MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-11-gc5dce693676e) initialized Starting run at 06:31:07 UTC on 2022-03-11. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.03-11-gc5dce6936 Microphysics git describe: 22.03-3-g9769f857 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013188253 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.338982301 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.342291083 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.339427212 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.313490303 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.312561409 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.336466333 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.297855876 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.290488137 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.290654307 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.289906967 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.00936435 seconds Ending run at 06:31:10 UTC on 2022-03-11. Run time = 3.357344858 Run time without initialization = 3.165344991 Average number of zones advanced per microsecond: 0.828 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.357 ... 3.357 ... 3.357 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1037 2.1869 2.2450 66.87% Gravity::make_radial_gravity() 21 0.3363 0.3474 0.3622 10.79% MultiFab::min() 10 0.03237 0.09281 0.1818 5.41% Castro::initData() 1 0.03954 0.08133 0.126 3.75% Castro::estTimeStep() 21 0.02094 0.07063 0.11 3.28% FabArray::setVal() 143 0.07143 0.07343 0.07709 2.30% FabArray::ParallelCopy_finish() 41 0.03351 0.03949 0.05752 1.71% Castro::reset_internal_energy() 63 0.04882 0.04951 0.05082 1.51% StateData::FillBoundary(geom) 41 0.03678 0.04138 0.04458 1.33% FabArray::ParallelCopy_nowait() 41 0.03865 0.04173 0.04374 1.30% FillPatchIterator::Initialize 41 0.02331 0.03154 0.03481 1.04% Castro::normalize_species() 62 0.03254 0.03321 0.0348 1.04% Gravity::interpolate_monopole_grav() 21 0.02734 0.0277 0.02803 0.83% Castro::construct_new_gravity_source() 10 0.02274 0.02458 0.02647 0.79% Castro::do_advance_ctu() 10 0.0188 0.02043 0.0242 0.72% Castro::expand_state() 10 0.01175 0.01818 0.02092 0.62% Castro::computeTemp() 63 0.01795 0.01862 0.01944 0.58% Castro::initialize_do_advance() 10 0.01041 0.01635 0.01795 0.53% MultiFab::Saxpy() 20 0.01489 0.0158 0.01683 0.50% Castro::initialize_advance() 10 0.0106 0.0124 0.01448 0.43% VisMF::Write(FabArray) 2 0.01123 0.01195 0.01439 0.43% Gravity::get_new_grav_vector() 11 0.01068 0.01145 0.01277 0.38% Castro::construct_old_gravity_source() 10 0.008914 0.01138 0.01206 0.36% FabArray::setDomainBndry() 41 0.006605 0.01032 0.01198 0.36% MultiFab::contains_nan() 20 0.01055 0.0112 0.01192 0.36% Amr::writePlotFile() 2 0.008399 0.01088 0.01158 0.35% Gravity::get_old_grav_vector() 10 0.007868 0.0093 0.01053 0.31% Amr::defBaseLevel() 1 0.006473 0.007604 0.01035 0.31% Castro::enforce_min_density() 62 0.0066 0.006769 0.007003 0.21% Castro::construct_new_source() 50 0.006496 0.006706 0.006879 0.20% StateData::define() 4 0.004291 0.004903 0.006382 0.19% Castro::swap_state_time_levels() 10 0.002981 0.003868 0.004309 0.13% main() 1 0.003473 0.003873 0.004084 0.12% Castro::finalize_do_advance() 10 0.0005089 0.0009629 0.001133 0.03% Amr::coarseTimeStep() 10 0.0003367 0.0005787 0.0009997 0.03% Amr::InitAmr() 1 0.0002837 0.0003373 0.0004449 0.01% Amr::timeStep() 10 0.0001742 0.0002273 0.0004382 0.01% DistributionMapping::LeastUsedCPUs() 1 9.498e-06 0.0001441 0.0002061 0.01% StateDataPhysBCFunct::() 41 0.0001158 0.0001284 0.0001569 0.00% Castro::clean_state() 62 0.0001201 0.0001382 0.0001503 0.00% Castro::enforce_consistent_e() 1 8.057e-05 8.95e-05 9.982e-05 0.00% Castro::construct_old_source() 50 5.833e-05 7.733e-05 9.09e-05 0.00% Amr::FinalizeInit() 1 4.598e-06 1.539e-05 8.237e-05 0.00% Castro::subcycle_advance_ctu() 10 3.527e-05 5.44e-05 7.96e-05 0.00% Castro::do_old_sources() 10 4.517e-05 6.027e-05 7.435e-05 0.00% FillPatchSingleLevel 41 5.632e-05 6.36e-05 7.099e-05 0.00% Castro::do_new_sources() 10 5.025e-05 6.117e-05 6.993e-05 0.00% FabArrayBase::getCPC() 41 4.557e-05 5.608e-05 6.914e-05 0.00% FabArray::ParallelCopy() 41 5.52e-05 6.105e-05 6.535e-05 0.00% Amr::writeSmallPlotFile() 1 2.545e-05 4.9e-05 6.483e-05 0.00% Castro::finalize_advance() 10 5.259e-05 5.752e-05 5.931e-05 0.00% Castro::construct_old_gravity() 10 3.968e-05 4.868e-05 5.846e-05 0.00% Castro::advance() 10 3.441e-05 4.133e-05 5.462e-05 0.00% Castro::apply_source_to_state() 20 3.676e-05 4.751e-05 5.374e-05 0.00% Castro::construct_new_gravity() 10 3.58e-05 4.1e-05 4.303e-05 0.00% Castro::enforce_speed_limit() 62 2.616e-05 3.326e-05 3.957e-05 0.00% FabArrayBase::CPC::define() 2 2.119e-05 2.716e-05 3.654e-05 0.00% Castro::check_for_nan() 20 2.211e-05 2.391e-05 2.58e-05 0.00% Gravity::swapTimeLevels() 10 1.139e-05 1.382e-05 2.224e-05 0.00% Castro::create_source_corrector() 10 1.536e-05 1.764e-05 2.045e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.09e-06 1.107e-05 1.753e-05 0.00% Amr::initSubcycle() 1 8.256e-06 1.061e-05 1.514e-05 0.00% Castro::post_timestep() 10 8.379e-06 9.422e-06 1.031e-05 0.00% Gravity::set_mass_offset() 10 6.83e-06 7.771e-06 1.02e-05 0.00% Castro::computeNewDt() 9 6.866e-06 7.831e-06 8.932e-06 0.00% Castro::post_init() 1 3.291e-06 4.738e-06 8.76e-06 0.00% Castro::retry_advance_ctu() 10 5.517e-06 6.131e-06 6.978e-06 0.00% Castro::FluxRegFineAdd() 10 5.87e-06 6.36e-06 6.927e-06 0.00% Amr::InitializeInit() 1 1.963e-06 3.012e-06 6.569e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.771e-06 5.311e-06 6.408e-06 0.00% Castro::post_regrid() 1 2.18e-06 3.839e-06 5.432e-06 0.00% Castro::computeInitialDt() 2 3.83e-06 4.493e-06 5.33e-06 0.00% Amr::init() 1 1.82e-06 2.334e-06 2.86e-06 0.00% DistributionMapping::Distribute() 1 1.031e-06 1.41e-06 1.932e-06 0.00% Amr::initialInit() 1 1.305e-06 1.582e-06 1.795e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.357 3.357 3.357 100.00% Amr::coarseTimeStep() 10 3.152 3.152 3.152 93.88% Amr::timeStep() 10 3.143 3.143 3.144 93.63% Castro::advance() 10 3.128 3.128 3.129 93.18% Castro::subcycle_advance_ctu() 10 3.052 3.054 3.055 91.00% Castro::do_advance_ctu() 10 3.052 3.053 3.055 91.00% Castro::construct_ctu_hydro_source() 10 2.104 2.187 2.245 66.87% Gravity::make_radial_gravity() 21 0.3363 0.3474 0.3622 10.79% Gravity::get_new_grav_vector() 11 0.2265 0.228 0.2291 6.82% Castro::construct_old_gravity() 10 0.196 0.2052 0.217 6.46% Gravity::get_old_grav_vector() 10 0.1951 0.2044 0.2162 6.44% Castro::construct_new_gravity() 10 0.2008 0.2018 0.2026 6.04% Amr::init() 1 0.1914 0.1915 0.1916 5.71% MultiFab::min() 10 0.03237 0.09281 0.1818 5.41% Amr::initialInit() 1 0.1778 0.1781 0.1783 5.31% FillPatchIterator::Initialize 41 0.1557 0.1648 0.1699 5.06% Castro::initialize_do_advance() 10 0.1378 0.1522 0.1593 4.74% Amr::InitializeInit() 1 0.0566 0.09988 0.1481 4.41% Amr::defBaseLevel() 1 0.0566 0.09988 0.1481 4.41% FillPatchSingleLevel 41 0.1183 0.1229 0.1333 3.97% Castro::initData() 1 0.04327 0.08506 0.1296 3.86% Amr::FinalizeInit() 1 0.0297 0.0782 0.1215 3.62% Castro::expand_state() 10 0.09585 0.1073 0.1127 3.36% Castro::estTimeStep() 21 0.02094 0.07063 0.11 3.28% Castro::clean_state() 62 0.1058 0.1074 0.1099 3.27% FabArray::ParallelCopy() 41 0.07611 0.08137 0.09634 2.87% Castro::computeInitialDt() 2 0.001991 0.05034 0.09358 2.79% FabArray::setVal() 143 0.07143 0.07343 0.07709 2.30% Castro::initialize_advance() 10 0.07301 0.07472 0.07669 2.28% Castro::computeTemp() 63 0.06724 0.06813 0.07025 2.09% Castro::do_new_sources() 10 0.06081 0.06404 0.0677 2.02% FabArray::ParallelCopy_finish() 41 0.03351 0.03949 0.05752 1.71% Castro::reset_internal_energy() 63 0.04882 0.04951 0.05082 1.51% Castro::do_old_sources() 10 0.04487 0.04731 0.04857 1.45% StateDataPhysBCFunct::() 41 0.0369 0.04151 0.0447 1.33% StateData::FillBoundary(geom) 41 0.03678 0.04138 0.04458 1.33% FabArray::ParallelCopy_nowait() 41 0.03875 0.04182 0.04382 1.31% Castro::normalize_species() 62 0.03254 0.03321 0.0348 1.04% Castro::construct_new_source() 50 0.02937 0.03129 0.03334 0.99% Gravity::interpolate_monopole_grav() 21 0.02734 0.0277 0.02803 0.83% Castro::post_init() 1 0.02692 0.02727 0.02745 0.82% Castro::construct_new_gravity_source() 10 0.02274 0.02458 0.02647 0.79% Amr::writePlotFile() 2 0.02269 0.02283 0.02302 0.69% Castro::apply_source_to_state() 20 0.01492 0.01584 0.01688 0.50% MultiFab::Saxpy() 20 0.01489 0.0158 0.01683 0.50% Castro::post_timestep() 10 0.01404 0.01438 0.01487 0.44% VisMF::Write(FabArray) 2 0.01123 0.01195 0.01439 0.43% Castro::construct_old_source() 50 0.008972 0.01146 0.01214 0.36% Castro::construct_old_gravity_source() 10 0.008914 0.01138 0.01206 0.36% FabArray::setDomainBndry() 41 0.006605 0.01032 0.01198 0.36% Castro::check_for_nan() 20 0.01057 0.01123 0.01194 0.36% MultiFab::contains_nan() 20 0.01055 0.0112 0.01192 0.36% Castro::computeNewDt() 9 0.006834 0.007491 0.007945 0.24% Castro::enforce_min_density() 62 0.0066 0.006769 0.007003 0.21% AmrLevel::AmrLevel(dm) 1 0.0043 0.004914 0.006396 0.19% StateData::define() 4 0.004291 0.004903 0.006382 0.19% Castro::swap_state_time_levels() 10 0.002981 0.003868 0.004309 0.13% Castro::post_regrid() 1 0.001387 0.001503 0.001716 0.05% Castro::finalize_do_advance() 10 0.0005089 0.0009629 0.001133 0.03% Amr::InitAmr() 1 0.0002933 0.0003479 0.0004597 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.676e-05 0.0001509 0.0002131 0.01% DistributionMapping::LeastUsedCPUs() 1 9.498e-06 0.0001441 0.0002061 0.01% FabArrayBase::getCPC() 41 7.106e-05 8.325e-05 0.0001023 0.00% Castro::enforce_consistent_e() 1 8.057e-05 8.95e-05 9.982e-05 0.00% Castro::finalize_advance() 10 5.902e-05 6.388e-05 6.624e-05 0.00% Amr::writeSmallPlotFile() 1 2.545e-05 4.9e-05 6.483e-05 0.00% Castro::enforce_speed_limit() 62 2.616e-05 3.326e-05 3.957e-05 0.00% FabArrayBase::CPC::define() 2 2.119e-05 2.716e-05 3.654e-05 0.00% Gravity::swapTimeLevels() 10 1.139e-05 1.382e-05 2.224e-05 0.00% Castro::create_source_corrector() 10 1.536e-05 1.764e-05 2.045e-05 0.00% Amr::initSubcycle() 1 8.256e-06 1.061e-05 1.514e-05 0.00% Gravity::set_mass_offset() 10 6.83e-06 7.771e-06 1.02e-05 0.00% Castro::retry_advance_ctu() 10 5.517e-06 6.131e-06 6.978e-06 0.00% Castro::FluxRegFineAdd() 10 5.87e-06 6.36e-06 6.927e-06 0.00% DistributionMapping::Distribute() 1 1.031e-06 1.41e-06 1.932e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-11-gc5dce693676e) finalized