MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-31-g619630d18031) initialized Starting run at 05:35:01 UTC on 2022-03-25. Successfully read inputs file ... Castro git describe: 22.02-15-g933259a8d AMReX git describe: 22.03-31-g619630d18 Microphysics git describe: 22.03-11-g198df193 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014118145 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.339991061 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.331076614 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.312023926 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.310197237 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.310875125 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.337818389 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.296825693 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.294597597 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.291242834 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.290320631 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009426121 seconds Ending run at 05:35:04 UTC on 2022-03-25. Run time = 3.327076696 Run time without initialization = 3.127745011 Average number of zones advanced per microsecond: 0.838 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.327 ... 3.327 ... 3.327 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1204 2.1822 2.2153 66.58% Gravity::make_radial_gravity() 21 0.3361 0.3506 0.3694 11.10% Castro::initData() 1 0.03829 0.09388 0.1327 3.99% Castro::estTimeStep() 21 0.01806 0.0637 0.1314 3.95% MultiFab::min() 10 0.02594 0.06352 0.1301 3.91% FabArray::ParallelCopy_finish() 41 0.03358 0.04308 0.07886 2.37% FabArray::setVal() 143 0.05818 0.0693 0.07529 2.26% Castro::reset_internal_energy() 63 0.04911 0.05026 0.05168 1.55% StateData::FillBoundary(geom) 41 0.03917 0.04122 0.04491 1.35% FabArray::ParallelCopy_nowait() 41 0.03425 0.04075 0.04258 1.28% Castro::normalize_species() 62 0.03228 0.03304 0.03406 1.02% FillPatchIterator::Initialize 41 0.0225 0.03034 0.03311 1.00% Gravity::interpolate_monopole_grav() 21 0.02777 0.02831 0.02959 0.89% Castro::construct_new_gravity_source() 10 0.02039 0.0234 0.02592 0.78% Castro::do_advance_ctu() 10 0.01448 0.01938 0.02434 0.73% Castro::expand_state() 10 0.01138 0.01825 0.02168 0.65% Castro::computeTemp() 63 0.01814 0.01902 0.01971 0.59% Castro::initialize_do_advance() 10 0.009947 0.01623 0.01861 0.56% MultiFab::Saxpy() 20 0.0131 0.01472 0.01582 0.48% VisMF::Write(FabArray) 2 0.01082 0.01195 0.01453 0.44% Castro::initialize_advance() 10 0.008449 0.01165 0.0141 0.42% Gravity::get_new_grav_vector() 11 0.009732 0.01107 0.01297 0.39% MultiFab::contains_nan() 20 0.01005 0.0109 0.01239 0.37% Amr::writePlotFile() 2 0.009245 0.01115 0.01206 0.36% Castro::construct_old_gravity_source() 10 0.007024 0.01101 0.01187 0.36% FabArray::setDomainBndry() 41 0.006931 0.01016 0.01172 0.35% Gravity::get_old_grav_vector() 10 0.006629 0.009 0.01031 0.31% Amr::defBaseLevel() 1 0.006613 0.008859 0.009587 0.29% Castro::enforce_min_density() 62 0.006334 0.006773 0.00699 0.21% Castro::construct_new_source() 50 0.005735 0.006394 0.006756 0.20% StateData::define() 4 0.004342 0.00582 0.006288 0.19% Castro::swap_state_time_levels() 10 0.002359 0.003479 0.004152 0.12% main() 1 0.003636 0.003793 0.003966 0.12% Amr::coarseTimeStep() 10 0.000432 0.0006767 0.001212 0.04% Castro::finalize_do_advance() 10 0.0004613 0.0009726 0.001178 0.04% Amr::InitAmr() 1 0.00029 0.0004351 0.000606 0.02% Amr::timeStep() 10 0.0001679 0.0002371 0.0005305 0.02% DistributionMapping::LeastUsedCPUs() 1 8.533e-06 0.0001957 0.0003537 0.01% Castro::clean_state() 62 0.0001307 0.0001436 0.0001574 0.00% StateDataPhysBCFunct::() 41 0.0001168 0.0001263 0.0001344 0.00% Castro::enforce_consistent_e() 1 7.918e-05 8.994e-05 9.999e-05 0.00% Castro::construct_old_source() 50 4.419e-05 7.092e-05 8.442e-05 0.00% Castro::do_old_sources() 10 4.252e-05 5.832e-05 7.349e-05 0.00% Castro::do_new_sources() 10 5.015e-05 6.022e-05 7.3e-05 0.00% Castro::subcycle_advance_ctu() 10 3.75e-05 5.485e-05 6.994e-05 0.00% Amr::FinalizeInit() 1 3.706e-06 1.258e-05 6.691e-05 0.00% FillPatchSingleLevel 41 5.499e-05 6.178e-05 6.622e-05 0.00% FabArray::ParallelCopy() 41 5.864e-05 6.21e-05 6.468e-05 0.00% FabArrayBase::getCPC() 41 4.684e-05 5.513e-05 6.415e-05 0.00% Amr::writeSmallPlotFile() 1 3.954e-05 5.366e-05 6.326e-05 0.00% Castro::finalize_advance() 10 5.086e-05 5.476e-05 5.751e-05 0.00% Castro::construct_old_gravity() 10 4.197e-05 4.911e-05 5.532e-05 0.00% Castro::apply_source_to_state() 20 3.56e-05 4.644e-05 5.385e-05 0.00% Castro::construct_new_gravity() 10 4.051e-05 4.365e-05 4.654e-05 0.00% Castro::advance() 10 3.35e-05 3.651e-05 4.03e-05 0.00% Castro::enforce_speed_limit() 62 2.916e-05 3.302e-05 3.642e-05 0.00% FabArrayBase::CPC::define() 2 2.288e-05 2.572e-05 2.991e-05 0.00% Castro::check_for_nan() 20 2.319e-05 2.591e-05 2.96e-05 0.00% Castro::create_source_corrector() 10 1.373e-05 1.691e-05 1.923e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.861e-06 1.265e-05 1.692e-05 0.00% Amr::initSubcycle() 1 9.224e-06 1.394e-05 1.626e-05 0.00% Gravity::swapTimeLevels() 10 8.155e-06 1.224e-05 1.384e-05 0.00% Castro::FluxRegFineAdd() 10 5.332e-06 7.285e-06 1.149e-05 0.00% Castro::post_init() 1 3.012e-06 5.784e-06 1.085e-05 0.00% Castro::post_timestep() 10 8.352e-06 9.266e-06 1.028e-05 0.00% Gravity::set_mass_offset() 10 7.228e-06 8.136e-06 1.008e-05 0.00% Castro::computeNewDt() 9 7.308e-06 7.824e-06 8.879e-06 0.00% Amr::InitializeInit() 1 2.462e-06 3.475e-06 8.259e-06 0.00% Castro::retry_advance_ctu() 10 5.685e-06 6.347e-06 8.131e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.114e-06 5.046e-06 6.694e-06 0.00% Castro::post_regrid() 1 2.048e-06 4.089e-06 5.421e-06 0.00% Castro::computeInitialDt() 2 3.371e-06 3.864e-06 4.88e-06 0.00% Amr::init() 1 1.936e-06 2.232e-06 2.457e-06 0.00% Amr::initialInit() 1 1.476e-06 1.756e-06 2.022e-06 0.00% DistributionMapping::Distribute() 1 1.166e-06 1.385e-06 1.537e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.327 3.327 3.327 100.00% Amr::coarseTimeStep() 10 3.114 3.114 3.114 93.61% Amr::timeStep() 10 3.104 3.105 3.106 93.35% Castro::advance() 10 3.09 3.09 3.091 92.89% Castro::subcycle_advance_ctu() 10 3.016 3.019 3.029 91.04% Castro::do_advance_ctu() 10 3.015 3.019 3.029 91.04% Castro::construct_ctu_hydro_source() 10 2.12 2.182 2.215 66.58% Gravity::make_radial_gravity() 21 0.3361 0.3506 0.3694 11.10% Castro::construct_old_gravity() 10 0.2005 0.2116 0.2265 6.81% Gravity::get_old_grav_vector() 10 0.1996 0.2108 0.2258 6.79% Gravity::get_new_grav_vector() 11 0.2239 0.2248 0.2257 6.78% Castro::construct_new_gravity() 10 0.1975 0.1983 0.1989 5.98% Amr::init() 1 0.1985 0.1987 0.1989 5.98% Amr::initialInit() 1 0.1843 0.1851 0.1858 5.58% FillPatchIterator::Initialize 41 0.1564 0.1659 0.1831 5.50% Castro::initialize_do_advance() 10 0.1445 0.1534 0.1594 4.79% Amr::InitializeInit() 1 0.05448 0.1151 0.1554 4.67% Amr::defBaseLevel() 1 0.05448 0.115 0.1554 4.67% FillPatchSingleLevel 41 0.1167 0.1254 0.1537 4.62% Castro::initData() 1 0.04191 0.09771 0.1366 4.11% Castro::estTimeStep() 21 0.01806 0.0637 0.1314 3.95% Amr::FinalizeInit() 1 0.0295 0.07007 0.1311 3.94% MultiFab::min() 10 0.02594 0.06352 0.1301 3.91% Castro::expand_state() 10 0.09923 0.1083 0.1149 3.45% FabArray::ParallelCopy() 41 0.07627 0.08398 0.1133 3.40% Castro::clean_state() 62 0.1062 0.1083 0.1106 3.32% Castro::computeInitialDt() 2 0.001812 0.04215 0.1029 3.09% FabArray::ParallelCopy_finish() 41 0.03358 0.04308 0.07886 2.37% FabArray::setVal() 143 0.05818 0.0693 0.07529 2.26% Castro::initialize_advance() 10 0.06093 0.07124 0.07479 2.25% Castro::computeTemp() 63 0.06791 0.06928 0.07112 2.14% Castro::do_new_sources() 10 0.05577 0.06129 0.06652 2.00% Castro::reset_internal_energy() 63 0.04911 0.05026 0.05168 1.55% Castro::do_old_sources() 10 0.03929 0.04576 0.04729 1.42% StateDataPhysBCFunct::() 41 0.03929 0.04134 0.04504 1.35% StateData::FillBoundary(geom) 41 0.03917 0.04122 0.04491 1.35% FabArray::ParallelCopy_nowait() 41 0.03434 0.04083 0.04265 1.28% Castro::normalize_species() 62 0.03228 0.03304 0.03406 1.02% Castro::construct_new_source() 50 0.02613 0.02979 0.03268 0.98% Gravity::interpolate_monopole_grav() 21 0.02777 0.02831 0.02959 0.89% Castro::post_init() 1 0.02665 0.02741 0.02776 0.83% Castro::construct_new_gravity_source() 10 0.02039 0.0234 0.02592 0.78% Amr::writePlotFile() 2 0.02258 0.0231 0.02378 0.71% Castro::apply_source_to_state() 20 0.01314 0.01477 0.01587 0.48% MultiFab::Saxpy() 20 0.0131 0.01472 0.01582 0.48% Castro::post_timestep() 10 0.01411 0.01454 0.0149 0.45% VisMF::Write(FabArray) 2 0.01082 0.01195 0.01453 0.44% Castro::check_for_nan() 20 0.01008 0.01093 0.01242 0.37% MultiFab::contains_nan() 20 0.01005 0.0109 0.01239 0.37% Castro::construct_old_source() 50 0.007069 0.01108 0.01195 0.36% Castro::construct_old_gravity_source() 10 0.007024 0.01101 0.01187 0.36% FabArray::setDomainBndry() 41 0.006931 0.01016 0.01172 0.35% Castro::computeNewDt() 9 0.00684 0.007496 0.008408 0.25% Castro::enforce_min_density() 62 0.006334 0.006773 0.00699 0.21% AmrLevel::AmrLevel(dm) 1 0.004351 0.005833 0.0063 0.19% StateData::define() 4 0.004342 0.00582 0.006288 0.19% Castro::swap_state_time_levels() 10 0.002359 0.003479 0.004152 0.12% Castro::post_regrid() 1 0.001423 0.001516 0.001835 0.06% Castro::finalize_do_advance() 10 0.0004613 0.0009726 0.001178 0.04% Amr::InitAmr() 1 0.0002992 0.000449 0.0006212 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.404e-05 0.0002021 0.0003615 0.01% DistributionMapping::LeastUsedCPUs() 1 8.533e-06 0.0001957 0.0003537 0.01% Castro::enforce_consistent_e() 1 7.918e-05 8.994e-05 9.999e-05 0.00% FabArrayBase::getCPC() 41 7.11e-05 8.085e-05 8.927e-05 0.00% Castro::finalize_advance() 10 5.992e-05 6.204e-05 6.48e-05 0.00% Amr::writeSmallPlotFile() 1 3.954e-05 5.366e-05 6.326e-05 0.00% Castro::enforce_speed_limit() 62 2.916e-05 3.302e-05 3.642e-05 0.00% FabArrayBase::CPC::define() 2 2.288e-05 2.572e-05 2.991e-05 0.00% Castro::create_source_corrector() 10 1.373e-05 1.691e-05 1.923e-05 0.00% Amr::initSubcycle() 1 9.224e-06 1.394e-05 1.626e-05 0.00% Gravity::swapTimeLevels() 10 8.155e-06 1.224e-05 1.384e-05 0.00% Castro::FluxRegFineAdd() 10 5.332e-06 7.285e-06 1.149e-05 0.00% Gravity::set_mass_offset() 10 7.228e-06 8.136e-06 1.008e-05 0.00% Castro::retry_advance_ctu() 10 5.685e-06 6.347e-06 8.131e-06 0.00% DistributionMapping::Distribute() 1 1.166e-06 1.385e-06 1.537e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-31-g619630d18031) finalized