MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-21-g336ca7002b45) initialized Starting run at 05:36:53 UTC on 2022-03-22. Successfully read inputs file ... Castro git describe: 22.02-13-ga12efaab3 AMReX git describe: 22.03-21-g336ca7002 Microphysics git describe: 22.03-8-g75721f58 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012229942 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.334059912 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.334096858 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.306030086 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.308417428 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.309198242 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.335650203 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.296263641 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.292703913 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.291370287 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.289010521 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009702958 seconds Ending run at 05:36:57 UTC on 2022-03-22. Run time = 3.3151487 Run time without initialization = 3.110348489 Average number of zones advanced per microsecond: 0.843 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.314 ... 3.315 ... 3.315 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1252 2.1578 2.2247 67.11% Gravity::make_radial_gravity() 21 0.338 0.3475 0.3641 10.98% Castro::initData() 1 0.04544 0.08527 0.1436 4.33% Castro::estTimeStep() 21 0.02968 0.08542 0.1277 3.85% MultiFab::min() 10 0.01001 0.08093 0.1152 3.47% FabArray::ParallelCopy_finish() 41 0.03228 0.04216 0.08316 2.51% FabArray::setVal() 143 0.05203 0.06712 0.07299 2.20% Castro::reset_internal_energy() 63 0.04897 0.04996 0.05125 1.55% StateData::FillBoundary(geom) 41 0.03841 0.04115 0.04315 1.30% FabArray::ParallelCopy_nowait() 41 0.03326 0.03929 0.04091 1.23% Castro::normalize_species() 62 0.03265 0.03309 0.0336 1.01% FillPatchIterator::Initialize 41 0.02244 0.02811 0.03131 0.94% Gravity::interpolate_monopole_grav() 21 0.02747 0.02789 0.02825 0.85% Castro::construct_new_gravity_source() 10 0.02046 0.02347 0.02578 0.78% Castro::do_advance_ctu() 10 0.01471 0.0196 0.02281 0.69% Castro::expand_state() 10 0.01164 0.01824 0.02063 0.62% Castro::computeTemp() 63 0.01784 0.01885 0.0193 0.58% Castro::initialize_do_advance() 10 0.01012 0.01523 0.01669 0.50% MultiFab::Saxpy() 20 0.01321 0.01468 0.01546 0.47% VisMF::Write(FabArray) 2 0.01144 0.01213 0.01425 0.43% Castro::initialize_advance() 10 0.003847 0.01036 0.0131 0.40% Gravity::get_new_grav_vector() 11 0.00905 0.01053 0.01237 0.37% MultiFab::contains_nan() 20 0.01021 0.01114 0.0121 0.36% Castro::construct_old_gravity_source() 10 0.007241 0.01084 0.01163 0.35% FabArray::setDomainBndry() 41 0.006506 0.009343 0.01111 0.34% Amr::writePlotFile() 2 0.0079 0.01008 0.01108 0.33% Gravity::get_old_grav_vector() 10 0.006737 0.00868 0.01005 0.30% Amr::defBaseLevel() 1 0.006422 0.007555 0.009767 0.29% Castro::construct_new_source() 50 0.005839 0.006456 0.006786 0.20% Castro::enforce_min_density() 62 0.005707 0.006165 0.006715 0.20% StateData::define() 4 0.004218 0.004921 0.006183 0.19% main() 1 0.003267 0.003766 0.004124 0.12% Castro::swap_state_time_levels() 10 0.002454 0.003431 0.003722 0.11% Castro::finalize_do_advance() 10 0.0004594 0.0009085 0.001057 0.03% Amr::coarseTimeStep() 10 0.0002974 0.0006165 0.0009157 0.03% Amr::InitAmr() 1 0.0002848 0.0003501 0.0005881 0.02% Amr::timeStep() 10 0.0001576 0.0002208 0.0004377 0.01% DistributionMapping::LeastUsedCPUs() 1 1.007e-05 0.0002816 0.0003588 0.01% Castro::clean_state() 62 0.0001289 0.0001521 0.0001759 0.01% StateDataPhysBCFunct::() 41 0.0001201 0.0001341 0.0001515 0.00% Castro::enforce_consistent_e() 1 8.341e-05 9.716e-05 0.0001447 0.00% Castro::construct_old_source() 50 6.627e-05 8.171e-05 0.0001036 0.00% FabArray::ParallelCopy() 41 6.149e-05 6.699e-05 8.132e-05 0.00% FabArrayBase::getCPC() 41 4.755e-05 5.919e-05 7.939e-05 0.00% FillPatchSingleLevel 41 5.717e-05 6.623e-05 7.5e-05 0.00% Castro::do_old_sources() 10 5.288e-05 6.398e-05 7.402e-05 0.00% Amr::writeSmallPlotFile() 1 2.543e-05 5.35e-05 7.351e-05 0.00% Amr::FinalizeInit() 1 3.547e-06 1.28e-05 7.312e-05 0.00% Castro::construct_old_gravity() 10 5.096e-05 5.809e-05 7.262e-05 0.00% Castro::do_new_sources() 10 5.812e-05 6.192e-05 6.896e-05 0.00% Castro::subcycle_advance_ctu() 10 5.111e-05 5.807e-05 6.471e-05 0.00% Castro::apply_source_to_state() 20 4.313e-05 5.032e-05 6.203e-05 0.00% Castro::construct_new_gravity() 10 3.742e-05 4.75e-05 5.819e-05 0.00% Castro::finalize_advance() 10 4.992e-05 5.349e-05 5.68e-05 0.00% Castro::advance() 10 3.463e-05 4.012e-05 4.527e-05 0.00% Castro::enforce_speed_limit() 62 2.996e-05 3.529e-05 4.415e-05 0.00% FabArrayBase::CPC::define() 2 2.223e-05 2.702e-05 3.668e-05 0.00% Castro::check_for_nan() 20 2.259e-05 2.508e-05 3.111e-05 0.00% Castro::create_source_corrector() 10 1.399e-05 1.735e-05 2.029e-05 0.00% Gravity::swapTimeLevels() 10 1.12e-05 1.439e-05 1.681e-05 0.00% Amr::initSubcycle() 1 8.54e-06 1.076e-05 1.56e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.885e-06 8.989e-06 1.149e-05 0.00% Castro::post_timestep() 10 8.016e-06 9.305e-06 1.053e-05 0.00% Castro::post_init() 1 3.044e-06 4.94e-06 9.526e-06 0.00% Gravity::set_mass_offset() 10 7.178e-06 7.987e-06 9.341e-06 0.00% Amr::InitializeInit() 1 2.147e-06 3.212e-06 8.932e-06 0.00% Castro::computeNewDt() 9 6.763e-06 7.788e-06 8.578e-06 0.00% Castro::FluxRegFineAdd() 10 5.489e-06 6.978e-06 8.28e-06 0.00% Castro::retry_advance_ctu() 10 5.057e-06 5.882e-06 7.184e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.939e-06 4.421e-06 5.4e-06 0.00% Castro::computeInitialDt() 2 2.852e-06 3.347e-06 4.071e-06 0.00% Castro::post_regrid() 1 1.845e-06 2.379e-06 3.372e-06 0.00% Amr::init() 1 1.509e-06 2.099e-06 2.954e-06 0.00% Amr::initialInit() 1 1.252e-06 1.686e-06 2.285e-06 0.00% DistributionMapping::Distribute() 1 1.021e-06 1.239e-06 1.72e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.314 3.315 3.315 100.00% Amr::coarseTimeStep() 10 3.097 3.097 3.097 93.41% Amr::timeStep() 10 3.087 3.087 3.088 93.14% Castro::advance() 10 3.072 3.073 3.073 92.69% Castro::subcycle_advance_ctu() 10 3 3.004 3.022 91.16% Castro::do_advance_ctu() 10 3 3.004 3.022 91.16% Castro::construct_ctu_hydro_source() 10 2.125 2.158 2.225 67.11% Gravity::make_radial_gravity() 21 0.338 0.3475 0.3641 10.98% Gravity::get_new_grav_vector() 11 0.2247 0.226 0.2269 6.85% Castro::construct_old_gravity() 10 0.1987 0.2047 0.2187 6.60% Gravity::get_old_grav_vector() 10 0.1979 0.204 0.2181 6.58% Amr::init() 1 0.204 0.2043 0.2044 6.16% Castro::construct_new_gravity() 10 0.2012 0.2024 0.2031 6.13% Amr::initialInit() 1 0.1914 0.1919 0.1921 5.80% FillPatchIterator::Initialize 41 0.1511 0.1604 0.1842 5.56% Amr::InitializeInit() 1 0.0641 0.104 0.165 4.98% Amr::defBaseLevel() 1 0.06409 0.104 0.165 4.98% Castro::initialize_do_advance() 10 0.1434 0.1499 0.1565 4.72% FillPatchSingleLevel 41 0.1162 0.123 0.1553 4.68% Castro::initData() 1 0.04941 0.0892 0.1472 4.44% Amr::FinalizeInit() 1 0.0264 0.0879 0.1279 3.86% Castro::estTimeStep() 21 0.02968 0.08542 0.1277 3.85% Castro::expand_state() 10 0.09957 0.1065 0.119 3.59% FabArray::ParallelCopy() 41 0.07299 0.0816 0.1166 3.52% MultiFab::min() 10 0.01001 0.08093 0.1152 3.47% Castro::clean_state() 62 0.1057 0.1072 0.1095 3.30% Castro::computeInitialDt() 2 0.001837 0.06303 0.1029 3.11% FabArray::ParallelCopy_finish() 41 0.03228 0.04216 0.08316 2.51% FabArray::setVal() 143 0.05203 0.06712 0.07299 2.20% Castro::initialize_advance() 10 0.04991 0.06814 0.07278 2.20% Castro::computeTemp() 63 0.06681 0.06881 0.07055 2.13% Castro::do_new_sources() 10 0.05667 0.0615 0.06719 2.03% Castro::reset_internal_energy() 63 0.04897 0.04996 0.05125 1.55% Castro::do_old_sources() 10 0.03974 0.04546 0.04683 1.41% StateDataPhysBCFunct::() 41 0.03856 0.04129 0.04327 1.31% StateData::FillBoundary(geom) 41 0.03841 0.04115 0.04315 1.30% FabArray::ParallelCopy_nowait() 41 0.03338 0.03937 0.04101 1.24% Castro::normalize_species() 62 0.03265 0.03309 0.0336 1.01% Castro::construct_new_source() 50 0.0263 0.02993 0.03257 0.98% Gravity::interpolate_monopole_grav() 21 0.02747 0.02789 0.02825 0.85% Castro::construct_new_gravity_source() 10 0.02046 0.02347 0.02578 0.78% Castro::post_init() 1 0.02436 0.02461 0.02481 0.75% Amr::writePlotFile() 2 0.02203 0.02221 0.02252 0.68% Castro::apply_source_to_state() 20 0.01327 0.01473 0.0155 0.47% MultiFab::Saxpy() 20 0.01321 0.01468 0.01546 0.47% Castro::post_timestep() 10 0.01378 0.01449 0.01488 0.45% VisMF::Write(FabArray) 2 0.01144 0.01213 0.01425 0.43% Castro::check_for_nan() 20 0.01024 0.01116 0.01212 0.37% MultiFab::contains_nan() 20 0.01021 0.01114 0.0121 0.36% Castro::construct_old_source() 50 0.007307 0.01092 0.01172 0.35% Castro::construct_old_gravity_source() 10 0.007241 0.01084 0.01163 0.35% FabArray::setDomainBndry() 41 0.006506 0.009343 0.01111 0.34% Castro::computeNewDt() 9 0.006806 0.007368 0.008196 0.25% Castro::enforce_min_density() 62 0.005707 0.006165 0.006715 0.20% AmrLevel::AmrLevel(dm) 1 0.004225 0.00493 0.006193 0.19% StateData::define() 4 0.004218 0.004921 0.006183 0.19% Castro::swap_state_time_levels() 10 0.002454 0.003431 0.003722 0.11% Castro::post_regrid() 1 0.001281 0.001453 0.00175 0.05% Castro::finalize_do_advance() 10 0.0004594 0.0009085 0.001057 0.03% Amr::InitAmr() 1 0.0002936 0.0003608 0.0006031 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.613e-05 0.0002873 0.0003654 0.01% DistributionMapping::LeastUsedCPUs() 1 1.007e-05 0.0002816 0.0003588 0.01% Castro::enforce_consistent_e() 1 8.341e-05 9.716e-05 0.0001447 0.00% FabArrayBase::getCPC() 41 7.059e-05 8.621e-05 0.0001161 0.00% Amr::writeSmallPlotFile() 1 2.543e-05 5.35e-05 7.351e-05 0.00% Castro::finalize_advance() 10 5.541e-05 6.047e-05 6.377e-05 0.00% Castro::enforce_speed_limit() 62 2.996e-05 3.529e-05 4.415e-05 0.00% FabArrayBase::CPC::define() 2 2.223e-05 2.702e-05 3.668e-05 0.00% Castro::create_source_corrector() 10 1.399e-05 1.735e-05 2.029e-05 0.00% Gravity::swapTimeLevels() 10 1.12e-05 1.439e-05 1.681e-05 0.00% Amr::initSubcycle() 1 8.54e-06 1.076e-05 1.56e-05 0.00% Gravity::set_mass_offset() 10 7.178e-06 7.987e-06 9.341e-06 0.00% Castro::FluxRegFineAdd() 10 5.489e-06 6.978e-06 8.28e-06 0.00% Castro::retry_advance_ctu() 10 5.057e-06 5.882e-06 7.184e-06 0.00% DistributionMapping::Distribute() 1 1.021e-06 1.239e-06 1.72e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-21-g336ca7002b45) finalized