MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-25-gee651cd5b301) initialized Starting run at 05:36:46 UTC on 2022-03-23. Successfully read inputs file ... Castro git describe: 22.02-14-g23fc313a7 AMReX git describe: 22.03-25-gee651cd5b Microphysics git describe: 22.03-9-g65902e18 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012686575 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.330165967 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.320703063 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.310797244 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.3087267 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.310376242 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.337910138 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.303161619 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.290616847 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.291205486 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.291007899 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009424448 seconds Ending run at 05:36:49 UTC on 2022-03-23. Run time = 3.29064635 Run time without initialization = 3.107265744 Average number of zones advanced per microsecond: 0.844 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.29 ... 3.291 ... 3.291 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1114 2.1756 2.2156 67.33% Gravity::make_radial_gravity() 21 0.3344 0.3426 0.3605 10.96% MultiFab::min() 10 0.0143 0.05651 0.1241 3.77% Castro::initData() 1 0.03795 0.07806 0.1228 3.73% Castro::estTimeStep() 21 0.01789 0.06841 0.1122 3.41% FabArray::ParallelCopy_finish() 41 0.03125 0.04176 0.07821 2.38% FabArray::setVal() 143 0.06124 0.07074 0.07629 2.32% Castro::reset_internal_energy() 63 0.04907 0.04997 0.05054 1.54% StateData::FillBoundary(geom) 41 0.03922 0.04164 0.0431 1.31% FabArray::ParallelCopy_nowait() 41 0.03474 0.04061 0.0426 1.29% FillPatchIterator::Initialize 41 0.02286 0.03068 0.03376 1.03% Castro::normalize_species() 62 0.03265 0.03316 0.03356 1.02% Gravity::interpolate_monopole_grav() 21 0.0277 0.02793 0.02835 0.86% Castro::construct_new_gravity_source() 10 0.02032 0.02356 0.02599 0.79% Castro::do_advance_ctu() 10 0.01439 0.01987 0.02387 0.73% Castro::expand_state() 10 0.01138 0.01859 0.02099 0.64% Castro::computeTemp() 63 0.01812 0.01871 0.01976 0.60% Castro::initialize_do_advance() 10 0.01044 0.01626 0.0179 0.54% MultiFab::Saxpy() 20 0.01281 0.01463 0.01535 0.47% VisMF::Write(FabArray) 2 0.01181 0.01225 0.01424 0.43% Castro::initialize_advance() 10 0.008095 0.01148 0.01392 0.42% Gravity::get_new_grav_vector() 11 0.009491 0.01107 0.01323 0.40% Castro::construct_old_gravity_source() 10 0.007305 0.01104 0.01181 0.36% MultiFab::contains_nan() 20 0.01037 0.01098 0.01179 0.36% FabArray::setDomainBndry() 41 0.007109 0.01025 0.01172 0.36% Amr::writePlotFile() 2 0.008076 0.0102 0.01074 0.33% Gravity::get_old_grav_vector() 10 0.006795 0.009084 0.01019 0.31% Amr::defBaseLevel() 1 0.006746 0.007189 0.007818 0.24% Castro::construct_new_source() 50 0.00581 0.006444 0.006734 0.20% Castro::enforce_min_density() 62 0.005699 0.006032 0.006328 0.19% StateData::define() 4 0.004351 0.004607 0.004885 0.15% main() 1 0.003633 0.003753 0.003879 0.12% Castro::swap_state_time_levels() 10 0.00276 0.003465 0.003692 0.11% Castro::finalize_do_advance() 10 0.0004554 0.0008977 0.001061 0.03% Amr::coarseTimeStep() 10 0.0003297 0.000616 0.0009831 0.03% Amr::timeStep() 10 0.0001738 0.0002282 0.0004402 0.01% Amr::InitAmr() 1 0.0002832 0.0003081 0.0003834 0.01% Castro::clean_state() 62 0.0001237 0.0001398 0.0001535 0.00% StateDataPhysBCFunct::() 41 9.919e-05 0.0001259 0.0001494 0.00% Castro::enforce_consistent_e() 1 7.702e-05 8.993e-05 0.0001073 0.00% DistributionMapping::LeastUsedCPUs() 1 6.597e-06 8.354e-05 0.000107 0.00% Castro::construct_old_source() 50 4.092e-05 7.304e-05 8.7e-05 0.00% Castro::do_new_sources() 10 4.866e-05 6.342e-05 7.581e-05 0.00% Castro::subcycle_advance_ctu() 10 3.209e-05 4.917e-05 7.15e-05 0.00% Castro::do_old_sources() 10 3.976e-05 5.816e-05 7.081e-05 0.00% FabArray::ParallelCopy() 41 5.61e-05 6.296e-05 6.989e-05 0.00% Amr::writeSmallPlotFile() 1 2.55e-05 4.912e-05 6.913e-05 0.00% FillPatchSingleLevel 41 5.355e-05 5.974e-05 6.746e-05 0.00% Amr::FinalizeInit() 1 4.359e-06 1.298e-05 6.676e-05 0.00% FabArrayBase::getCPC() 41 4.29e-05 5.14e-05 6.054e-05 0.00% Castro::construct_old_gravity() 10 3.485e-05 4.939e-05 5.954e-05 0.00% Castro::finalize_advance() 10 4.82e-05 5.279e-05 5.671e-05 0.00% Castro::apply_source_to_state() 20 3.58e-05 4.367e-05 5.051e-05 0.00% Castro::construct_new_gravity() 10 3.665e-05 4.163e-05 4.56e-05 0.00% Castro::advance() 10 3.31e-05 3.832e-05 4.437e-05 0.00% Castro::enforce_speed_limit() 62 2.589e-05 3.075e-05 3.389e-05 0.00% FabArrayBase::CPC::define() 2 2.272e-05 2.721e-05 3.315e-05 0.00% Castro::check_for_nan() 20 2.124e-05 2.316e-05 2.758e-05 0.00% Castro::create_source_corrector() 10 1.179e-05 1.651e-05 2.07e-05 0.00% Gravity::swapTimeLevels() 10 8.854e-06 1.204e-05 1.458e-05 0.00% Castro::post_init() 1 2.815e-06 5.01e-06 1.202e-05 0.00% Castro::post_timestep() 10 8.217e-06 9.382e-06 1.089e-05 0.00% Amr::initSubcycle() 1 8.644e-06 9.541e-06 9.921e-06 0.00% AmrLevel::AmrLevel(dm) 1 8.16e-06 8.94e-06 9.399e-06 0.00% Gravity::set_mass_offset() 10 6.591e-06 8.008e-06 8.949e-06 0.00% Castro::computeNewDt() 9 6.945e-06 7.596e-06 8.511e-06 0.00% Castro::FluxRegFineAdd() 10 4.792e-06 6.231e-06 7.489e-06 0.00% Castro::retry_advance_ctu() 10 4.986e-06 6.328e-06 7.44e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.822e-06 4.917e-06 6.704e-06 0.00% Amr::InitializeInit() 1 2.133e-06 2.847e-06 6.465e-06 0.00% Castro::computeInitialDt() 2 2.876e-06 3.967e-06 4.878e-06 0.00% Castro::post_regrid() 1 1.806e-06 3.709e-06 4.666e-06 0.00% Amr::init() 1 1.567e-06 2.111e-06 2.463e-06 0.00% Amr::initialInit() 1 1.397e-06 1.62e-06 1.966e-06 0.00% DistributionMapping::Distribute() 1 1.028e-06 1.133e-06 1.372e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.29 3.291 3.291 100.00% Amr::coarseTimeStep() 10 3.094 3.094 3.094 94.02% Amr::timeStep() 10 3.085 3.085 3.086 93.77% Castro::advance() 10 3.07 3.071 3.071 93.32% Castro::subcycle_advance_ctu() 10 2.996 2.999 3.008 91.41% Castro::do_advance_ctu() 10 2.996 2.999 3.008 91.41% Castro::construct_ctu_hydro_source() 10 2.111 2.176 2.216 67.33% Gravity::make_radial_gravity() 21 0.3344 0.3426 0.3605 10.96% Gravity::get_new_grav_vector() 11 0.2228 0.2238 0.2245 6.82% Castro::construct_old_gravity() 10 0.1976 0.2042 0.2189 6.65% Gravity::get_old_grav_vector() 10 0.1967 0.2034 0.2183 6.63% Castro::construct_new_gravity() 10 0.1985 0.1988 0.1995 6.06% FillPatchIterator::Initialize 41 0.1601 0.1653 0.1844 5.60% Amr::init() 1 0.1828 0.1829 0.1829 5.56% Amr::initialInit() 1 0.1698 0.17 0.1701 5.17% Castro::initialize_do_advance() 10 0.1479 0.1535 0.1582 4.81% FillPatchSingleLevel 41 0.1164 0.1243 0.1544 4.69% Amr::InitializeInit() 1 0.05671 0.0964 0.1418 4.31% Amr::defBaseLevel() 1 0.05671 0.0964 0.1418 4.31% Castro::initData() 1 0.04148 0.08194 0.1264 3.84% MultiFab::min() 10 0.0143 0.05651 0.1241 3.77% Castro::expand_state() 10 0.1032 0.1088 0.1141 3.47% Amr::FinalizeInit() 1 0.02801 0.07355 0.1131 3.44% FabArray::ParallelCopy() 41 0.07347 0.08251 0.1131 3.44% Castro::estTimeStep() 21 0.01789 0.06841 0.1122 3.41% Castro::clean_state() 62 0.1059 0.1071 0.1087 3.30% Castro::computeInitialDt() 2 0.001758 0.04719 0.0869 2.64% FabArray::ParallelCopy_finish() 41 0.03125 0.04176 0.07821 2.38% FabArray::setVal() 143 0.06124 0.07074 0.07629 2.32% Castro::initialize_advance() 10 0.06204 0.07136 0.07426 2.26% Castro::computeTemp() 63 0.06782 0.06868 0.07015 2.13% Castro::do_new_sources() 10 0.05623 0.06205 0.0672 2.04% Castro::reset_internal_energy() 63 0.04907 0.04997 0.05054 1.54% Castro::do_old_sources() 10 0.0395 0.04562 0.04697 1.43% StateDataPhysBCFunct::() 41 0.03932 0.04177 0.04323 1.31% StateData::FillBoundary(geom) 41 0.03922 0.04164 0.0431 1.31% FabArray::ParallelCopy_nowait() 41 0.03481 0.04069 0.04268 1.30% Castro::normalize_species() 62 0.03265 0.03316 0.03356 1.02% Castro::construct_new_source() 50 0.02613 0.03001 0.03272 0.99% Gravity::interpolate_monopole_grav() 21 0.0277 0.02793 0.02835 0.86% Castro::post_init() 1 0.02572 0.02586 0.02603 0.79% Castro::construct_new_gravity_source() 10 0.02032 0.02356 0.02599 0.79% Amr::writePlotFile() 2 0.02229 0.02244 0.02261 0.69% Castro::apply_source_to_state() 20 0.01284 0.01467 0.0154 0.47% MultiFab::Saxpy() 20 0.01281 0.01463 0.01535 0.47% Castro::post_timestep() 10 0.01404 0.0143 0.01453 0.44% VisMF::Write(FabArray) 2 0.01181 0.01225 0.01424 0.43% Castro::construct_old_source() 50 0.007346 0.01111 0.01189 0.36% Castro::check_for_nan() 20 0.0104 0.011 0.01181 0.36% Castro::construct_old_gravity_source() 10 0.007305 0.01104 0.01181 0.36% MultiFab::contains_nan() 20 0.01037 0.01098 0.01179 0.36% FabArray::setDomainBndry() 41 0.007109 0.01025 0.01172 0.36% Castro::computeNewDt() 9 0.006812 0.007327 0.007918 0.24% Castro::enforce_min_density() 62 0.005699 0.006032 0.006328 0.19% AmrLevel::AmrLevel(dm) 1 0.00436 0.004616 0.004894 0.15% StateData::define() 4 0.004351 0.004607 0.004885 0.15% Castro::swap_state_time_levels() 10 0.00276 0.003465 0.003692 0.11% Castro::post_regrid() 1 0.001422 0.001461 0.001516 0.05% Castro::finalize_do_advance() 10 0.0004554 0.0008977 0.001061 0.03% Amr::InitAmr() 1 0.0002927 0.0003176 0.0003921 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.15e-05 8.959e-05 0.000115 0.00% Castro::enforce_consistent_e() 1 7.702e-05 8.993e-05 0.0001073 0.00% DistributionMapping::LeastUsedCPUs() 1 6.597e-06 8.354e-05 0.000107 0.00% FabArrayBase::getCPC() 41 7.212e-05 7.861e-05 8.549e-05 0.00% Amr::writeSmallPlotFile() 1 2.55e-05 4.912e-05 6.913e-05 0.00% Castro::finalize_advance() 10 5.437e-05 5.903e-05 6.334e-05 0.00% Castro::enforce_speed_limit() 62 2.589e-05 3.075e-05 3.389e-05 0.00% FabArrayBase::CPC::define() 2 2.272e-05 2.721e-05 3.315e-05 0.00% Castro::create_source_corrector() 10 1.179e-05 1.651e-05 2.07e-05 0.00% Gravity::swapTimeLevels() 10 8.854e-06 1.204e-05 1.458e-05 0.00% Amr::initSubcycle() 1 8.644e-06 9.541e-06 9.921e-06 0.00% Gravity::set_mass_offset() 10 6.591e-06 8.008e-06 8.949e-06 0.00% Castro::FluxRegFineAdd() 10 4.792e-06 6.231e-06 7.489e-06 0.00% Castro::retry_advance_ctu() 10 4.986e-06 6.328e-06 7.44e-06 0.00% DistributionMapping::Distribute() 1 1.028e-06 1.133e-06 1.372e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-25-gee651cd5b301) finalized