MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-27-g2ccb8166b22c) initialized Starting run at 05:37:04 UTC on 2022-03-24. Successfully read inputs file ... Castro git describe: 22.02-14-g23fc313a7 AMReX git describe: 22.03-27-g2ccb8166b Microphysics git describe: 22.03-10-ge25a9ed2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013135889 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.352640324 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.34824422 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.372348743 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.31216931 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.316249178 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.334985593 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.301070065 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.293481035 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.295016531 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.292500579 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.023205607 seconds Ending run at 05:37:08 UTC on 2022-03-24. Run time = 3.422676648 Run time without initialization = 3.245539555 Average number of zones advanced per microsecond: 0.808 Average number of zones advanced per microsecond per rank: 0.101 TinyProfiler total time across processes [min...avg...max]: 3.422 ... 3.423 ... 3.423 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1555 2.1997 2.2747 66.46% Gravity::make_radial_gravity() 21 0.3399 0.351 0.3583 10.47% MultiFab::min() 10 0.05297 0.1308 0.1764 5.15% Castro::initData() 1 0.03841 0.07928 0.1156 3.38% Castro::estTimeStep() 21 0.01876 0.0578 0.1022 2.99% FabArray::setVal() 143 0.06962 0.07527 0.08099 2.37% FabArray::ParallelCopy_finish() 41 0.0352 0.048 0.05946 1.74% Castro::reset_internal_energy() 63 0.0482 0.05039 0.05175 1.51% StateData::FillBoundary(geom) 41 0.03754 0.04125 0.04562 1.33% FabArray::ParallelCopy_nowait() 41 0.03946 0.04134 0.04389 1.28% Castro::normalize_species() 62 0.03259 0.03358 0.0347 1.01% FillPatchIterator::Initialize 41 0.02365 0.03098 0.03405 0.99% Gravity::interpolate_monopole_grav() 21 0.02803 0.02862 0.03001 0.88% Amr::writePlotFile() 2 0.02253 0.0248 0.02537 0.74% Castro::construct_new_gravity_source() 10 0.02271 0.0239 0.0249 0.73% Castro::do_advance_ctu() 10 0.01837 0.02043 0.0236 0.69% Castro::expand_state() 10 0.01384 0.01921 0.02132 0.62% Castro::computeTemp() 63 0.01852 0.01907 0.01974 0.58% Castro::initialize_do_advance() 10 0.01258 0.01653 0.01832 0.54% MultiFab::Saxpy() 20 0.01517 0.01621 0.01805 0.53% Castro::initialize_advance() 10 0.01065 0.01247 0.01453 0.42% VisMF::Write(FabArray) 2 0.01122 0.01173 0.01405 0.41% Gravity::get_new_grav_vector() 11 0.01067 0.01154 0.0134 0.39% Castro::construct_old_gravity_source() 10 0.01051 0.01133 0.01272 0.37% MultiFab::contains_nan() 20 0.01044 0.01148 0.01243 0.36% FabArray::setDomainBndry() 41 0.007634 0.01022 0.01132 0.33% Gravity::get_old_grav_vector() 10 0.0091 0.009756 0.01108 0.32% Amr::defBaseLevel() 1 0.006571 0.006849 0.008449 0.25% Castro::enforce_min_density() 62 0.006496 0.00679 0.007003 0.20% Castro::construct_new_source() 50 0.006564 0.006716 0.006953 0.20% StateData::define() 4 0.004325 0.004409 0.004819 0.14% Castro::swap_state_time_levels() 10 0.002956 0.003797 0.004209 0.12% main() 1 0.003399 0.003718 0.003891 0.11% Castro::finalize_do_advance() 10 0.0008497 0.001065 0.00122 0.04% Amr::coarseTimeStep() 10 0.0004827 0.0006387 0.0009899 0.03% Amr::timeStep() 10 0.0001777 0.0002362 0.0005498 0.02% Amr::InitAmr() 1 0.0002668 0.0002928 0.0004142 0.01% Castro::clean_state() 62 0.0001249 0.0001388 0.0001574 0.00% DistributionMapping::LeastUsedCPUs() 1 9.963e-06 0.0001243 0.0001438 0.00% StateDataPhysBCFunct::() 41 0.0001035 0.0001203 0.0001331 0.00% Castro::enforce_consistent_e() 1 7.504e-05 8.937e-05 9.673e-05 0.00% Amr::FinalizeInit() 1 4.05e-06 1.661e-05 9.32e-05 0.00% Castro::construct_old_source() 50 5.73e-05 7.109e-05 8.116e-05 0.00% FabArray::ParallelCopy() 41 5.52e-05 6.388e-05 7.522e-05 0.00% Castro::do_new_sources() 10 5.006e-05 6.18e-05 7.255e-05 0.00% Castro::do_old_sources() 10 4.781e-05 5.76e-05 7.233e-05 0.00% FillPatchSingleLevel 41 5.317e-05 6.036e-05 6.803e-05 0.00% Amr::writeSmallPlotFile() 1 3.68e-05 5.135e-05 6.787e-05 0.00% FabArrayBase::getCPC() 41 4.042e-05 5.213e-05 6.48e-05 0.00% Castro::subcycle_advance_ctu() 10 3.779e-05 5.231e-05 6.439e-05 0.00% Castro::construct_old_gravity() 10 4.23e-05 5.21e-05 6.134e-05 0.00% Castro::finalize_advance() 10 5.124e-05 5.362e-05 5.571e-05 0.00% Castro::apply_source_to_state() 20 3.93e-05 4.473e-05 5.464e-05 0.00% Castro::advance() 10 3.211e-05 3.829e-05 5.138e-05 0.00% Castro::construct_new_gravity() 10 3.864e-05 4.402e-05 4.87e-05 0.00% FabArrayBase::CPC::define() 2 2.497e-05 2.904e-05 3.933e-05 0.00% Castro::enforce_speed_limit() 62 2.653e-05 3.257e-05 3.887e-05 0.00% Castro::check_for_nan() 20 2.322e-05 2.57e-05 2.817e-05 0.00% Castro::create_source_corrector() 10 1.404e-05 1.736e-05 2.182e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.398e-06 1.102e-05 1.788e-05 0.00% Gravity::swapTimeLevels() 10 1.122e-05 1.276e-05 1.397e-05 0.00% Castro::post_timestep() 10 7.463e-06 9.64e-06 1.099e-05 0.00% Castro::computeNewDt() 9 6.94e-06 7.702e-06 9.873e-06 0.00% Amr::initSubcycle() 1 8.131e-06 9.114e-06 9.575e-06 0.00% Gravity::set_mass_offset() 10 6.799e-06 8.149e-06 9.545e-06 0.00% Castro::FluxRegFineAdd() 10 5.844e-06 6.574e-06 8.238e-06 0.00% Castro::retry_advance_ctu() 10 4.626e-06 5.948e-06 7.515e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.643e-06 4.841e-06 7.114e-06 0.00% Amr::InitializeInit() 1 2.006e-06 3.279e-06 6.432e-06 0.00% Castro::computeInitialDt() 2 3.011e-06 4.181e-06 5.125e-06 0.00% Castro::post_regrid() 1 2.229e-06 3.691e-06 4.704e-06 0.00% Castro::post_init() 1 2.596e-06 3.879e-06 4.5e-06 0.00% Amr::init() 1 1.784e-06 2.194e-06 2.631e-06 0.00% Amr::initialInit() 1 1.376e-06 1.636e-06 1.857e-06 0.00% DistributionMapping::Distribute() 1 9.3e-07 1.077e-06 1.343e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.422 3.423 3.423 100.00% Amr::coarseTimeStep() 10 3.218 3.218 3.218 94.03% Amr::timeStep() 10 3.209 3.209 3.21 93.78% Castro::advance() 10 3.194 3.194 3.194 93.33% Castro::subcycle_advance_ctu() 10 3.116 3.119 3.122 91.20% Castro::do_advance_ctu() 10 3.116 3.119 3.122 91.20% Castro::construct_ctu_hydro_source() 10 2.156 2.2 2.275 66.46% Gravity::make_radial_gravity() 21 0.3399 0.351 0.3583 10.47% Gravity::get_new_grav_vector() 11 0.2261 0.2283 0.2303 6.73% Castro::construct_old_gravity() 10 0.2032 0.2128 0.2205 6.44% Gravity::get_old_grav_vector() 10 0.2024 0.212 0.2197 6.42% Castro::construct_new_gravity() 10 0.2007 0.202 0.2034 5.94% FillPatchIterator::Initialize 41 0.1615 0.1721 0.1796 5.25% Amr::init() 1 0.1766 0.1767 0.1767 5.16% MultiFab::min() 10 0.05297 0.1308 0.1764 5.15% Amr::initialInit() 1 0.1632 0.1635 0.1637 4.78% Castro::initialize_do_advance() 10 0.1474 0.1562 0.162 4.73% FillPatchSingleLevel 41 0.1214 0.1309 0.1397 4.08% Amr::InitializeInit() 1 0.05629 0.0975 0.1337 3.91% Amr::defBaseLevel() 1 0.05629 0.0975 0.1337 3.91% Castro::initData() 1 0.04231 0.08331 0.1197 3.50% Castro::expand_state() 10 0.1048 0.1107 0.115 3.36% Castro::clean_state() 62 0.1058 0.1091 0.1118 3.27% Amr::FinalizeInit() 1 0.02988 0.06596 0.1073 3.13% Castro::estTimeStep() 21 0.01876 0.0578 0.1022 2.99% FabArray::ParallelCopy() 41 0.07923 0.08948 0.09909 2.89% FabArray::setVal() 143 0.06962 0.07527 0.08099 2.37% Castro::computeInitialDt() 2 0.001801 0.03799 0.07922 2.31% Castro::initialize_advance() 10 0.07252 0.07482 0.07774 2.27% Castro::computeTemp() 63 0.0668 0.06946 0.07143 2.09% Castro::do_new_sources() 10 0.06054 0.06341 0.06669 1.95% FabArray::ParallelCopy_finish() 41 0.0352 0.048 0.05946 1.74% Castro::do_old_sources() 10 0.0447 0.04894 0.05365 1.57% Castro::reset_internal_energy() 63 0.0482 0.05039 0.05175 1.51% StateDataPhysBCFunct::() 41 0.03764 0.04137 0.04574 1.34% StateData::FillBoundary(geom) 41 0.03754 0.04125 0.04562 1.33% FabArray::ParallelCopy_nowait() 41 0.03955 0.04142 0.04397 1.28% Amr::writePlotFile() 2 0.03629 0.03653 0.03678 1.07% Castro::normalize_species() 62 0.03259 0.03358 0.0347 1.01% Castro::construct_new_source() 50 0.02929 0.03061 0.03185 0.93% Gravity::interpolate_monopole_grav() 21 0.02803 0.02862 0.03001 0.88% Castro::post_init() 1 0.0273 0.02746 0.02759 0.81% Castro::construct_new_gravity_source() 10 0.02271 0.0239 0.0249 0.73% Castro::apply_source_to_state() 20 0.01522 0.01625 0.01809 0.53% MultiFab::Saxpy() 20 0.01517 0.01621 0.01805 0.53% Castro::post_timestep() 10 0.01436 0.01459 0.01497 0.44% VisMF::Write(FabArray) 2 0.01122 0.01173 0.01405 0.41% Castro::construct_old_source() 50 0.01057 0.0114 0.01279 0.37% Castro::construct_old_gravity_source() 10 0.01051 0.01133 0.01272 0.37% Castro::check_for_nan() 20 0.01046 0.01151 0.01246 0.36% MultiFab::contains_nan() 20 0.01044 0.01148 0.01243 0.36% FabArray::setDomainBndry() 41 0.007634 0.01022 0.01132 0.33% Castro::computeNewDt() 9 0.006978 0.007827 0.008279 0.24% Castro::enforce_min_density() 62 0.006496 0.00679 0.007003 0.20% AmrLevel::AmrLevel(dm) 1 0.004335 0.00442 0.00483 0.14% StateData::define() 4 0.004325 0.004409 0.004819 0.14% Castro::swap_state_time_levels() 10 0.002956 0.003797 0.004209 0.12% Castro::post_regrid() 1 0.001403 0.001511 0.001779 0.05% Castro::finalize_do_advance() 10 0.0008497 0.001065 0.00122 0.04% Amr::InitAmr() 1 0.0002749 0.0003019 0.0004227 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.539e-05 0.0001302 0.0001519 0.00% DistributionMapping::LeastUsedCPUs() 1 9.963e-06 0.0001243 0.0001438 0.00% Castro::enforce_consistent_e() 1 7.504e-05 8.937e-05 9.673e-05 0.00% FabArrayBase::getCPC() 41 6.682e-05 8.117e-05 8.977e-05 0.00% Amr::writeSmallPlotFile() 1 3.68e-05 5.135e-05 6.787e-05 0.00% Castro::finalize_advance() 10 5.722e-05 6.019e-05 6.26e-05 0.00% FabArrayBase::CPC::define() 2 2.497e-05 2.904e-05 3.933e-05 0.00% Castro::enforce_speed_limit() 62 2.653e-05 3.257e-05 3.887e-05 0.00% Castro::create_source_corrector() 10 1.404e-05 1.736e-05 2.182e-05 0.00% Gravity::swapTimeLevels() 10 1.122e-05 1.276e-05 1.397e-05 0.00% Amr::initSubcycle() 1 8.131e-06 9.114e-06 9.575e-06 0.00% Gravity::set_mass_offset() 10 6.799e-06 8.149e-06 9.545e-06 0.00% Castro::FluxRegFineAdd() 10 5.844e-06 6.574e-06 8.238e-06 0.00% Castro::retry_advance_ctu() 10 4.626e-06 5.948e-06 7.515e-06 0.00% DistributionMapping::Distribute() 1 9.3e-07 1.077e-06 1.343e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-27-g2ccb8166b22c) finalized