MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-17-g7b4d10daf9c4) initialized Starting run at 05:36:54 UTC on 2022-03-21. Successfully read inputs file ... Castro git describe: 22.02-13-ga12efaab3 AMReX git describe: 22.03-17-g7b4d10daf Microphysics git describe: 22.03-8-g75721f58 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012810566 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.337657842 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.3322603 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.336447233 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.314244028 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.314118886 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.342825194 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.29786178 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.291779689 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.291525046 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.29184472 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009311271 seconds Ending run at 05:36:58 UTC on 2022-03-21. Run time = 3.3377566 Run time without initialization = 3.164102833 Average number of zones advanced per microsecond: 0.828 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.337 ... 3.338 ... 3.338 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1010 2.1970 2.2537 67.52% Gravity::make_radial_gravity() 21 0.3412 0.3496 0.3611 10.82% MultiFab::min() 10 0.0117 0.07045 0.1698 5.09% Castro::initData() 1 0.03772 0.07826 0.1154 3.46% Castro::estTimeStep() 21 0.01753 0.05885 0.1035 3.10% FabArray::setVal() 143 0.06897 0.0721 0.07672 2.30% FabArray::ParallelCopy_finish() 41 0.03231 0.04129 0.05941 1.78% Castro::reset_internal_energy() 63 0.04859 0.05015 0.05224 1.57% StateData::FillBoundary(geom) 41 0.03836 0.04224 0.04427 1.33% FabArray::ParallelCopy_nowait() 41 0.03899 0.04207 0.04336 1.30% FillPatchIterator::Initialize 41 0.02377 0.03123 0.03444 1.03% Castro::normalize_species() 62 0.03261 0.03325 0.03402 1.02% Gravity::interpolate_monopole_grav() 21 0.02753 0.02802 0.0287 0.86% Castro::construct_new_gravity_source() 10 0.02227 0.02449 0.02632 0.79% Castro::do_advance_ctu() 10 0.01869 0.02121 0.02396 0.72% Castro::expand_state() 10 0.01396 0.01969 0.0225 0.67% Castro::computeTemp() 63 0.0187 0.01901 0.01988 0.60% Castro::initialize_do_advance() 10 0.01325 0.01649 0.0176 0.53% MultiFab::Saxpy() 20 0.01484 0.01597 0.0166 0.50% Castro::initialize_advance() 10 0.01057 0.01247 0.0148 0.44% VisMF::Write(FabArray) 2 0.01119 0.01179 0.01402 0.42% Gravity::get_new_grav_vector() 11 0.01037 0.01142 0.01314 0.39% Castro::construct_old_gravity_source() 10 0.01003 0.0115 0.01246 0.37% FabArray::setDomainBndry() 41 0.007112 0.01059 0.01213 0.36% MultiFab::contains_nan() 20 0.01048 0.01145 0.01208 0.36% Amr::writePlotFile() 2 0.008323 0.01068 0.01153 0.35% Amr::defBaseLevel() 1 0.006498 0.007704 0.01072 0.32% Gravity::get_old_grav_vector() 10 0.008114 0.009349 0.01051 0.31% Castro::construct_new_source() 50 0.006453 0.006689 0.00693 0.21% Castro::enforce_min_density() 62 0.005888 0.006162 0.006561 0.20% StateData::define() 4 0.004259 0.004966 0.006271 0.19% main() 1 0.00366 0.004033 0.004229 0.13% Castro::swap_state_time_levels() 10 0.002911 0.003727 0.003886 0.12% Castro::finalize_do_advance() 10 0.0009045 0.001124 0.001226 0.04% Amr::coarseTimeStep() 10 0.0003373 0.0005391 0.001021 0.03% Amr::InitAmr() 1 0.0002978 0.0003514 0.0004581 0.01% Amr::timeStep() 10 0.000184 0.0002295 0.0004517 0.01% DistributionMapping::LeastUsedCPUs() 1 9.276e-06 0.0001387 0.0002057 0.01% Castro::clean_state() 62 0.0001236 0.0001419 0.0001597 0.00% StateDataPhysBCFunct::() 41 0.0001157 0.0001242 0.0001354 0.00% Amr::FinalizeInit() 1 4.391e-06 1.627e-05 9.303e-05 0.00% Castro::construct_old_source() 50 5.806e-05 7.515e-05 8.977e-05 0.00% Castro::enforce_consistent_e() 1 7.61e-05 8.394e-05 8.935e-05 0.00% FabArray::ParallelCopy() 41 6.043e-05 6.71e-05 7.328e-05 0.00% FabArrayBase::getCPC() 41 4.189e-05 5.058e-05 7.214e-05 0.00% Amr::writeSmallPlotFile() 1 2.596e-05 4.812e-05 7e-05 0.00% FillPatchSingleLevel 41 5.402e-05 6.177e-05 6.998e-05 0.00% Castro::subcycle_advance_ctu() 10 3.936e-05 4.994e-05 6.987e-05 0.00% Castro::advance() 10 3.311e-05 4.445e-05 6.774e-05 0.00% Castro::do_new_sources() 10 4.801e-05 5.952e-05 6.678e-05 0.00% Castro::do_old_sources() 10 5.139e-05 5.911e-05 6.58e-05 0.00% Castro::construct_old_gravity() 10 4.905e-05 5.42e-05 6.303e-05 0.00% Castro::finalize_advance() 10 5.097e-05 5.355e-05 5.624e-05 0.00% Castro::apply_source_to_state() 20 3.556e-05 4.553e-05 5.558e-05 0.00% Castro::construct_new_gravity() 10 4.029e-05 4.276e-05 4.576e-05 0.00% Castro::enforce_speed_limit() 62 2.903e-05 3.282e-05 3.645e-05 0.00% FabArrayBase::CPC::define() 2 2.375e-05 2.765e-05 3.534e-05 0.00% Castro::check_for_nan() 20 2.133e-05 2.449e-05 2.661e-05 0.00% Castro::create_source_corrector() 10 1.397e-05 1.687e-05 1.889e-05 0.00% Gravity::swapTimeLevels() 10 1.064e-05 1.314e-05 1.775e-05 0.00% Amr::initSubcycle() 1 8.601e-06 1.084e-05 1.55e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.767e-06 1.071e-05 1.496e-05 0.00% Castro::post_init() 1 3.55e-06 4.985e-06 1.069e-05 0.00% Castro::post_timestep() 10 7.836e-06 9.383e-06 1.014e-05 0.00% Gravity::set_mass_offset() 10 6.632e-06 7.889e-06 9.019e-06 0.00% Castro::computeNewDt() 9 7.027e-06 7.581e-06 8.451e-06 0.00% Amr::InitializeInit() 1 2.127e-06 3.145e-06 7.03e-06 0.00% Castro::retry_advance_ctu() 10 5.065e-06 6.375e-06 7.013e-06 0.00% Castro::FluxRegFineAdd() 10 5.132e-06 6.137e-06 6.91e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.87e-06 4.777e-06 6.169e-06 0.00% Castro::post_regrid() 1 2.145e-06 3.541e-06 5.507e-06 0.00% Castro::computeInitialDt() 2 3.208e-06 4.042e-06 4.695e-06 0.00% Amr::init() 1 2.116e-06 2.299e-06 2.705e-06 0.00% Amr::initialInit() 1 1.296e-06 1.631e-06 2.238e-06 0.00% DistributionMapping::Distribute() 1 1.041e-06 1.288e-06 1.727e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.337 3.338 3.338 100.00% Amr::coarseTimeStep() 10 3.151 3.151 3.151 94.39% Amr::timeStep() 10 3.142 3.142 3.142 94.14% Castro::advance() 10 3.127 3.127 3.127 93.70% Castro::subcycle_advance_ctu() 10 3.05 3.053 3.055 91.53% Castro::do_advance_ctu() 10 3.05 3.053 3.055 91.53% Castro::construct_ctu_hydro_source() 10 2.101 2.197 2.254 67.52% Gravity::make_radial_gravity() 21 0.3412 0.3496 0.3611 10.82% Gravity::get_new_grav_vector() 11 0.2274 0.2289 0.2305 6.91% Castro::construct_old_gravity() 10 0.2022 0.2077 0.2171 6.50% Gravity::get_old_grav_vector() 10 0.2013 0.2069 0.2163 6.48% Castro::construct_new_gravity() 10 0.2047 0.2056 0.2066 6.19% Amr::init() 1 0.173 0.1731 0.1732 5.19% FillPatchIterator::Initialize 41 0.1621 0.1678 0.1732 5.19% MultiFab::min() 10 0.0117 0.07045 0.1698 5.09% Castro::initialize_do_advance() 10 0.148 0.1567 0.1627 4.88% Amr::initialInit() 1 0.1598 0.1601 0.1602 4.80% FillPatchSingleLevel 41 0.1177 0.1259 0.1371 4.11% Amr::InitializeInit() 1 0.05547 0.09656 0.1336 4.00% Amr::defBaseLevel() 1 0.05546 0.09656 0.1336 4.00% Castro::initData() 1 0.04119 0.08184 0.119 3.57% Castro::expand_state() 10 0.107 0.1115 0.1174 3.52% Castro::clean_state() 62 0.1051 0.1078 0.1111 3.33% Amr::FinalizeInit() 1 0.02628 0.06349 0.1047 3.14% Castro::estTimeStep() 21 0.01753 0.05885 0.1035 3.10% FabArray::ParallelCopy() 41 0.07477 0.0835 0.09857 2.95% Castro::computeInitialDt() 2 0.001692 0.03866 0.07982 2.39% Castro::initialize_advance() 10 0.07179 0.07413 0.07756 2.32% FabArray::setVal() 143 0.06897 0.0721 0.07672 2.30% Castro::computeTemp() 63 0.06729 0.06916 0.07212 2.16% Castro::do_new_sources() 10 0.0602 0.06397 0.06816 2.04% FabArray::ParallelCopy_finish() 41 0.03231 0.04129 0.05941 1.78% Castro::reset_internal_energy() 63 0.04859 0.05015 0.05224 1.57% Castro::do_old_sources() 10 0.0459 0.04749 0.04858 1.46% StateDataPhysBCFunct::() 41 0.03849 0.04237 0.0444 1.33% StateData::FillBoundary(geom) 41 0.03836 0.04224 0.04427 1.33% FabArray::ParallelCopy_nowait() 41 0.03909 0.04215 0.04343 1.30% Castro::normalize_species() 62 0.03261 0.03325 0.03402 1.02% Castro::construct_new_source() 50 0.0289 0.03117 0.03325 1.00% Gravity::interpolate_monopole_grav() 21 0.02753 0.02802 0.0287 0.86% Castro::construct_new_gravity_source() 10 0.02227 0.02449 0.02632 0.79% Castro::post_init() 1 0.02405 0.02427 0.02442 0.73% Amr::writePlotFile() 2 0.02234 0.02247 0.02271 0.68% Castro::apply_source_to_state() 20 0.01488 0.01602 0.01665 0.50% MultiFab::Saxpy() 20 0.01484 0.01597 0.0166 0.50% Castro::post_timestep() 10 0.01407 0.01437 0.01469 0.44% VisMF::Write(FabArray) 2 0.01119 0.01179 0.01402 0.42% Castro::construct_old_source() 50 0.01008 0.01158 0.01254 0.38% Castro::construct_old_gravity_source() 10 0.01003 0.0115 0.01246 0.37% FabArray::setDomainBndry() 41 0.007112 0.01059 0.01213 0.36% Castro::check_for_nan() 20 0.01051 0.01147 0.0121 0.36% MultiFab::contains_nan() 20 0.01048 0.01145 0.01208 0.36% Castro::computeNewDt() 9 0.006816 0.00727 0.007598 0.23% Castro::enforce_min_density() 62 0.005888 0.006162 0.006561 0.20% AmrLevel::AmrLevel(dm) 1 0.004268 0.004977 0.006286 0.19% StateData::define() 4 0.004259 0.004966 0.006271 0.19% Castro::swap_state_time_levels() 10 0.002911 0.003727 0.003886 0.12% Castro::post_regrid() 1 0.0014 0.001454 0.001507 0.05% Castro::finalize_do_advance() 10 0.0009045 0.001124 0.001226 0.04% Amr::InitAmr() 1 0.000307 0.0003623 0.0004736 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.558e-05 0.0001447 0.0002136 0.01% DistributionMapping::LeastUsedCPUs() 1 9.276e-06 0.0001387 0.0002057 0.01% FabArrayBase::getCPC() 41 6.849e-05 7.822e-05 9.996e-05 0.00% Castro::enforce_consistent_e() 1 7.61e-05 8.394e-05 8.935e-05 0.00% Amr::writeSmallPlotFile() 1 2.596e-05 4.812e-05 7e-05 0.00% Castro::finalize_advance() 10 5.673e-05 5.969e-05 6.28e-05 0.00% Castro::enforce_speed_limit() 62 2.903e-05 3.282e-05 3.645e-05 0.00% FabArrayBase::CPC::define() 2 2.375e-05 2.765e-05 3.534e-05 0.00% Castro::create_source_corrector() 10 1.397e-05 1.687e-05 1.889e-05 0.00% Gravity::swapTimeLevels() 10 1.064e-05 1.314e-05 1.775e-05 0.00% Amr::initSubcycle() 1 8.601e-06 1.084e-05 1.55e-05 0.00% Gravity::set_mass_offset() 10 6.632e-06 7.889e-06 9.019e-06 0.00% Castro::retry_advance_ctu() 10 5.065e-06 6.375e-06 7.013e-06 0.00% Castro::FluxRegFineAdd() 10 5.132e-06 6.137e-06 6.91e-06 0.00% DistributionMapping::Distribute() 1 1.041e-06 1.288e-06 1.727e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-17-g7b4d10daf9c4) finalized