MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-12-g806f2373b68e) initialized Starting run at 18:04:25 UTC on 2022-03-12. Successfully read inputs file ... Castro git describe: 22.02-4-g0d942c92d AMReX git describe: 22.03-12-g806f2373b Microphysics git describe: 22.03-5-gb7734485 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013271355 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.343805825 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.334580596 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.307417312 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.310399935 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.307603445 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.327995684 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.293965519 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.287228857 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.287190239 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.292967614 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009232105 seconds Ending run at 18:04:28 UTC on 2022-03-12. Run time = 3.322025753 Run time without initialization = 3.105777988 Average number of zones advanced per microsecond: 0.844 Average number of zones advanced per microsecond per rank: 0.106 TinyProfiler total time across processes [min...avg...max]: 3.322 ... 3.322 ... 3.322 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1276 2.1700 2.1888 65.89% Gravity::make_radial_gravity() 21 0.3298 0.3396 0.3542 10.66% Castro::initData() 1 0.04008 0.08825 0.1504 4.53% Castro::estTimeStep() 21 0.0186 0.08846 0.1322 3.98% MultiFab::min() 10 0.05057 0.07381 0.1176 3.54% FabArray::setVal() 143 0.06148 0.06948 0.0751 2.26% FabArray::ParallelCopy_finish() 41 0.03181 0.04025 0.06999 2.11% Castro::reset_internal_energy() 63 0.04874 0.04993 0.05134 1.55% StateData::FillBoundary(geom) 41 0.03886 0.04133 0.04449 1.34% FabArray::ParallelCopy_nowait() 41 0.03462 0.03924 0.04139 1.25% Castro::normalize_species() 62 0.03231 0.03294 0.03369 1.01% FillPatchIterator::Initialize 41 0.02332 0.02877 0.03213 0.97% Gravity::interpolate_monopole_grav() 21 0.02736 0.02771 0.02829 0.85% Castro::construct_new_gravity_source() 10 0.02055 0.0235 0.02642 0.80% Castro::do_advance_ctu() 10 0.01495 0.01919 0.02328 0.70% Castro::expand_state() 10 0.01237 0.0182 0.02101 0.63% Castro::computeTemp() 63 0.01853 0.01885 0.0193 0.58% Castro::initialize_do_advance() 10 0.01076 0.01597 0.0174 0.52% MultiFab::Saxpy() 20 0.01285 0.01472 0.01584 0.48% VisMF::Write(FabArray) 2 0.01176 0.01223 0.01421 0.43% Castro::initialize_advance() 10 0.00846 0.0116 0.01401 0.42% Gravity::get_new_grav_vector() 11 0.00969 0.0107 0.0127 0.38% MultiFab::contains_nan() 20 0.01027 0.01103 0.01186 0.36% Castro::construct_old_gravity_source() 10 0.007347 0.01086 0.01165 0.35% Amr::writePlotFile() 2 0.008517 0.0104 0.01102 0.33% FabArray::setDomainBndry() 41 0.007121 0.009423 0.01081 0.33% Gravity::get_old_grav_vector() 10 0.007079 0.00861 0.01043 0.31% Amr::defBaseLevel() 1 0.006677 0.008009 0.01025 0.31% Castro::construct_new_source() 50 0.005821 0.006339 0.00666 0.20% Castro::enforce_min_density() 62 0.00572 0.006088 0.006533 0.20% StateData::define() 4 0.004421 0.005203 0.006511 0.20% main() 1 0.003601 0.003938 0.00414 0.12% Castro::swap_state_time_levels() 10 0.002784 0.003569 0.003825 0.12% Castro::finalize_do_advance() 10 0.0004651 0.001069 0.001276 0.04% Amr::coarseTimeStep() 10 0.000318 0.0005788 0.0008286 0.02% Amr::InitAmr() 1 0.0002849 0.0003518 0.0004598 0.01% Amr::timeStep() 10 0.0001656 0.0002171 0.0004296 0.01% DistributionMapping::LeastUsedCPUs() 1 8.517e-06 0.0001481 0.0002298 0.01% Castro::clean_state() 62 0.0001267 0.0001419 0.0001689 0.01% StateDataPhysBCFunct::() 41 0.000103 0.0001262 0.000151 0.00% Castro::enforce_consistent_e() 1 7.528e-05 9.556e-05 0.0001491 0.00% Castro::construct_old_source() 50 4.785e-05 6.998e-05 8.816e-05 0.00% Castro::do_old_sources() 10 4.062e-05 5.564e-05 7.51e-05 0.00% FabArray::ParallelCopy() 41 5.666e-05 6.23e-05 6.985e-05 0.00% Amr::FinalizeInit() 1 4.049e-06 1.328e-05 6.86e-05 0.00% Castro::do_new_sources() 10 4.806e-05 5.61e-05 6.799e-05 0.00% FabArrayBase::getCPC() 41 4.544e-05 5.521e-05 6.765e-05 0.00% Castro::subcycle_advance_ctu() 10 3.994e-05 5.516e-05 6.758e-05 0.00% FillPatchSingleLevel 41 5.219e-05 6.16e-05 6.667e-05 0.00% Castro::construct_old_gravity() 10 4.203e-05 5.138e-05 5.988e-05 0.00% Amr::writeSmallPlotFile() 1 2.52e-05 5.135e-05 5.802e-05 0.00% Castro::finalize_advance() 10 5.381e-05 5.593e-05 5.75e-05 0.00% Castro::advance() 10 3.08e-05 3.747e-05 5.065e-05 0.00% Castro::apply_source_to_state() 20 3.735e-05 4.267e-05 5.062e-05 0.00% Castro::construct_new_gravity() 10 3.731e-05 4.175e-05 4.539e-05 0.00% Castro::enforce_speed_limit() 62 2.952e-05 3.348e-05 3.668e-05 0.00% FabArrayBase::CPC::define() 2 2.193e-05 2.541e-05 3.109e-05 0.00% Gravity::swapTimeLevels() 10 1.031e-05 1.34e-05 2.498e-05 0.00% Castro::check_for_nan() 20 1.996e-05 2.256e-05 2.446e-05 0.00% Castro::create_source_corrector() 10 1.237e-05 1.765e-05 2.405e-05 0.00% Amr::initSubcycle() 1 8.812e-06 1.092e-05 1.558e-05 0.00% AmrLevel::AmrLevel(dm) 1 9.065e-06 1.07e-05 1.417e-05 0.00% Castro::post_timestep() 10 7.253e-06 9.097e-06 1.075e-05 0.00% Castro::post_init() 1 3.15e-06 4.363e-06 9.69e-06 0.00% Castro::computeNewDt() 9 6.115e-06 7.948e-06 8.714e-06 0.00% Amr::InitializeInit() 1 2.184e-06 3.254e-06 8.19e-06 0.00% Gravity::set_mass_offset() 10 7.13e-06 7.514e-06 8.185e-06 0.00% Castro::retry_advance_ctu() 10 5.281e-06 5.974e-06 7.803e-06 0.00% Castro::FluxRegFineAdd() 10 6.025e-06 6.723e-06 7.402e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.894e-06 4.978e-06 6.472e-06 0.00% Castro::post_regrid() 1 2.097e-06 3.555e-06 5.674e-06 0.00% Castro::computeInitialDt() 2 3.505e-06 4.071e-06 5.05e-06 0.00% Amr::init() 1 2.046e-06 2.288e-06 2.593e-06 0.00% Amr::initialInit() 1 1.254e-06 1.691e-06 2.076e-06 0.00% DistributionMapping::Distribute() 1 1.034e-06 1.198e-06 1.466e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.321 3.322 3.322 100.00% Amr::coarseTimeStep() 10 3.092 3.092 3.092 93.09% Amr::timeStep() 10 3.083 3.083 3.084 92.83% Castro::advance() 10 3.068 3.069 3.069 92.38% Castro::subcycle_advance_ctu() 10 2.994 2.997 3.005 90.45% Castro::do_advance_ctu() 10 2.994 2.997 3.005 90.45% Castro::construct_ctu_hydro_source() 10 2.128 2.17 2.189 65.89% Gravity::make_radial_gravity() 21 0.3298 0.3396 0.3542 10.66% Gravity::get_new_grav_vector() 11 0.2182 0.2203 0.2215 6.67% Amr::init() 1 0.2156 0.2157 0.2158 6.50% Castro::construct_old_gravity() 10 0.1961 0.2026 0.215 6.47% Gravity::get_old_grav_vector() 10 0.1953 0.2018 0.2143 6.45% Amr::initialInit() 1 0.202 0.2024 0.2028 6.10% Castro::construct_new_gravity() 10 0.193 0.1941 0.1958 5.89% FillPatchIterator::Initialize 41 0.1474 0.1593 0.1769 5.32% Amr::InitializeInit() 1 0.05808 0.1076 0.1728 5.20% Amr::defBaseLevel() 1 0.05807 0.1076 0.1728 5.20% Castro::initialize_do_advance() 10 0.1427 0.1502 0.1553 4.68% Castro::initData() 1 0.04362 0.09222 0.1543 4.64% FillPatchSingleLevel 41 0.1152 0.1212 0.1464 4.41% Amr::FinalizeInit() 1 0.02919 0.0948 0.1442 4.34% Castro::estTimeStep() 21 0.0186 0.08846 0.1322 3.98% MultiFab::min() 10 0.05057 0.07381 0.1176 3.54% Castro::computeInitialDt() 2 0.001787 0.06714 0.1166 3.51% Castro::expand_state() 10 0.0971 0.1059 0.1119 3.37% Castro::clean_state() 62 0.105 0.1069 0.1093 3.29% FabArray::ParallelCopy() 41 0.07335 0.07964 0.1048 3.15% FabArray::setVal() 143 0.06148 0.06948 0.0751 2.26% Castro::initialize_advance() 10 0.06341 0.07203 0.07507 2.26% Castro::computeTemp() 63 0.0673 0.06878 0.07031 2.12% FabArray::ParallelCopy_finish() 41 0.03181 0.04025 0.06999 2.11% Castro::do_new_sources() 10 0.05599 0.06102 0.06655 2.00% Castro::reset_internal_energy() 63 0.04874 0.04993 0.05134 1.55% Castro::do_old_sources() 10 0.04028 0.04534 0.04681 1.41% StateDataPhysBCFunct::() 41 0.03897 0.04146 0.04463 1.34% StateData::FillBoundary(geom) 41 0.03886 0.04133 0.04449 1.34% FabArray::ParallelCopy_nowait() 41 0.03471 0.03932 0.04147 1.25% Castro::normalize_species() 62 0.03231 0.03294 0.03369 1.01% Castro::construct_new_source() 50 0.02637 0.02984 0.03308 1.00% Gravity::interpolate_monopole_grav() 21 0.02736 0.02771 0.02829 0.85% Castro::post_init() 1 0.02669 0.02709 0.02744 0.83% Castro::construct_new_gravity_source() 10 0.02055 0.0235 0.02642 0.80% Amr::writePlotFile() 2 0.02232 0.02263 0.02289 0.69% Castro::apply_source_to_state() 20 0.01289 0.01477 0.01589 0.48% MultiFab::Saxpy() 20 0.01285 0.01472 0.01584 0.48% Castro::post_timestep() 10 0.01386 0.01434 0.01477 0.44% VisMF::Write(FabArray) 2 0.01176 0.01223 0.01421 0.43% Castro::check_for_nan() 20 0.01029 0.01105 0.01189 0.36% MultiFab::contains_nan() 20 0.01027 0.01103 0.01186 0.36% Castro::construct_old_source() 50 0.007395 0.01093 0.01172 0.35% Castro::construct_old_gravity_source() 10 0.007347 0.01086 0.01165 0.35% FabArray::setDomainBndry() 41 0.007121 0.009423 0.01081 0.33% Castro::computeNewDt() 9 0.006962 0.007564 0.008085 0.24% Castro::enforce_min_density() 62 0.00572 0.006088 0.006533 0.20% AmrLevel::AmrLevel(dm) 1 0.004431 0.005213 0.006525 0.20% StateData::define() 4 0.004421 0.005203 0.006511 0.20% Castro::swap_state_time_levels() 10 0.002784 0.003569 0.003825 0.12% Castro::post_regrid() 1 0.001418 0.001512 0.001661 0.05% Castro::finalize_do_advance() 10 0.0004651 0.001069 0.001276 0.04% Amr::InitAmr() 1 0.000294 0.0003627 0.0004754 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.438e-05 0.0001543 0.0002374 0.01% DistributionMapping::LeastUsedCPUs() 1 8.517e-06 0.0001481 0.0002298 0.01% Castro::enforce_consistent_e() 1 7.528e-05 9.556e-05 0.0001491 0.00% FabArrayBase::getCPC() 41 7.079e-05 8.062e-05 9.572e-05 0.00% Castro::finalize_advance() 10 6.061e-05 6.265e-05 6.467e-05 0.00% Amr::writeSmallPlotFile() 1 2.52e-05 5.135e-05 5.802e-05 0.00% Castro::enforce_speed_limit() 62 2.952e-05 3.348e-05 3.668e-05 0.00% FabArrayBase::CPC::define() 2 2.193e-05 2.541e-05 3.109e-05 0.00% Gravity::swapTimeLevels() 10 1.031e-05 1.34e-05 2.498e-05 0.00% Castro::create_source_corrector() 10 1.237e-05 1.765e-05 2.405e-05 0.00% Amr::initSubcycle() 1 8.812e-06 1.092e-05 1.558e-05 0.00% Gravity::set_mass_offset() 10 7.13e-06 7.514e-06 8.185e-06 0.00% Castro::retry_advance_ctu() 10 5.281e-06 5.974e-06 7.803e-06 0.00% Castro::FluxRegFineAdd() 10 6.025e-06 6.723e-06 7.402e-06 0.00% DistributionMapping::Distribute() 1 1.034e-06 1.198e-06 1.466e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-12-g806f2373b68e) finalized