MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-12-g806f2373b68e) initialized Starting run at 05:36:51 UTC on 2022-03-14. Successfully read inputs file ... Castro git describe: 22.02-5-g5116b7268 AMReX git describe: 22.03-12-g806f2373b Microphysics git describe: 22.03-6-g41c4af20 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013706787 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.334199597 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.331233725 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.32250996 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.322964772 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.326138454 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.347842197 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.297343278 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.290712455 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.292141488 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.290583446 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.028195732 seconds Ending run at 05:36:54 UTC on 2022-03-14. Run time = 3.361409159 Run time without initialization = 3.187867598 Average number of zones advanced per microsecond: 0.822 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.361 ... 3.361 ... 3.361 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0913 2.1950 2.2491 66.91% Gravity::make_radial_gravity() 21 0.3378 0.3517 0.3765 11.20% MultiFab::min() 10 0.01565 0.07325 0.183 5.44% Castro::initData() 1 0.03946 0.07868 0.1143 3.40% Castro::estTimeStep() 21 0.02002 0.05701 0.1018 3.03% FabArray::ParallelCopy_finish() 41 0.03604 0.04306 0.07657 2.28% FabArray::setVal() 143 0.06521 0.07192 0.07555 2.25% Castro::reset_internal_energy() 63 0.04824 0.04988 0.05139 1.53% StateData::FillBoundary(geom) 41 0.03772 0.04295 0.04639 1.38% FabArray::ParallelCopy_nowait() 41 0.03615 0.04341 0.04515 1.34% FillPatchIterator::Initialize 41 0.02318 0.03352 0.03533 1.05% Castro::normalize_species() 62 0.03274 0.03325 0.03394 1.01% Amr::writePlotFile() 2 0.02778 0.02985 0.03041 0.90% Gravity::interpolate_monopole_grav() 21 0.0277 0.02823 0.02871 0.85% Castro::construct_new_gravity_source() 10 0.0206 0.02341 0.0262 0.78% Castro::do_advance_ctu() 10 0.01679 0.02091 0.02531 0.75% Castro::expand_state() 10 0.01004 0.01903 0.02164 0.64% Castro::computeTemp() 63 0.01768 0.01876 0.01954 0.58% Castro::initialize_do_advance() 10 0.01022 0.01719 0.0192 0.57% MultiFab::Saxpy() 20 0.01442 0.01512 0.01583 0.47% Castro::initialize_advance() 10 0.01064 0.01227 0.01465 0.44% VisMF::Write(FabArray) 2 0.01178 0.01223 0.01438 0.43% Gravity::get_new_grav_vector() 11 0.009325 0.01142 0.01292 0.38% FabArray::setDomainBndry() 41 0.006813 0.0114 0.0127 0.38% MultiFab::contains_nan() 20 0.01036 0.0116 0.01244 0.37% Castro::construct_old_gravity_source() 10 0.007048 0.01121 0.01216 0.36% Gravity::get_old_grav_vector() 10 0.006608 0.009539 0.01055 0.31% Amr::defBaseLevel() 1 0.006589 0.007026 0.008355 0.25% Castro::construct_new_source() 50 0.005605 0.006495 0.006848 0.20% Castro::enforce_min_density() 62 0.005917 0.006191 0.006425 0.19% StateData::define() 4 0.004312 0.004473 0.004897 0.15% main() 1 0.00349 0.003862 0.004108 0.12% Castro::swap_state_time_levels() 10 0.002447 0.003732 0.004053 0.12% Amr::coarseTimeStep() 10 0.0004109 0.0008065 0.001496 0.04% Castro::finalize_do_advance() 10 0.0004482 0.0008396 0.001029 0.03% Amr::timeStep() 10 0.0001511 0.0002192 0.0005005 0.01% Amr::InitAmr() 1 0.0002806 0.0003042 0.000369 0.01% Castro::clean_state() 62 0.0001359 0.0001526 0.0001739 0.01% StateDataPhysBCFunct::() 41 0.0001208 0.000135 0.0001565 0.00% DistributionMapping::LeastUsedCPUs() 1 7.683e-06 9.847e-05 0.0001236 0.00% Castro::construct_old_source() 50 5.97e-05 8.342e-05 9.887e-05 0.00% Castro::enforce_consistent_e() 1 7.867e-05 8.63e-05 9.689e-05 0.00% Amr::FinalizeInit() 1 3.627e-06 1.542e-05 8.551e-05 0.00% FabArrayBase::getCPC() 41 5.138e-05 6.201e-05 8.139e-05 0.00% Castro::do_old_sources() 10 4.858e-05 6.175e-05 7.883e-05 0.00% FillPatchSingleLevel 41 5.963e-05 6.687e-05 7.477e-05 0.00% FabArray::ParallelCopy() 41 6.268e-05 6.87e-05 7.416e-05 0.00% Castro::subcycle_advance_ctu() 10 3.952e-05 5.926e-05 7.323e-05 0.00% Castro::do_new_sources() 10 5.447e-05 6.365e-05 7.065e-05 0.00% Amr::writeSmallPlotFile() 1 5.178e-05 5.88e-05 6.846e-05 0.00% Castro::construct_old_gravity() 10 5.256e-05 5.79e-05 6.618e-05 0.00% Castro::finalize_advance() 10 5.243e-05 5.563e-05 5.992e-05 0.00% Castro::advance() 10 3.757e-05 4.554e-05 5.962e-05 0.00% Castro::apply_source_to_state() 20 3.966e-05 4.811e-05 5.606e-05 0.00% Castro::construct_new_gravity() 10 4.015e-05 4.576e-05 5.585e-05 0.00% Castro::enforce_speed_limit() 62 2.955e-05 3.437e-05 3.758e-05 0.00% FabArrayBase::CPC::define() 2 2.262e-05 2.724e-05 3.462e-05 0.00% Castro::check_for_nan() 20 2.382e-05 2.648e-05 2.841e-05 0.00% Castro::create_source_corrector() 10 1.697e-05 1.852e-05 2.119e-05 0.00% Gravity::swapTimeLevels() 10 1.27e-05 1.391e-05 1.57e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.513e-06 8.517e-06 1.071e-05 0.00% Castro::post_timestep() 10 8.676e-06 9.272e-06 1.024e-05 0.00% Castro::post_init() 1 3.117e-06 4.354e-06 9.584e-06 0.00% Amr::initSubcycle() 1 8.379e-06 8.823e-06 9.504e-06 0.00% Gravity::set_mass_offset() 10 6.575e-06 7.651e-06 9.091e-06 0.00% Castro::computeNewDt() 9 6.812e-06 7.44e-06 8.292e-06 0.00% Castro::FluxRegFineAdd() 10 5.807e-06 6.876e-06 7.99e-06 0.00% Castro::retry_advance_ctu() 10 4.911e-06 6.146e-06 7.079e-06 0.00% Amr::InitializeInit() 1 2.003e-06 3.033e-06 5.791e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.753e-06 4.47e-06 5.678e-06 0.00% Castro::post_regrid() 1 1.744e-06 3.164e-06 4.579e-06 0.00% Castro::computeInitialDt() 2 2.982e-06 3.611e-06 4.34e-06 0.00% Amr::init() 1 1.899e-06 2.103e-06 2.467e-06 0.00% Amr::initialInit() 1 1.304e-06 1.559e-06 1.762e-06 0.00% DistributionMapping::Distribute() 1 9e-07 1.093e-06 1.386e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.361 3.361 3.361 100.00% Amr::coarseTimeStep() 10 3.156 3.156 3.156 93.88% Amr::timeStep() 10 3.146 3.147 3.147 93.62% Castro::advance() 10 3.132 3.132 3.132 93.19% Castro::subcycle_advance_ctu() 10 3.055 3.058 3.061 91.06% Castro::do_advance_ctu() 10 3.055 3.058 3.061 91.06% Castro::construct_ctu_hydro_source() 10 2.091 2.195 2.249 66.91% Gravity::make_radial_gravity() 21 0.3378 0.3517 0.3765 11.20% Castro::construct_old_gravity() 10 0.2041 0.2163 0.2365 7.03% Gravity::get_old_grav_vector() 10 0.2033 0.2156 0.2359 7.02% Gravity::get_new_grav_vector() 11 0.2235 0.2241 0.2245 6.68% Castro::construct_new_gravity() 10 0.1997 0.2002 0.2009 5.98% MultiFab::min() 10 0.01565 0.07325 0.183 5.44% FillPatchIterator::Initialize 41 0.1702 0.1747 0.1808 5.38% Amr::init() 1 0.173 0.1731 0.1731 5.15% Castro::initialize_do_advance() 10 0.1415 0.1593 0.1656 4.93% Amr::initialInit() 1 0.1591 0.1593 0.1595 4.74% FillPatchSingleLevel 41 0.1225 0.1298 0.1508 4.49% Amr::InitializeInit() 1 0.05705 0.09671 0.1322 3.93% Amr::defBaseLevel() 1 0.05704 0.0967 0.1322 3.93% Castro::expand_state() 10 0.1054 0.1136 0.1202 3.58% Castro::initData() 1 0.04352 0.08262 0.1185 3.52% FabArray::ParallelCopy() 41 0.08034 0.08662 0.1129 3.36% Castro::clean_state() 62 0.1048 0.1073 0.1093 3.25% Amr::FinalizeInit() 1 0.02715 0.06259 0.1021 3.04% Castro::estTimeStep() 21 0.02002 0.05701 0.1018 3.03% Castro::initialize_advance() 10 0.07077 0.0738 0.07752 2.31% Castro::computeInitialDt() 2 0.001687 0.03721 0.07678 2.28% FabArray::ParallelCopy_finish() 41 0.03604 0.04306 0.07657 2.28% FabArray::setVal() 143 0.06521 0.07192 0.07555 2.25% Castro::computeTemp() 63 0.06645 0.06864 0.07054 2.10% Castro::do_new_sources() 10 0.05694 0.06194 0.06617 1.97% Castro::reset_internal_energy() 63 0.04824 0.04988 0.05139 1.53% Castro::do_old_sources() 10 0.04031 0.04625 0.0475 1.41% StateDataPhysBCFunct::() 41 0.03785 0.04309 0.04652 1.38% StateData::FillBoundary(geom) 41 0.03772 0.04295 0.04639 1.38% FabArray::ParallelCopy_nowait() 41 0.03626 0.0435 0.04524 1.35% Amr::writePlotFile() 2 0.04191 0.04209 0.04236 1.26% Castro::normalize_species() 62 0.03274 0.03325 0.03394 1.01% Castro::construct_new_source() 50 0.0262 0.02991 0.03292 0.98% Gravity::interpolate_monopole_grav() 21 0.0277 0.02823 0.02871 0.85% Castro::construct_new_gravity_source() 10 0.0206 0.02341 0.0262 0.78% Castro::post_init() 1 0.02462 0.02483 0.02497 0.74% Castro::apply_source_to_state() 20 0.01448 0.01516 0.01588 0.47% MultiFab::Saxpy() 20 0.01442 0.01512 0.01583 0.47% Castro::post_timestep() 10 0.01391 0.01425 0.01448 0.43% VisMF::Write(FabArray) 2 0.01178 0.01223 0.01438 0.43% FabArray::setDomainBndry() 41 0.006813 0.0114 0.0127 0.38% Castro::check_for_nan() 20 0.01038 0.01162 0.01247 0.37% MultiFab::contains_nan() 20 0.01036 0.0116 0.01244 0.37% Castro::construct_old_source() 50 0.007108 0.01129 0.01225 0.36% Castro::construct_old_gravity_source() 10 0.007048 0.01121 0.01216 0.36% Castro::computeNewDt() 9 0.006696 0.007148 0.007455 0.22% Castro::enforce_min_density() 62 0.005917 0.006191 0.006425 0.19% AmrLevel::AmrLevel(dm) 1 0.004321 0.004481 0.004905 0.15% StateData::define() 4 0.004312 0.004473 0.004897 0.15% Castro::swap_state_time_levels() 10 0.002447 0.003732 0.004053 0.12% Castro::post_regrid() 1 0.001372 0.001451 0.00151 0.04% Castro::finalize_do_advance() 10 0.0004482 0.0008396 0.001029 0.03% Amr::InitAmr() 1 0.0002895 0.000313 0.0003775 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.258e-05 0.000104 0.0001306 0.00% DistributionMapping::LeastUsedCPUs() 1 7.683e-06 9.847e-05 0.0001236 0.00% FabArrayBase::getCPC() 41 7.4e-05 8.925e-05 0.000116 0.00% Castro::enforce_consistent_e() 1 7.867e-05 8.63e-05 9.689e-05 0.00% Amr::writeSmallPlotFile() 1 5.178e-05 5.88e-05 6.846e-05 0.00% Castro::finalize_advance() 10 5.824e-05 6.251e-05 6.712e-05 0.00% Castro::enforce_speed_limit() 62 2.955e-05 3.437e-05 3.758e-05 0.00% FabArrayBase::CPC::define() 2 2.262e-05 2.724e-05 3.462e-05 0.00% Castro::create_source_corrector() 10 1.697e-05 1.852e-05 2.119e-05 0.00% Gravity::swapTimeLevels() 10 1.27e-05 1.391e-05 1.57e-05 0.00% Amr::initSubcycle() 1 8.379e-06 8.823e-06 9.504e-06 0.00% Gravity::set_mass_offset() 10 6.575e-06 7.651e-06 9.091e-06 0.00% Castro::FluxRegFineAdd() 10 5.807e-06 6.876e-06 7.99e-06 0.00% Castro::retry_advance_ctu() 10 4.911e-06 6.146e-06 7.079e-06 0.00% DistributionMapping::Distribute() 1 9e-07 1.093e-06 1.386e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-12-g806f2373b68e) finalized