MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-27-g2ccb8166b22c) initialized Starting run at 16:17:40 UTC on 2022-03-24. Successfully read inputs file ... Castro git describe: 22.02-15-g8f455944a AMReX git describe: 22.03-27-g2ccb8166b Microphysics git describe: 22.03-10-ge25a9ed2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012722717 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.333056024 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.318037554 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.310666328 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.309615139 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.308826293 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.332694078 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.29630238 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.288553744 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.289380685 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.287375703 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010194157 seconds Ending run at 16:17:44 UTC on 2022-03-24. Run time = 3.275161492 Run time without initialization = 3.089119414 Average number of zones advanced per microsecond: 0.849 Average number of zones advanced per microsecond per rank: 0.106 TinyProfiler total time across processes [min...avg...max]: 3.274 ... 3.275 ... 3.275 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1263 2.1667 2.1989 67.14% Gravity::make_radial_gravity() 21 0.3239 0.3348 0.3528 10.77% Castro::initData() 1 0.03891 0.07946 0.124 3.79% Castro::estTimeStep() 21 0.0174 0.07032 0.1081 3.30% MultiFab::min() 10 0.01194 0.04657 0.08858 2.70% FabArray::setVal() 143 0.07134 0.07455 0.07814 2.39% FabArray::ParallelCopy_finish() 41 0.03316 0.0381 0.05262 1.61% Castro::reset_internal_energy() 63 0.04875 0.04972 0.05113 1.56% StateData::FillBoundary(geom) 41 0.03674 0.04044 0.04274 1.31% FabArray::ParallelCopy_nowait() 41 0.03874 0.04099 0.04216 1.29% FillPatchIterator::Initialize 41 0.0234 0.03017 0.03412 1.04% Castro::normalize_species() 62 0.03249 0.03327 0.03397 1.04% Gravity::interpolate_monopole_grav() 21 0.02742 0.02777 0.02792 0.85% Castro::construct_new_gravity_source() 10 0.02288 0.0246 0.02692 0.82% Castro::do_advance_ctu() 10 0.01842 0.0209 0.02463 0.75% Castro::expand_state() 10 0.01121 0.01817 0.02059 0.63% Castro::computeTemp() 63 0.01837 0.0189 0.0196 0.60% Castro::initialize_do_advance() 10 0.01038 0.01639 0.01768 0.54% MultiFab::Saxpy() 20 0.01491 0.01601 0.01655 0.51% VisMF::Write(FabArray) 2 0.01231 0.01274 0.01483 0.45% Castro::initialize_advance() 10 0.01057 0.01239 0.0144 0.44% Gravity::get_new_grav_vector() 11 0.01059 0.01159 0.0133 0.41% Castro::construct_old_gravity_source() 10 0.009568 0.01157 0.01221 0.37% MultiFab::contains_nan() 20 0.0107 0.01129 0.01218 0.37% FabArray::setDomainBndry() 41 0.007249 0.01017 0.01181 0.36% Amr::writePlotFile() 2 0.008331 0.01036 0.01075 0.33% Gravity::get_old_grav_vector() 10 0.008115 0.009326 0.0104 0.32% Amr::defBaseLevel() 1 0.006369 0.007535 0.01 0.31% Castro::construct_new_source() 50 0.006437 0.006759 0.007042 0.22% Castro::enforce_min_density() 62 0.006532 0.006804 0.00702 0.21% StateData::define() 4 0.00423 0.004856 0.006244 0.19% main() 1 0.003323 0.00399 0.004577 0.14% Castro::swap_state_time_levels() 10 0.002995 0.003719 0.003843 0.12% Amr::coarseTimeStep() 10 0.0004176 0.0007029 0.001395 0.04% Castro::finalize_do_advance() 10 0.0004622 0.0008895 0.001057 0.03% Amr::timeStep() 10 0.0001436 0.0002186 0.0005022 0.02% Amr::InitAmr() 1 0.0002878 0.000349 0.0004617 0.01% DistributionMapping::LeastUsedCPUs() 1 6.907e-06 0.0001451 0.0002167 0.01% Castro::clean_state() 62 0.0001435 0.0001577 0.0001816 0.01% StateDataPhysBCFunct::() 41 0.0001242 0.0001364 0.0001456 0.00% Amr::FinalizeInit() 1 3.571e-06 1.718e-05 0.0001069 0.00% Castro::enforce_consistent_e() 1 8.41e-05 8.909e-05 0.0001009 0.00% Castro::construct_old_source() 50 7.215e-05 8.615e-05 9.529e-05 0.00% FabArrayBase::getCPC() 41 4.269e-05 5.616e-05 8.702e-05 0.00% FabArray::ParallelCopy() 41 6.201e-05 6.9e-05 8.556e-05 0.00% Castro::subcycle_advance_ctu() 10 4.861e-05 6.366e-05 8.14e-05 0.00% Castro::do_new_sources() 10 6.213e-05 7.157e-05 7.99e-05 0.00% Castro::do_old_sources() 10 5.802e-05 6.957e-05 7.929e-05 0.00% FillPatchSingleLevel 41 6.077e-05 6.758e-05 7.687e-05 0.00% Castro::construct_old_gravity() 10 5.539e-05 5.981e-05 6.841e-05 0.00% Amr::writeSmallPlotFile() 1 3.562e-05 5.574e-05 6.411e-05 0.00% Castro::apply_source_to_state() 20 4.586e-05 5.464e-05 6.056e-05 0.00% Castro::finalize_advance() 10 5.174e-05 5.462e-05 6.032e-05 0.00% Castro::construct_new_gravity() 10 3.689e-05 4.636e-05 5.628e-05 0.00% Castro::advance() 10 3.439e-05 3.846e-05 4.136e-05 0.00% Castro::enforce_speed_limit() 62 2.903e-05 3.618e-05 4.105e-05 0.00% FabArrayBase::CPC::define() 2 2.258e-05 2.741e-05 3.48e-05 0.00% Castro::check_for_nan() 20 2.404e-05 2.807e-05 3.458e-05 0.00% Castro::create_source_corrector() 10 1.523e-05 1.72e-05 1.972e-05 0.00% Gravity::swapTimeLevels() 10 1.298e-05 1.548e-05 1.701e-05 0.00% Amr::initSubcycle() 1 8.569e-06 1.096e-05 1.512e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.829e-06 9.336e-06 1.402e-05 0.00% Castro::retry_advance_ctu() 10 5.053e-06 8.297e-06 1.272e-05 0.00% Castro::post_timestep() 10 8.322e-06 9.614e-06 1.068e-05 0.00% Castro::post_init() 1 2.625e-06 4.55e-06 9.156e-06 0.00% Castro::computeNewDt() 9 6.893e-06 7.937e-06 8.947e-06 0.00% Gravity::set_mass_offset() 10 6.481e-06 7.57e-06 8.502e-06 0.00% Castro::FluxRegFineAdd() 10 5.082e-06 6.933e-06 7.999e-06 0.00% Amr::InitializeInit() 1 2.11e-06 2.942e-06 6.823e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.521e-06 4.558e-06 5.632e-06 0.00% Castro::computeInitialDt() 2 2.659e-06 3.499e-06 4.306e-06 0.00% Amr::init() 1 1.909e-06 2.501e-06 4.04e-06 0.00% Castro::post_regrid() 1 1.959e-06 2.786e-06 3.718e-06 0.00% Amr::initialInit() 1 1.325e-06 1.646e-06 2.169e-06 0.00% DistributionMapping::Distribute() 1 9.61e-07 1.312e-06 1.59e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.274 3.275 3.275 100.00% Amr::coarseTimeStep() 10 3.074 3.074 3.074 93.87% Amr::timeStep() 10 3.065 3.065 3.066 93.60% Castro::advance() 10 3.05 3.051 3.051 93.15% Castro::subcycle_advance_ctu() 10 2.972 2.975 2.977 90.88% Castro::do_advance_ctu() 10 2.972 2.975 2.976 90.88% Castro::construct_ctu_hydro_source() 10 2.126 2.167 2.199 67.14% Gravity::make_radial_gravity() 21 0.3239 0.3348 0.3528 10.77% Gravity::get_new_grav_vector() 11 0.2178 0.219 0.2206 6.74% Castro::construct_old_gravity() 10 0.193 0.201 0.217 6.62% Gravity::get_old_grav_vector() 10 0.1921 0.2002 0.2163 6.60% Castro::construct_new_gravity() 10 0.1944 0.195 0.196 5.98% Amr::init() 1 0.1854 0.1856 0.1856 5.67% Amr::initialInit() 1 0.1725 0.1727 0.1729 5.28% FillPatchIterator::Initialize 41 0.1527 0.1602 0.1665 5.08% Castro::initialize_do_advance() 10 0.1341 0.1503 0.1557 4.75% Amr::InitializeInit() 1 0.05654 0.09773 0.1455 4.44% Amr::defBaseLevel() 1 0.05653 0.09773 0.1455 4.44% FillPatchSingleLevel 41 0.1143 0.1199 0.1285 3.92% Castro::initData() 1 0.04242 0.08315 0.1275 3.89% Amr::FinalizeInit() 1 0.02707 0.07501 0.1161 3.55% Castro::clean_state() 62 0.1062 0.108 0.1109 3.39% Castro::expand_state() 10 0.09668 0.1051 0.1096 3.35% Castro::estTimeStep() 21 0.0174 0.07032 0.1081 3.30% FabArray::ParallelCopy() 41 0.07418 0.07924 0.09156 2.80% Castro::computeInitialDt() 2 0.001632 0.04951 0.09067 2.77% MultiFab::min() 10 0.01194 0.04657 0.08858 2.70% FabArray::setVal() 143 0.07134 0.07455 0.07814 2.39% Castro::initialize_advance() 10 0.07404 0.07561 0.0781 2.38% Castro::computeTemp() 63 0.06759 0.06862 0.07073 2.16% Castro::do_new_sources() 10 0.06058 0.06489 0.06952 2.12% FabArray::ParallelCopy_finish() 41 0.03316 0.0381 0.05262 1.61% Castro::reset_internal_energy() 63 0.04875 0.04972 0.05113 1.56% Castro::do_old_sources() 10 0.04591 0.04758 0.04838 1.48% StateDataPhysBCFunct::() 41 0.03688 0.04058 0.04289 1.31% StateData::FillBoundary(geom) 41 0.03674 0.04044 0.04274 1.31% FabArray::ParallelCopy_nowait() 41 0.03885 0.04107 0.04223 1.29% Castro::normalize_species() 62 0.03249 0.03327 0.03397 1.04% Castro::construct_new_source() 50 0.0294 0.03136 0.03389 1.03% Gravity::interpolate_monopole_grav() 21 0.02742 0.02777 0.02792 0.85% Castro::construct_new_gravity_source() 10 0.02288 0.0246 0.02692 0.82% Castro::post_init() 1 0.02477 0.02498 0.0251 0.77% Amr::writePlotFile() 2 0.023 0.0231 0.02316 0.71% Castro::apply_source_to_state() 20 0.01497 0.01607 0.01661 0.51% MultiFab::Saxpy() 20 0.01491 0.01601 0.01655 0.51% Castro::post_timestep() 10 0.01406 0.01445 0.01485 0.45% VisMF::Write(FabArray) 2 0.01231 0.01274 0.01483 0.45% Castro::construct_old_source() 50 0.009649 0.01166 0.01231 0.38% Castro::construct_old_gravity_source() 10 0.009568 0.01157 0.01221 0.37% Castro::check_for_nan() 20 0.01073 0.01131 0.0122 0.37% MultiFab::contains_nan() 20 0.0107 0.01129 0.01218 0.37% FabArray::setDomainBndry() 41 0.007249 0.01017 0.01181 0.36% Castro::computeNewDt() 9 0.006853 0.007497 0.008025 0.25% Castro::enforce_min_density() 62 0.006532 0.006804 0.00702 0.21% AmrLevel::AmrLevel(dm) 1 0.004238 0.004866 0.006254 0.19% StateData::define() 4 0.00423 0.004856 0.006244 0.19% Castro::swap_state_time_levels() 10 0.002995 0.003719 0.003843 0.12% Castro::post_regrid() 1 0.001388 0.001454 0.001524 0.05% Castro::finalize_do_advance() 10 0.0004622 0.0008895 0.001057 0.03% Amr::InitAmr() 1 0.0002968 0.00036 0.0004768 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.328e-05 0.000151 0.0002237 0.01% DistributionMapping::LeastUsedCPUs() 1 6.907e-06 0.0001451 0.0002167 0.01% FabArrayBase::getCPC() 41 6.601e-05 8.356e-05 0.0001129 0.00% Castro::enforce_consistent_e() 1 8.41e-05 8.909e-05 0.0001009 0.00% Castro::finalize_advance() 10 5.791e-05 6.155e-05 6.682e-05 0.00% Amr::writeSmallPlotFile() 1 3.562e-05 5.574e-05 6.411e-05 0.00% Castro::enforce_speed_limit() 62 2.903e-05 3.618e-05 4.105e-05 0.00% FabArrayBase::CPC::define() 2 2.258e-05 2.741e-05 3.48e-05 0.00% Castro::create_source_corrector() 10 1.523e-05 1.72e-05 1.972e-05 0.00% Gravity::swapTimeLevels() 10 1.298e-05 1.548e-05 1.701e-05 0.00% Amr::initSubcycle() 1 8.569e-06 1.096e-05 1.512e-05 0.00% Castro::retry_advance_ctu() 10 5.053e-06 8.297e-06 1.272e-05 0.00% Gravity::set_mass_offset() 10 6.481e-06 7.57e-06 8.502e-06 0.00% Castro::FluxRegFineAdd() 10 5.082e-06 6.933e-06 7.999e-06 0.00% DistributionMapping::Distribute() 1 9.61e-07 1.312e-06 1.59e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-27-g2ccb8166b22c) finalized