MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-13-g3c644cb0a46a) initialized Starting run at 05:36:54 UTC on 2022-03-16. Successfully read inputs file ... Castro git describe: 22.02-13-ga12efaab3 AMReX git describe: 22.03-13-g3c644cb0a Microphysics git describe: 22.03-6-g41c4af20 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01354933 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.334502742 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.325226572 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.315206129 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.314616991 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.31558089 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.341590756 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.297647975 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.291718544 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.295143693 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.28878732 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009442736 seconds Ending run at 05:36:57 UTC on 2022-03-16. Run time = 3.328961622 Run time without initialization = 3.132973566 Average number of zones advanced per microsecond: 0.837 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.328 ... 3.329 ... 3.329 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1195 2.1785 2.2201 66.69% Gravity::make_radial_gravity() 21 0.3371 0.3487 0.3668 11.02% Castro::initData() 1 0.03766 0.08068 0.1342 4.03% MultiFab::min() 10 0.02285 0.06837 0.133 3.99% Castro::estTimeStep() 21 0.01667 0.07543 0.1162 3.49% FabArray::setVal() 143 0.06605 0.07165 0.07667 2.30% FabArray::ParallelCopy_finish() 41 0.03523 0.04487 0.07106 2.13% Castro::reset_internal_energy() 63 0.04817 0.04952 0.05136 1.54% StateData::FillBoundary(geom) 41 0.03878 0.04183 0.04459 1.34% FabArray::ParallelCopy_nowait() 41 0.03296 0.04061 0.04329 1.30% FillPatchIterator::Initialize 41 0.02308 0.03087 0.03403 1.02% Castro::normalize_species() 62 0.03231 0.03295 0.03341 1.00% Gravity::interpolate_monopole_grav() 21 0.02743 0.02787 0.02855 0.86% Castro::construct_new_gravity_source() 10 0.02033 0.02351 0.02612 0.78% Castro::do_advance_ctu() 10 0.01421 0.01962 0.02405 0.72% Castro::expand_state() 10 0.01165 0.01916 0.02187 0.66% Castro::computeTemp() 63 0.0173 0.01868 0.01975 0.59% Castro::initialize_do_advance() 10 0.01052 0.01615 0.01792 0.54% MultiFab::Saxpy() 20 0.01308 0.01464 0.01585 0.48% VisMF::Write(FabArray) 2 0.01181 0.01256 0.015 0.45% Castro::initialize_advance() 10 0.01078 0.01256 0.01447 0.43% Gravity::get_new_grav_vector() 11 0.009503 0.01102 0.01328 0.40% MultiFab::contains_nan() 20 0.01007 0.011 0.0121 0.36% Amr::writePlotFile() 2 0.008234 0.01084 0.01164 0.35% FabArray::setDomainBndry() 41 0.006852 0.01006 0.0116 0.35% Castro::construct_old_gravity_source() 10 0.00699 0.01085 0.01154 0.35% Gravity::get_old_grav_vector() 10 0.00678 0.00916 0.01078 0.32% Amr::defBaseLevel() 1 0.00652 0.008061 0.009423 0.28% StateData::define() 4 0.004282 0.005498 0.007002 0.21% Castro::construct_new_source() 50 0.005745 0.00637 0.006622 0.20% Castro::enforce_min_density() 62 0.005675 0.00611 0.006477 0.19% Castro::swap_state_time_levels() 10 0.002775 0.003548 0.004056 0.12% main() 1 0.003103 0.003637 0.004018 0.12% Amr::coarseTimeStep() 10 0.0003226 0.0006757 0.001217 0.04% Castro::finalize_do_advance() 10 0.0004654 0.0008316 0.0009429 0.03% Amr::InitAmr() 1 0.0002699 0.0003989 0.0006668 0.02% DistributionMapping::LeastUsedCPUs() 1 9.091e-06 0.0003353 0.000488 0.01% Amr::timeStep() 10 0.0001693 0.0002248 0.0004742 0.01% Castro::clean_state() 62 0.0001385 0.000152 0.0001831 0.01% StateDataPhysBCFunct::() 41 0.0001157 0.0001245 0.0001335 0.00% Castro::enforce_consistent_e() 1 7.716e-05 8.842e-05 0.0001005 0.00% Castro::construct_old_source() 50 6.206e-05 8.054e-05 9.647e-05 0.00% FillPatchSingleLevel 41 6.037e-05 6.888e-05 8.181e-05 0.00% FabArray::ParallelCopy() 41 6.278e-05 7.041e-05 7.945e-05 0.00% Amr::writeSmallPlotFile() 1 2.63e-05 5.186e-05 7.364e-05 0.00% Castro::do_new_sources() 10 5.925e-05 6.457e-05 6.844e-05 0.00% Amr::FinalizeInit() 1 4.168e-06 1.271e-05 6.672e-05 0.00% Castro::construct_old_gravity() 10 5.054e-05 5.715e-05 6.67e-05 0.00% FabArrayBase::getCPC() 41 5.185e-05 5.755e-05 6.485e-05 0.00% Castro::subcycle_advance_ctu() 10 4.442e-05 5.145e-05 6.294e-05 0.00% Castro::do_old_sources() 10 5.42e-05 5.826e-05 6.261e-05 0.00% Castro::finalize_advance() 10 5.249e-05 5.676e-05 6.123e-05 0.00% Castro::construct_new_gravity() 10 3.949e-05 4.762e-05 6.056e-05 0.00% Castro::advance() 10 3.616e-05 4.247e-05 5.485e-05 0.00% Castro::apply_source_to_state() 20 4.142e-05 4.85e-05 5.378e-05 0.00% Castro::enforce_speed_limit() 62 2.952e-05 3.459e-05 5.21e-05 0.00% FabArrayBase::CPC::define() 2 2.161e-05 2.547e-05 2.98e-05 0.00% Castro::check_for_nan() 20 2.115e-05 2.483e-05 2.785e-05 0.00% Castro::create_source_corrector() 10 1.406e-05 1.668e-05 2.171e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.902e-06 1.055e-05 1.82e-05 0.00% Amr::initSubcycle() 1 8.551e-06 1.36e-05 1.811e-05 0.00% Gravity::swapTimeLevels() 10 1.185e-05 1.442e-05 1.805e-05 0.00% Castro::post_timestep() 10 7.598e-06 9.186e-06 1.029e-05 0.00% Castro::post_init() 1 2.984e-06 4.454e-06 1.026e-05 0.00% Castro::FluxRegFineAdd() 10 5.285e-06 6.506e-06 9.854e-06 0.00% Amr::InitializeInit() 1 2.125e-06 3.328e-06 9.007e-06 0.00% Gravity::set_mass_offset() 10 6.454e-06 7.398e-06 8.751e-06 0.00% Castro::computeNewDt() 9 6.886e-06 7.639e-06 8.045e-06 0.00% Castro::retry_advance_ctu() 10 5.057e-06 5.853e-06 6.935e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.002e-06 4.826e-06 6.21e-06 0.00% Castro::computeInitialDt() 2 2.784e-06 3.921e-06 4.928e-06 0.00% Castro::post_regrid() 1 2.063e-06 3.576e-06 4.403e-06 0.00% Amr::init() 1 1.858e-06 2.255e-06 2.672e-06 0.00% Amr::initialInit() 1 1.322e-06 1.636e-06 1.916e-06 0.00% DistributionMapping::Distribute() 1 1.01e-06 1.298e-06 1.681e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.328 3.329 3.329 100.00% Amr::coarseTimeStep() 10 3.12 3.12 3.12 93.71% Amr::timeStep() 10 3.11 3.111 3.111 93.46% Castro::advance() 10 3.096 3.096 3.096 93.00% Castro::subcycle_advance_ctu() 10 3.018 3.021 3.024 90.82% Castro::do_advance_ctu() 10 3.018 3.021 3.023 90.82% Castro::construct_ctu_hydro_source() 10 2.12 2.178 2.22 66.69% Gravity::make_radial_gravity() 21 0.3371 0.3487 0.3668 11.02% Gravity::get_new_grav_vector() 11 0.2254 0.2274 0.2284 6.86% Castro::construct_old_gravity() 10 0.2 0.2074 0.2218 6.66% Gravity::get_old_grav_vector() 10 0.1991 0.2066 0.2212 6.64% Castro::construct_new_gravity() 10 0.1998 0.2012 0.202 6.07% Amr::init() 1 0.1951 0.1954 0.1956 5.87% Amr::initialInit() 1 0.1814 0.1815 0.1818 5.46% FillPatchIterator::Initialize 41 0.1555 0.1686 0.175 5.26% Castro::initialize_do_advance() 10 0.1439 0.1553 0.162 4.87% Amr::InitializeInit() 1 0.05453 0.1001 0.1522 4.57% Amr::defBaseLevel() 1 0.05453 0.1001 0.1522 4.57% FillPatchSingleLevel 41 0.1219 0.1277 0.1451 4.36% Castro::initData() 1 0.04119 0.08429 0.138 4.14% MultiFab::min() 10 0.02285 0.06837 0.133 3.99% Amr::FinalizeInit() 1 0.02956 0.08148 0.127 3.81% Castro::expand_state() 10 0.1002 0.1109 0.1165 3.50% Castro::estTimeStep() 21 0.01667 0.07543 0.1162 3.49% Castro::clean_state() 62 0.1043 0.1065 0.1097 3.29% FabArray::ParallelCopy() 41 0.07848 0.08563 0.1042 3.13% Castro::computeInitialDt() 2 0.001756 0.05379 0.09948 2.99% Castro::initialize_advance() 10 0.07236 0.07471 0.07816 2.35% FabArray::setVal() 143 0.06605 0.07165 0.07667 2.30% Castro::computeTemp() 63 0.06623 0.0682 0.07111 2.14% FabArray::ParallelCopy_finish() 41 0.03523 0.04487 0.07106 2.13% Castro::do_new_sources() 10 0.05595 0.06112 0.06626 1.99% Castro::reset_internal_energy() 63 0.04817 0.04952 0.05136 1.54% Castro::do_old_sources() 10 0.03915 0.04549 0.0469 1.41% StateDataPhysBCFunct::() 41 0.03889 0.04195 0.04471 1.34% StateData::FillBoundary(geom) 41 0.03878 0.04183 0.04459 1.34% FabArray::ParallelCopy_nowait() 41 0.03306 0.04069 0.04336 1.30% Castro::normalize_species() 62 0.03231 0.03295 0.03341 1.00% Castro::construct_new_source() 50 0.02607 0.02988 0.03274 0.98% Gravity::interpolate_monopole_grav() 21 0.02743 0.02787 0.02855 0.86% Castro::post_init() 1 0.02698 0.02713 0.02728 0.82% Castro::construct_new_gravity_source() 10 0.02033 0.02351 0.02612 0.78% Amr::writePlotFile() 2 0.02323 0.02341 0.02359 0.71% Castro::apply_source_to_state() 20 0.01313 0.01469 0.01589 0.48% MultiFab::Saxpy() 20 0.01308 0.01464 0.01585 0.48% Castro::post_timestep() 10 0.01375 0.0144 0.01506 0.45% VisMF::Write(FabArray) 2 0.01181 0.01256 0.015 0.45% Castro::check_for_nan() 20 0.01009 0.01103 0.01213 0.36% MultiFab::contains_nan() 20 0.01007 0.011 0.0121 0.36% Castro::construct_old_source() 50 0.007052 0.01093 0.01163 0.35% FabArray::setDomainBndry() 41 0.006852 0.01006 0.0116 0.35% Castro::construct_old_gravity_source() 10 0.00699 0.01085 0.01154 0.35% Castro::computeNewDt() 9 0.006867 0.007458 0.007984 0.24% AmrLevel::AmrLevel(dm) 1 0.00429 0.005509 0.007013 0.21% StateData::define() 4 0.004282 0.005498 0.007002 0.21% Castro::enforce_min_density() 62 0.005675 0.00611 0.006477 0.19% Castro::swap_state_time_levels() 10 0.002775 0.003548 0.004056 0.12% Castro::post_regrid() 1 0.001384 0.001482 0.001673 0.05% Castro::finalize_do_advance() 10 0.0004654 0.0008316 0.0009429 0.03% Amr::InitAmr() 1 0.0002788 0.0004125 0.0006843 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.528e-05 0.0003414 0.0004946 0.01% DistributionMapping::LeastUsedCPUs() 1 9.091e-06 0.0003353 0.000488 0.01% Castro::enforce_consistent_e() 1 7.716e-05 8.842e-05 0.0001005 0.00% FabArrayBase::getCPC() 41 7.419e-05 8.302e-05 9.466e-05 0.00% Amr::writeSmallPlotFile() 1 2.63e-05 5.186e-05 7.364e-05 0.00% Castro::finalize_advance() 10 5.889e-05 6.326e-05 6.806e-05 0.00% Castro::enforce_speed_limit() 62 2.952e-05 3.459e-05 5.21e-05 0.00% FabArrayBase::CPC::define() 2 2.161e-05 2.547e-05 2.98e-05 0.00% Castro::create_source_corrector() 10 1.406e-05 1.668e-05 2.171e-05 0.00% Amr::initSubcycle() 1 8.551e-06 1.36e-05 1.811e-05 0.00% Gravity::swapTimeLevels() 10 1.185e-05 1.442e-05 1.805e-05 0.00% Castro::FluxRegFineAdd() 10 5.285e-06 6.506e-06 9.854e-06 0.00% Gravity::set_mass_offset() 10 6.454e-06 7.398e-06 8.751e-06 0.00% Castro::retry_advance_ctu() 10 5.057e-06 5.853e-06 6.935e-06 0.00% DistributionMapping::Distribute() 1 1.01e-06 1.298e-06 1.681e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-13-g3c644cb0a46a) finalized