MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-32-g1b73099a80e6) initialized Starting run at 23:19:27 UTC on 2022-03-27. Successfully read inputs file ... Castro git describe: 22.02-20-g203d91cae AMReX git describe: 22.03-32-g1b73099a8 Microphysics git describe: 22.03-13-gf58972c7 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012711102 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.328132995 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.331860532 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.305284575 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.309706082 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.3181008 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.354905811 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.305148174 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.299552376 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.299296552 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.300117715 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010352021 seconds Ending run at 23:19:30 UTC on 2022-03-27. Run time = 3.36335396 Run time without initialization = 3.166055334 Average number of zones advanced per microsecond: 0.828 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.363 ... 3.363 ... 3.363 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1157 2.1678 2.2142 65.83% Gravity::make_radial_gravity() 21 0.3471 0.3588 0.3692 10.98% MultiFab::min() 10 0.04666 0.09662 0.1501 4.46% Castro::initData() 1 0.03816 0.08074 0.1353 4.02% Castro::estTimeStep() 21 0.0215 0.08519 0.1332 3.96% FabArray::ParallelCopy_finish() 41 0.03445 0.0454 0.08701 2.59% FabArray::setVal() 143 0.05692 0.06761 0.07335 2.18% Castro::reset_internal_energy() 63 0.04813 0.05025 0.05293 1.57% Castro::normalize_species() 62 0.04279 0.04429 0.04562 1.36% StateData::FillBoundary(geom) 41 0.03789 0.04199 0.04551 1.35% FabArray::ParallelCopy_nowait() 41 0.03508 0.03906 0.04158 1.24% FillPatchIterator::Initialize 41 0.02295 0.02817 0.03176 0.94% Castro::construct_new_gravity_source() 10 0.02183 0.02481 0.02949 0.88% Gravity::interpolate_monopole_grav() 21 0.02762 0.02819 0.02914 0.87% Castro::do_advance_ctu() 10 0.01532 0.01856 0.0219 0.65% Castro::computeTemp() 63 0.01715 0.01874 0.01978 0.59% Castro::expand_state() 10 0.01221 0.01635 0.0195 0.58% Castro::initialize_do_advance() 10 0.01053 0.01535 0.01696 0.50% MultiFab::Saxpy() 20 0.01225 0.01424 0.01515 0.45% VisMF::Write(FabArray) 2 0.01134 0.01225 0.01508 0.45% Castro::initialize_advance() 10 0.00431 0.01049 0.01313 0.39% Gravity::get_new_grav_vector() 11 0.009379 0.01091 0.01247 0.37% Amr::writePlotFile() 2 0.008173 0.01119 0.01225 0.36% MultiFab::contains_nan() 20 0.0105 0.01134 0.01224 0.36% Castro::construct_old_gravity_source() 10 0.007914 0.011 0.01206 0.36% FabArray::setDomainBndry() 41 0.006972 0.009317 0.01106 0.33% Gravity::get_old_grav_vector() 10 0.007728 0.008666 0.009993 0.30% Amr::defBaseLevel() 1 0.006396 0.006874 0.007472 0.22% Castro::enforce_min_density() 62 0.006364 0.006794 0.00713 0.21% Castro::construct_new_source() 50 0.005945 0.006441 0.006866 0.20% StateData::define() 4 0.004347 0.004633 0.004881 0.15% main() 1 0.003653 0.003962 0.004353 0.13% Castro::swap_state_time_levels() 10 0.002455 0.003506 0.004113 0.12% Amr::coarseTimeStep() 10 0.0004127 0.0007007 0.001232 0.04% Castro::finalize_do_advance() 10 0.0004578 0.0008378 0.0009743 0.03% Amr::timeStep() 10 0.0001533 0.0002212 0.0004937 0.01% Amr::InitAmr() 1 0.0002589 0.00029 0.0003904 0.01% StateDataPhysBCFunct::() 41 0.0001118 0.000129 0.0001491 0.00% DistributionMapping::LeastUsedCPUs() 1 6.861e-06 0.000115 0.0001479 0.00% Castro::clean_state() 62 0.0001206 0.0001357 0.000144 0.00% Castro::enforce_consistent_e() 1 8.135e-05 9.046e-05 0.0001143 0.00% Castro::construct_old_source() 50 6.205e-05 7.913e-05 9.053e-05 0.00% FillPatchSingleLevel 41 5.854e-05 6.718e-05 8.463e-05 0.00% Castro::do_old_sources() 10 5.189e-05 6.062e-05 8.269e-05 0.00% Amr::FinalizeInit() 1 3.892e-06 1.398e-05 8.048e-05 0.00% FabArrayBase::getCPC() 41 4.836e-05 5.595e-05 7.946e-05 0.00% FabArray::ParallelCopy() 41 6.459e-05 7.218e-05 7.865e-05 0.00% Castro::do_new_sources() 10 5.339e-05 6.125e-05 7.226e-05 0.00% Amr::writeSmallPlotFile() 1 3.142e-05 5.856e-05 7.123e-05 0.00% Castro::subcycle_advance_ctu() 10 4.175e-05 5.122e-05 6.466e-05 0.00% Castro::finalize_advance() 10 5.149e-05 5.52e-05 6.229e-05 0.00% Castro::construct_old_gravity() 10 4.333e-05 5.072e-05 5.858e-05 0.00% Castro::construct_new_gravity() 10 3.899e-05 4.931e-05 5.525e-05 0.00% Castro::advance() 10 3.834e-05 4.403e-05 5.516e-05 0.00% Castro::apply_source_to_state() 20 4.606e-05 4.689e-05 4.881e-05 0.00% Castro::enforce_speed_limit() 62 3.029e-05 3.605e-05 4.678e-05 0.00% FabArrayBase::CPC::define() 2 2.276e-05 2.768e-05 4.181e-05 0.00% Castro::check_for_nan() 20 2.236e-05 2.766e-05 3.196e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.198e-05 1.899e-05 3.157e-05 0.00% Castro::create_source_corrector() 10 1.389e-05 1.758e-05 2.116e-05 0.00% Castro::post_timestep() 10 9.163e-06 1.06e-05 1.566e-05 0.00% Gravity::swapTimeLevels() 10 1.131e-05 1.347e-05 1.547e-05 0.00% Amr::initSubcycle() 1 8.178e-06 9.061e-06 9.522e-06 0.00% Gravity::set_mass_offset() 10 8.09e-06 8.501e-06 9.437e-06 0.00% Castro::computeNewDt() 9 6.978e-06 7.989e-06 9.308e-06 0.00% Castro::FluxRegFineAdd() 10 5.281e-06 6.368e-06 9.12e-06 0.00% Castro::post_init() 1 3.234e-06 4.57e-06 8.881e-06 0.00% Castro::retry_advance_ctu() 10 4.419e-06 5.91e-06 6.846e-06 0.00% Amr::InitializeInit() 1 2.143e-06 3.393e-06 6.519e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.888e-06 4.421e-06 5.547e-06 0.00% Castro::computeInitialDt() 2 2.836e-06 3.891e-06 4.603e-06 0.00% Castro::post_regrid() 1 2.076e-06 3.066e-06 4.544e-06 0.00% Amr::init() 1 1.785e-06 2.057e-06 2.871e-06 0.00% Amr::initialInit() 1 1.198e-06 1.524e-06 1.79e-06 0.00% DistributionMapping::Distribute() 1 1.101e-06 1.287e-06 1.474e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.363 3.363 3.363 100.00% Amr::coarseTimeStep() 10 3.151 3.151 3.151 93.70% Amr::timeStep() 10 3.142 3.142 3.142 93.43% Castro::advance() 10 3.126 3.126 3.126 92.95% Castro::subcycle_advance_ctu() 10 3.051 3.056 3.073 91.36% Castro::do_advance_ctu() 10 3.051 3.056 3.073 91.36% Castro::construct_ctu_hydro_source() 10 2.116 2.168 2.214 65.83% Gravity::make_radial_gravity() 21 0.3471 0.3588 0.3692 10.98% Gravity::get_new_grav_vector() 11 0.2287 0.2298 0.2315 6.88% Castro::construct_old_gravity() 10 0.2046 0.2142 0.2233 6.64% Gravity::get_old_grav_vector() 10 0.2038 0.2135 0.2227 6.62% Castro::construct_new_gravity() 10 0.2036 0.2042 0.2056 6.11% Amr::init() 1 0.1967 0.1969 0.1969 5.85% FillPatchIterator::Initialize 41 0.15 0.1643 0.1948 5.79% Amr::initialInit() 1 0.1837 0.1838 0.1841 5.47% FillPatchSingleLevel 41 0.1183 0.1268 0.1648 4.90% Castro::initialize_do_advance() 10 0.1416 0.1521 0.164 4.88% Amr::InitializeInit() 1 0.05665 0.09898 0.1546 4.60% Amr::defBaseLevel() 1 0.05665 0.09897 0.1546 4.60% MultiFab::min() 10 0.04666 0.09662 0.1501 4.46% Castro::initData() 1 0.04195 0.08477 0.1396 4.15% Castro::estTimeStep() 21 0.0215 0.08519 0.1332 3.96% Amr::FinalizeInit() 1 0.02942 0.08486 0.127 3.78% Castro::clean_state() 62 0.1146 0.1193 0.1242 3.69% Castro::expand_state() 10 0.09385 0.1048 0.1239 3.68% FabArray::ParallelCopy() 41 0.07407 0.08462 0.1223 3.64% Castro::computeInitialDt() 2 0.001924 0.0576 0.09993 2.97% FabArray::ParallelCopy_finish() 41 0.03445 0.0454 0.08701 2.59% Castro::initialize_advance() 10 0.05276 0.06999 0.07526 2.24% FabArray::setVal() 143 0.05692 0.06761 0.07335 2.18% Castro::computeTemp() 63 0.06527 0.06899 0.07248 2.16% Castro::do_new_sources() 10 0.05848 0.06396 0.07182 2.14% Castro::reset_internal_energy() 63 0.04813 0.05025 0.05293 1.57% Castro::do_old_sources() 10 0.04267 0.04737 0.05097 1.52% StateDataPhysBCFunct::() 41 0.03802 0.04212 0.04565 1.36% Castro::normalize_species() 62 0.04279 0.04429 0.04562 1.36% StateData::FillBoundary(geom) 41 0.03789 0.04199 0.04551 1.35% FabArray::ParallelCopy_nowait() 41 0.0352 0.03914 0.04165 1.24% Castro::construct_new_source() 50 0.02777 0.03125 0.03636 1.08% Castro::construct_new_gravity_source() 10 0.02183 0.02481 0.02949 0.88% Gravity::interpolate_monopole_grav() 21 0.02762 0.02819 0.02914 0.87% Castro::post_init() 1 0.02645 0.02664 0.0268 0.80% Amr::writePlotFile() 2 0.0232 0.02344 0.02359 0.70% Castro::post_timestep() 10 0.01542 0.01579 0.0161 0.48% Castro::apply_source_to_state() 20 0.0123 0.01428 0.0152 0.45% MultiFab::Saxpy() 20 0.01225 0.01424 0.01515 0.45% VisMF::Write(FabArray) 2 0.01134 0.01225 0.01508 0.45% Castro::check_for_nan() 20 0.01053 0.01137 0.01227 0.36% MultiFab::contains_nan() 20 0.0105 0.01134 0.01224 0.36% Castro::construct_old_source() 50 0.007977 0.01108 0.01215 0.36% Castro::construct_old_gravity_source() 10 0.007914 0.011 0.01206 0.36% FabArray::setDomainBndry() 41 0.006972 0.009317 0.01106 0.33% Castro::computeNewDt() 9 0.006771 0.007586 0.008174 0.24% Castro::enforce_min_density() 62 0.006364 0.006794 0.00713 0.21% AmrLevel::AmrLevel(dm) 1 0.00436 0.004652 0.004904 0.15% StateData::define() 4 0.004347 0.004633 0.004881 0.15% Castro::swap_state_time_levels() 10 0.002455 0.003506 0.004113 0.12% Castro::post_regrid() 1 0.001374 0.001607 0.001948 0.06% Castro::finalize_do_advance() 10 0.0004578 0.0008378 0.0009743 0.03% Amr::InitAmr() 1 0.0002676 0.0002991 0.0003993 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.198e-05 0.0001208 0.0001545 0.00% DistributionMapping::LeastUsedCPUs() 1 6.861e-06 0.000115 0.0001479 0.00% FabArrayBase::getCPC() 41 7.112e-05 8.364e-05 0.0001213 0.00% Castro::enforce_consistent_e() 1 8.135e-05 9.046e-05 0.0001143 0.00% Castro::finalize_advance() 10 5.727e-05 6.156e-05 7.141e-05 0.00% Amr::writeSmallPlotFile() 1 3.142e-05 5.856e-05 7.123e-05 0.00% Castro::enforce_speed_limit() 62 3.029e-05 3.605e-05 4.678e-05 0.00% FabArrayBase::CPC::define() 2 2.276e-05 2.768e-05 4.181e-05 0.00% Castro::create_source_corrector() 10 1.389e-05 1.758e-05 2.116e-05 0.00% Gravity::swapTimeLevels() 10 1.131e-05 1.347e-05 1.547e-05 0.00% Amr::initSubcycle() 1 8.178e-06 9.061e-06 9.522e-06 0.00% Gravity::set_mass_offset() 10 8.09e-06 8.501e-06 9.437e-06 0.00% Castro::FluxRegFineAdd() 10 5.281e-06 6.368e-06 9.12e-06 0.00% Castro::retry_advance_ctu() 10 4.419e-06 5.91e-06 6.846e-06 0.00% DistributionMapping::Distribute() 1 1.101e-06 1.287e-06 1.474e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-32-g1b73099a80e6) finalized