MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-12-g806f2373b68e) initialized Starting run at 05:36:51 UTC on 2022-03-15. Successfully read inputs file ... Castro git describe: 22.02-5-g5116b7268 AMReX git describe: 22.03-12-g806f2373b Microphysics git describe: 22.03-6-g41c4af20 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014428364 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.336935497 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.329610475 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.336003433 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.31445359 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.315777057 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.341158246 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.297440281 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.292130456 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.292707129 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.292683259 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009418673 seconds Ending run at 05:36:54 UTC on 2022-03-15. Run time = 3.333802869 Run time without initialization = 3.161431556 Average number of zones advanced per microsecond: 0.829 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.334 ... 3.334 ... 3.334 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1350 2.1819 2.2369 67.10% Gravity::make_radial_gravity() 21 0.3344 0.3488 0.3726 11.18% MultiFab::min() 10 0.02693 0.08588 0.133 3.99% Castro::initData() 1 0.03758 0.07572 0.1114 3.34% Castro::estTimeStep() 21 0.02043 0.06237 0.1043 3.13% FabArray::setVal() 143 0.06657 0.07141 0.07662 2.30% FabArray::ParallelCopy_finish() 41 0.03653 0.0453 0.06861 2.06% Castro::reset_internal_energy() 63 0.04778 0.05016 0.05253 1.58% StateData::FillBoundary(geom) 41 0.03892 0.04281 0.04642 1.39% FabArray::ParallelCopy_nowait() 41 0.03373 0.04104 0.04361 1.31% Castro::normalize_species() 62 0.03273 0.03357 0.03484 1.05% FillPatchIterator::Initialize 41 0.02413 0.03106 0.03421 1.03% Gravity::interpolate_monopole_grav() 21 0.02767 0.02819 0.02888 0.87% Castro::construct_new_gravity_source() 10 0.02013 0.02347 0.02634 0.79% Castro::do_advance_ctu() 10 0.01293 0.01934 0.02478 0.74% Castro::expand_state() 10 0.01046 0.01816 0.02123 0.64% Castro::computeTemp() 63 0.01763 0.01891 0.01951 0.59% Castro::initialize_do_advance() 10 0.01106 0.01624 0.01806 0.54% MultiFab::Saxpy() 20 0.01317 0.01471 0.01618 0.49% VisMF::Write(FabArray) 2 0.01233 0.01283 0.01527 0.46% Castro::initialize_advance() 10 0.01067 0.01252 0.01473 0.44% Gravity::get_new_grav_vector() 11 0.009938 0.01122 0.01327 0.40% MultiFab::contains_nan() 20 0.01015 0.01116 0.01251 0.38% Amr::writePlotFile() 2 0.008837 0.01132 0.012 0.36% Gravity::get_old_grav_vector() 10 0.006865 0.009136 0.01175 0.35% Castro::construct_old_gravity_source() 10 0.007232 0.01084 0.01172 0.35% FabArray::setDomainBndry() 41 0.006838 0.01012 0.01159 0.35% Amr::defBaseLevel() 1 0.006548 0.00726 0.008805 0.26% Castro::construct_new_source() 50 0.005685 0.006328 0.006607 0.20% StateData::define() 4 0.004353 0.004966 0.006435 0.19% Castro::enforce_min_density() 62 0.005756 0.006115 0.006382 0.19% main() 1 0.00376 0.003903 0.004069 0.12% Castro::swap_state_time_levels() 10 0.002437 0.003581 0.003752 0.11% Amr::coarseTimeStep() 10 0.0003721 0.0006307 0.001756 0.05% Castro::finalize_do_advance() 10 0.0004587 0.0008274 0.0009531 0.03% Amr::InitAmr() 1 0.000285 0.0003507 0.000469 0.01% Amr::timeStep() 10 0.0001733 0.0002212 0.0004082 0.01% DistributionMapping::LeastUsedCPUs() 1 8.57e-06 0.0001394 0.0002109 0.01% Castro::clean_state() 62 0.0001309 0.0001446 0.0001595 0.00% StateDataPhysBCFunct::() 41 0.0001075 0.0001307 0.0001424 0.00% Amr::FinalizeInit() 1 3.891e-06 1.584e-05 9.256e-05 0.00% Castro::enforce_consistent_e() 1 8.004e-05 8.471e-05 8.915e-05 0.00% FabArrayBase::getCPC() 41 4.235e-05 5.761e-05 7.848e-05 0.00% Castro::construct_old_source() 50 5.108e-05 6.926e-05 7.684e-05 0.00% Castro::do_old_sources() 10 4.576e-05 5.627e-05 6.937e-05 0.00% Castro::subcycle_advance_ctu() 10 3.945e-05 5.466e-05 6.797e-05 0.00% FillPatchSingleLevel 41 5.581e-05 6.125e-05 6.677e-05 0.00% Castro::do_new_sources() 10 4.744e-05 5.519e-05 6.55e-05 0.00% FabArray::ParallelCopy() 41 5.55e-05 6.156e-05 6.497e-05 0.00% Castro::apply_source_to_state() 20 3.787e-05 4.822e-05 6.221e-05 0.00% Amr::writeSmallPlotFile() 1 2.494e-05 4.734e-05 6.023e-05 0.00% Castro::construct_old_gravity() 10 4.623e-05 5.115e-05 5.886e-05 0.00% Castro::finalize_advance() 10 5.32e-05 5.481e-05 5.8e-05 0.00% Castro::construct_new_gravity() 10 4.133e-05 4.534e-05 4.913e-05 0.00% Castro::advance() 10 3.141e-05 4.05e-05 4.685e-05 0.00% Castro::enforce_speed_limit() 62 2.715e-05 3.369e-05 4.268e-05 0.00% FabArrayBase::CPC::define() 2 2.333e-05 2.653e-05 3.568e-05 0.00% Castro::check_for_nan() 20 2.064e-05 2.387e-05 2.839e-05 0.00% Castro::create_source_corrector() 10 1.482e-05 1.715e-05 1.964e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.994e-06 1.141e-05 1.862e-05 0.00% Gravity::swapTimeLevels() 10 1.03e-05 1.254e-05 1.614e-05 0.00% Amr::initSubcycle() 1 8.363e-06 1.049e-05 1.501e-05 0.00% Castro::post_timestep() 10 7.691e-06 9.661e-06 1.096e-05 0.00% Castro::post_init() 1 3.795e-06 5.659e-06 1.01e-05 0.00% Gravity::set_mass_offset() 10 7.017e-06 7.643e-06 9.021e-06 0.00% Castro::computeNewDt() 9 6.854e-06 7.869e-06 8.956e-06 0.00% Amr::initialInit() 1 1.412e-06 2.579e-06 8.908e-06 0.00% Castro::FluxRegFineAdd() 10 5.649e-06 6.591e-06 7.59e-06 0.00% Castro::retry_advance_ctu() 10 4.704e-06 5.928e-06 7.531e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.967e-06 5.102e-06 6.532e-06 0.00% Amr::InitializeInit() 1 1.981e-06 2.936e-06 5.822e-06 0.00% Castro::computeInitialDt() 2 2.535e-06 4.434e-06 5.466e-06 0.00% Castro::post_regrid() 1 1.973e-06 2.775e-06 4.384e-06 0.00% Amr::init() 1 1.726e-06 2.273e-06 2.987e-06 0.00% DistributionMapping::Distribute() 1 8.71e-07 1.235e-06 1.509e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.334 3.334 3.334 100.00% Amr::coarseTimeStep() 10 3.148 3.148 3.148 94.43% Amr::timeStep() 10 3.138 3.138 3.139 94.15% Castro::advance() 10 3.123 3.124 3.124 93.70% Castro::subcycle_advance_ctu() 10 3.046 3.049 3.051 91.51% Castro::do_advance_ctu() 10 3.046 3.049 3.051 91.51% Castro::construct_ctu_hydro_source() 10 2.135 2.182 2.237 67.10% Gravity::make_radial_gravity() 21 0.3344 0.3488 0.3726 11.18% Castro::construct_old_gravity() 10 0.1998 0.2094 0.2299 6.90% Gravity::get_old_grav_vector() 10 0.1989 0.2087 0.2293 6.88% Gravity::get_new_grav_vector() 11 0.2245 0.2264 0.2278 6.83% Castro::construct_new_gravity() 10 0.2014 0.2031 0.2043 6.13% FillPatchIterator::Initialize 41 0.1585 0.1707 0.1776 5.33% Amr::init() 1 0.1717 0.1719 0.1719 5.16% Castro::initialize_do_advance() 10 0.1379 0.1537 0.1613 4.84% Amr::initialInit() 1 0.1571 0.1572 0.1574 4.72% FillPatchSingleLevel 41 0.1243 0.1295 0.1416 4.25% MultiFab::min() 10 0.02693 0.08588 0.133 3.99% Amr::InitializeInit() 1 0.05636 0.09379 0.1305 3.92% Amr::defBaseLevel() 1 0.05635 0.09379 0.1305 3.91% Castro::initData() 1 0.04094 0.07938 0.1153 3.46% Castro::expand_state() 10 0.09896 0.1086 0.1148 3.44% Castro::clean_state() 62 0.1032 0.108 0.1112 3.34% Castro::estTimeStep() 21 0.02043 0.06237 0.1043 3.13% FabArray::ParallelCopy() 41 0.07991 0.08648 0.1025 3.07% Amr::FinalizeInit() 1 0.02664 0.06339 0.1008 3.02% Castro::initialize_advance() 10 0.07303 0.07493 0.07744 2.32% FabArray::setVal() 143 0.06657 0.07141 0.07662 2.30% Castro::computeInitialDt() 2 0.001781 0.03865 0.07599 2.28% Castro::computeTemp() 63 0.06541 0.06906 0.07204 2.16% FabArray::ParallelCopy_finish() 41 0.03653 0.0453 0.06861 2.06% Castro::do_new_sources() 10 0.05547 0.06102 0.06686 2.01% Castro::reset_internal_energy() 63 0.04778 0.05016 0.05253 1.58% Castro::do_old_sources() 10 0.04 0.04581 0.04931 1.48% StateDataPhysBCFunct::() 41 0.03904 0.04294 0.04653 1.40% StateData::FillBoundary(geom) 41 0.03892 0.04281 0.04642 1.39% FabArray::ParallelCopy_nowait() 41 0.03385 0.04112 0.04369 1.31% Castro::normalize_species() 62 0.03273 0.03357 0.03484 1.05% Castro::construct_new_source() 50 0.02582 0.0298 0.03289 0.99% Gravity::interpolate_monopole_grav() 21 0.02767 0.02819 0.02888 0.87% Castro::construct_new_gravity_source() 10 0.02013 0.02347 0.02634 0.79% Castro::post_init() 1 0.02414 0.02437 0.02455 0.74% Amr::writePlotFile() 2 0.02401 0.02415 0.02433 0.73% Castro::apply_source_to_state() 20 0.01322 0.01476 0.01624 0.49% MultiFab::Saxpy() 20 0.01317 0.01471 0.01618 0.49% VisMF::Write(FabArray) 2 0.01233 0.01283 0.01527 0.46% Castro::post_timestep() 10 0.01385 0.0143 0.01479 0.44% Castro::check_for_nan() 20 0.01017 0.01119 0.01253 0.38% MultiFab::contains_nan() 20 0.01015 0.01116 0.01251 0.38% Castro::construct_old_source() 50 0.007283 0.01091 0.01179 0.35% Castro::construct_old_gravity_source() 10 0.007232 0.01084 0.01172 0.35% FabArray::setDomainBndry() 41 0.006838 0.01012 0.01159 0.35% Castro::computeNewDt() 9 0.006851 0.008007 0.008632 0.26% AmrLevel::AmrLevel(dm) 1 0.004364 0.004978 0.006451 0.19% StateData::define() 4 0.004353 0.004966 0.006435 0.19% Castro::enforce_min_density() 62 0.005756 0.006115 0.006382 0.19% Castro::swap_state_time_levels() 10 0.002437 0.003581 0.003752 0.11% Castro::post_regrid() 1 0.001385 0.001439 0.001507 0.05% Castro::finalize_do_advance() 10 0.0004587 0.0008274 0.0009531 0.03% Amr::InitAmr() 1 0.0002942 0.0003612 0.0004839 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.513e-05 0.0001457 0.0002186 0.01% DistributionMapping::LeastUsedCPUs() 1 8.57e-06 0.0001394 0.0002109 0.01% FabArrayBase::getCPC() 41 6.57e-05 8.414e-05 0.0001142 0.00% Castro::enforce_consistent_e() 1 8.004e-05 8.471e-05 8.915e-05 0.00% Castro::finalize_advance() 10 5.972e-05 6.14e-05 6.459e-05 0.00% Amr::writeSmallPlotFile() 1 2.494e-05 4.734e-05 6.023e-05 0.00% Castro::enforce_speed_limit() 62 2.715e-05 3.369e-05 4.268e-05 0.00% FabArrayBase::CPC::define() 2 2.333e-05 2.653e-05 3.568e-05 0.00% Castro::create_source_corrector() 10 1.482e-05 1.715e-05 1.964e-05 0.00% Gravity::swapTimeLevels() 10 1.03e-05 1.254e-05 1.614e-05 0.00% Amr::initSubcycle() 1 8.363e-06 1.049e-05 1.501e-05 0.00% Gravity::set_mass_offset() 10 7.017e-06 7.643e-06 9.021e-06 0.00% Castro::FluxRegFineAdd() 10 5.649e-06 6.591e-06 7.59e-06 0.00% Castro::retry_advance_ctu() 10 4.704e-06 5.928e-06 7.531e-06 0.00% DistributionMapping::Distribute() 1 8.71e-07 1.235e-06 1.509e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-12-g806f2373b68e) finalized