35 UTC on 2022-03-11. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.03-11-gc5dce6936 Microphysics git describe: 22.03-177-g8639adee reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012540891 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.339448733 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.319870633 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.33676861 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.316749734 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.315319895 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.342471519 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.299667216 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.29295205 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.291351764 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.292412801 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009249773 seconds Ending run at 19:37:39 UTC on 2022-03-11. Run time = 3.33150119 Run time without initialization = 3.160009937 Average number of zones advanced per microsecond: 0.830 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.331 ... 3.331 ... 3.332 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1488 2.1863 2.2307 66.96% Gravity::make_radial_gravity() 21 0.3325 0.3444 0.3559 10.68% MultiFab::min() 10 0.03264 0.08213 0.1227 3.68% Castro::initData() 1 0.03831 0.07754 0.1135 3.41% Castro::estTimeStep() 21 0.02198 0.05779 0.1014 3.04% FabArray::setVal() 143 0.06826 0.07398 0.07843 2.35% Castro::reset_internal_energy() 63 0.04841 0.0499 0.05168 1.55% FabArray::ParallelCopy_finish() 41 0.03141 0.03949 0.04741 1.42% StateData::FillBoundary(geom) 41 0.03916 0.04185 0.0445 1.34% FabArray::ParallelCopy_nowait() 41 0.03972 0.04223 0.04438 1.33% Castro::normalize_species() 62 0.03266 0.03331 0.03413 1.02% FillPatchIterator::Initialize 41 0.02456 0.03148 0.03408 1.02% Gravity::interpolate_monopole_grav() 21 0.02747 0.02798 0.0284 0.85% Castro::construct_new_gravity_source() 10 0.02238 0.02469 0.02662 0.80% Castro::do_advance_ctu() 10 0.01737 0.02108 0.02464 0.74% Castro::expand_state() 10 0.01516 0.01987 0.02296 0.69% Castro::initialize_do_advance() 10 0.01595 0.01748 0.01913 0.57% Castro::computeTemp() 63 0.01831 0.01876 0.01907 0.57% MultiFab::Saxpy() 20 0.01486 0.01579 0.01672 0.50% Castro::initialize_advance() 10 0.01072 0.01255 0.01447 0.43% VisMF::Write(FabArray) 2 0.01136 0.01178 0.01382 0.41% Gravity::get_new_grav_vector() 11 0.01019 0.01149 0.01332 0.40% MultiFab::contains_nan() 20 0.01062 0.01156 0.01262 0.38% Castro::construct_old_gravity_source() 10 0.01091 0.01157 0.01205 0.36% FabArray::setDomainBndry() 41 0.007774 0.01067 0.01196 0.36% Amr::writePlotFile() 2 0.008211 0.01023 0.01068 0.32% Gravity::get_old_grav_vector() 10 0.008485 0.009326 0.0106 0.32% Amr::defBaseLevel() 1 0.006553 0.006881 0.008599 0.26% Castro::enforce_min_density() 62 0.006575 0.006978 0.007297 0.22% Castro::construct_new_source() 50 0.006358 0.006644 0.006875 0.21% StateData::define() 4 0.00431 0.004415 0.004908 0.15% main() 1 0.003395 0.003742 0.004005 0.12% Castro::swap_state_time_levels() 10 0.002955 0.003777 0.003905 0.12% Castro::finalize_do_advance() 10 0.0008374 0.001065 0.001207 0.04% Amr::coarseTimeStep() 10 0.0003015 0.0005294 0.0007806 0.02% Amr::timeStep() 10 0.0001558 0.0002197 0.0004557 0.01% Amr::InitAmr() 1 0.0002574 0.0002856 0.0004164 0.01% DistributionMapping::LeastUsedCPUs() 1 6.678e-06 0.0001535 0.0001839 0.01% StateDataPhysBCFunct::() 41 0.000122 0.0001389 0.0001696 0.01% Castro::clean_state() 62 0.0001334 0.0001504 0.0001693 0.01% Amr::FinalizeInit() 1 3.468e-06 1.897e-05 0.0001185 0.00% Castro::construct_old_source() 50 6.206e-05 8.237e-05 0.0001034 0.00% Castro::enforce_consistent_e() 1 7.567e-05 8.764e-05 9.974e-05 0.00% FillPatchSingleLevel 41 6.494e-05 7.14e-05 8.185e-05 0.00% Castro::do_new_sources() 10 5.808e-05 6.688e-05 7.905e-05 0.00% Amr::writeSmallPlotFile() 1 2.481e-05 5.73e-05 7.526e-05 0.00% FabArray::ParallelCopy() 41 6.565e-05 6.843e-05 7.481e-05 0.00% Castro::subcycle_advance_ctu() 10 3.981e-05 5.944e-05 7.096e-05 0.00% FabArrayBase::getCPC() 41 4.486e-05 5.71e-05 6.781e-05 0.00% Castro::do_old_sources() 10 5.735e-05 6.402e-05 6.765e-05 0.00% Castro::advance() 10 3.721e-05 4.399e-05 6.27e-05 0.00% Castro::construct_old_gravity() 10 5.132e-05 5.647e-05 6.245e-05 0.00% Castro::finalize_advance() 10 4.729e-05 5.343e-05 5.843e-05 0.00% Castro::apply_source_to_state() 20 3.966e-05 5.089e-05 5.798e-05 0.00% Castro::construct_new_gravity() 10 3.491e-05 4.391e-05 5.47e-05 0.00% Castro::enforce_speed_limit() 62 2.697e-05 3.467e-05 4.081e-05 0.00% FabArrayBase::CPC::define() 2 2.674e-05 3.01e-05 3.546e-05 0.00% Castro::check_for_nan() 20 2.315e-05 2.73e-05 3.207e-05 0.00% Castro::computeNewDt() 9 7.133e-06 1.017e-05 2.526e-05 0.00% Castro::create_source_corrector() 10 1.738e-05 1.887e-05 2.066e-05 0.00% Gravity::swapTimeLevels() 10 1.174e-05 1.502e-05 1.798e-05 0.00% Gravity::set_mass_offset() 10 7.066e-06 8.911e-06 1.507e-05 0.00% Castro::post_timestep() 10 7.625e-06 9.162e-06 1.05e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.002e-06 8.794e-06 1.047e-05 0.00% Amr::initSubcycle() 1 8.118e-06 8.554e-06 9.946e-06 0.00% Castro::FluxRegFineAdd() 10 5.681e-06 6.639e-06 7.568e-06 0.00% Castro::retry_advance_ctu() 10 5.203e-06 5.849e-06 6.932e-06 0.00% Amr::InitializeInit() 1 1.837e-06 2.695e-06 6.653e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.508e-06 3.943e-06 5.263e-06 0.00% Castro::post_init() 1 2.879e-06 3.918e-06 5.12e-06 0.00% Castro::post_regrid() 1 1.694e-06 3.327e-06 4.736e-06 0.00% Castro::computeInitialDt() 2 3.316e-06 3.875e-06 4.53e-06 0.00% Amr::init() 1 2.048e-06 2.319e-06 3.171e-06 0.00% Amr::initialInit() 1 1.251e-06 1.592e-06 2.054e-06 0.00% DistributionMapping::Distribute() 1 1.005e-06 1.139e-06 1.371e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.331 3.331 3.332 100.00% Amr::coarseTimeStep() 10 3.147 3.147 3.147 94.46% Amr::timeStep() 10 3.138 3.138 3.138 94.20% Castro::advance() 10 3.123 3.123 3.124 93.76% Castro::subcycle_advance_ctu() 10 3.046 3.048 3.051 91.58% Castro::do_advance_ctu() 10 3.046 3.048 3.051 91.58% Castro::construct_ctu_hydro_source() 10 2.149 2.186 2.231 66.96% Gravity::make_radial_gravity() 21 0.3325 0.3444 0.3559 10.68% Gravity::get_new_grav_vector() 11 0.2215 0.2236 0.2251 6.76% Castro::construct_old_gravity() 10 0.1989 0.2074 0.217 6.51% Gravity::get_old_grav_vector() 10 0.1981 0.2066 0.2163 6.49% Castro::construct_new_gravity() 10 0.1987 0.2001 0.2011 6.04% FillPatchIterator::Initialize 41 0.159 0.1661 0.1731 5.20% Amr::init() 1 0.1709 0.171 0.1711 5.14% Castro::initialize_do_advance() 10 0.1475 0.1564 0.163 4.89% Amr::initialInit() 1 0.1582 0.1584 0.1585 4.76% Amr::InitializeInit() 1 0.05618 0.09568 0.1316 3.95% Amr::defBaseLevel() 1 0.05618 0.09568 0.1316 3.95% FillPatchSingleLevel 41 0.1163 0.1239 0.1298 3.90% MultiFab::min() 10 0.03264 0.08213 0.1227 3.68% Castro::initData() 1 0.04221 0.08148 0.1176 3.53% Castro::expand_state() 10 0.1011 0.1098 0.1169 3.51% Castro::clean_state() 62 0.1054 0.1082 0.1111 3.34% Amr::FinalizeInit() 1 0.02686 0.06269 0.1023 3.07% Castro::estTimeStep() 21 0.02198 0.05779 0.1014 3.04% FabArray::ParallelCopy() 41 0.07344 0.08188 0.08781 2.64% FabArray::setVal() 143 0.06826 0.07398 0.07843 2.35% Castro::initialize_advance() 10 0.07224 0.07496 0.07747 2.33% Castro::computeInitialDt() 2 0.001669 0.03757 0.0771 2.31% Castro::computeTemp() 63 0.0669 0.06865 0.0706 2.12% Castro::do_new_sources() 10 0.05979 0.06397 0.06794 2.04% Castro::reset_internal_energy() 63 0.04841 0.0499 0.05168 1.55% Castro::do_old_sources() 10 0.04673 0.04733 0.04774 1.43% FabArray::ParallelCopy_finish() 41 0.03141 0.03949 0.04741 1.42% StateDataPhysBCFunct::() 41 0.03932 0.04199 0.04462 1.34% StateData::FillBoundary(geom) 41 0.03916 0.04185 0.0445 1.34% FabArray::ParallelCopy_nowait() 41 0.0398 0.04232 0.04446 1.33% Castro::normalize_species() 62 0.03266 0.03331 0.03413 1.02% Castro::construct_new_source() 50 0.02887 0.03133 0.03349 1.01% Gravity::interpolate_monopole_grav() 21 0.02747 0.02798 0.0284 0.85% Castro::construct_new_gravity_source() 10 0.02238 0.02469 0.02662 0.80% Castro::post_init() 1 0.02443 0.02455 0.02466 0.74% Amr::writePlotFile() 2 0.02193 0.02201 0.02216 0.67% Castro::apply_source_to_state() 20 0.0149 0.01584 0.01678 0.50% MultiFab::Saxpy() 20 0.01486 0.01579 0.01672 0.50% Castro::post_timestep() 10 0.01421 0.01447 0.0147 0.44% VisMF::Write(FabArray) 2 0.01136 0.01178 0.01382 0.41% Castro::check_for_nan() 20 0.01065 0.01159 0.01265 0.38% MultiFab::contains_nan() 20 0.01062 0.01156 0.01262 0.38% Castro::construct_old_source() 50 0.01098 0.01165 0.01213 0.36% Castro::construct_old_gravity_source() 10 0.01091 0.01157 0.01205 0.36% FabArray::setDomainBndry() 41 0.007774 0.01067 0.01196 0.36% Castro::computeNewDt() 9 0.006763 0.007273 0.007696 0.23% Castro::enforce_min_density() 62 0.006575 0.006978 0.007297 0.22% AmrLevel::AmrLevel(dm) 1 0.004319 0.004424 0.004918 0.15% StateData::define() 4 0.00431 0.004415 0.004908 0.15% Castro::swap_state_time_levels() 10 0.002955 0.003777 0.003905 0.12% Castro::post_regrid() 1 0.001422 0.001449 0.001506 0.05% Castro::finalize_do_advance() 10 0.0008374 0.001065 0.001207 0.04% Amr::InitAmr() 1 0.0002661 0.0002941 0.0004264 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.175e-05 0.0001585 0.0001906 0.01% DistributionMapping::LeastUsedCPUs() 1 6.678e-06 0.0001535 0.0001839 0.01% FabArrayBase::getCPC() 41 8.032e-05 8.721e-05 0.0001004 0.00% Castro::enforce_consistent_e() 1 7.567e-05 8.764e-05 9.974e-05 0.00% Amr::writeSmallPlotFile() 1 2.481e-05 5.73e-05 7.526e-05 0.00% Castro::finalize_advance() 10 5.297e-05 6.007e-05 6.459e-05 0.00% Castro::enforce_speed_limit() 62 2.697e-05 3.467e-05 4.081e-05 0.00% FabArrayBase::CPC::define() 2 2.674e-05 3.01e-05 3.546e-05 0.00% Castro::create_source_corrector() 10 1.738e-05 1.887e-05 2.066e-05 0.00% Gravity::swapTimeLevels() 10 1.174e-05 1.502e-05 1.798e-05 0.00% Gravity::set_mass_offset() 10 7.066e-06 8.911e-06 1.507e-05 0.00% Amr::initSubcycle() 1 8.118e-06 8.554e-06 9.946e-06 0.00% Castro::FluxRegFineAdd() 10 5.681e-06 6.639e-06 7.568e-06 0.00% Castro::retry_advance_ctu() 10 5.203e-06 5.849e-06 6.932e-06 0.00% DistributionMapping::Distribute() 1 1.005e-06 1.139e-06 1.371e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-11-gc5dce693676e) finalized