MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-32-g1b73099a80e6) initialized Starting run at 20:01:23 UTC on 2022-03-27. Successfully read inputs file ... Castro git describe: 22.02-19-gecc139e06 AMReX git describe: 22.03-32-g1b73099a8 Microphysics git describe: 22.03-13-gf58972c7 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013051195 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.335839722 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.341326154 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.319093825 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.337635883 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.315693313 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.343055965 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.297496663 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.291779939 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.292835089 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.292836421 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009572791 seconds Ending run at 20:01:26 UTC on 2022-03-27. Run time = 3.374809387 Run time without initialization = 3.181797854 Average number of zones advanced per microsecond: 0.824 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.374 ... 3.375 ... 3.375 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0938 2.1919 2.2590 66.94% Gravity::make_radial_gravity() 21 0.3338 0.3431 0.3541 10.49% MultiFab::min() 10 0.02811 0.09766 0.2007 5.95% Castro::initData() 1 0.03963 0.0813 0.1309 3.88% Castro::estTimeStep() 21 0.01703 0.0716 0.1163 3.45% FabArray::setVal() 143 0.06951 0.073 0.07754 2.30% FabArray::ParallelCopy_finish() 41 0.03351 0.04102 0.05929 1.76% Castro::reset_internal_energy() 63 0.04872 0.04995 0.05139 1.52% Castro::normalize_species() 62 0.0428 0.04353 0.04443 1.32% StateData::FillBoundary(geom) 41 0.0389 0.04182 0.04441 1.32% FabArray::ParallelCopy_nowait() 41 0.03814 0.04133 0.04343 1.29% FillPatchIterator::Initialize 41 0.02388 0.03107 0.03434 1.02% Gravity::interpolate_monopole_grav() 21 0.02743 0.02793 0.02839 0.84% Castro::construct_new_gravity_source() 10 0.02301 0.02449 0.02651 0.79% Castro::do_advance_ctu() 10 0.01861 0.02103 0.02394 0.71% Castro::expand_state() 10 0.01331 0.0184 0.02091 0.62% Castro::computeTemp() 63 0.01835 0.01877 0.01919 0.57% Castro::initialize_do_advance() 10 0.01097 0.01632 0.01777 0.53% MultiFab::Saxpy() 20 0.01436 0.01542 0.01654 0.49% Castro::initialize_advance() 10 0.01062 0.01225 0.01454 0.43% VisMF::Write(FabArray) 2 0.01158 0.0121 0.01446 0.43% Gravity::get_new_grav_vector() 11 0.01059 0.01157 0.01296 0.38% Castro::construct_old_gravity_source() 10 0.008888 0.01132 0.01207 0.36% MultiFab::contains_nan() 20 0.01056 0.01117 0.01194 0.35% FabArray::setDomainBndry() 41 0.007037 0.01033 0.01172 0.35% Amr::writePlotFile() 2 0.008405 0.01067 0.01136 0.34% Gravity::get_old_grav_vector() 10 0.007723 0.009299 0.01025 0.30% Amr::defBaseLevel() 1 0.00654 0.007088 0.007626 0.23% Castro::construct_new_source() 50 0.006539 0.006683 0.006888 0.20% Castro::enforce_min_density() 62 0.005805 0.005991 0.00639 0.19% StateData::define() 4 0.004316 0.004607 0.004897 0.15% main() 1 0.003398 0.004164 0.004509 0.13% Castro::swap_state_time_levels() 10 0.002903 0.003814 0.004289 0.13% Castro::finalize_do_advance() 10 0.001036 0.001225 0.00134 0.04% Amr::coarseTimeStep() 10 0.0004283 0.0006473 0.0009888 0.03% Amr::timeStep() 10 0.0001587 0.0002187 0.0004976 0.01% Amr::InitAmr() 1 0.0002545 0.0002877 0.0004074 0.01% DistributionMapping::LeastUsedCPUs() 1 7.615e-06 0.0001416 0.0001744 0.01% Castro::clean_state() 62 0.0001222 0.0001347 0.0001647 0.00% StateDataPhysBCFunct::() 41 0.0001232 0.0001349 0.0001615 0.00% Castro::enforce_consistent_e() 1 7.403e-05 8.932e-05 0.0001051 0.00% Amr::FinalizeInit() 1 3.412e-06 1.709e-05 0.0001042 0.00% Castro::construct_old_source() 50 6.383e-05 8.193e-05 9.303e-05 0.00% FillPatchSingleLevel 41 6.684e-05 7.377e-05 8.935e-05 0.00% FabArray::ParallelCopy() 41 6.829e-05 7.296e-05 7.82e-05 0.00% Castro::do_old_sources() 10 5.388e-05 6.386e-05 7.068e-05 0.00% Castro::subcycle_advance_ctu() 10 4.738e-05 5.74e-05 6.97e-05 0.00% Amr::writeSmallPlotFile() 1 2.984e-05 5.04e-05 6.763e-05 0.00% FabArrayBase::getCPC() 41 4.572e-05 5.339e-05 6.577e-05 0.00% Castro::do_new_sources() 10 5.403e-05 6.15e-05 6.531e-05 0.00% Castro::construct_new_gravity() 10 3.643e-05 5.119e-05 6.206e-05 0.00% Castro::construct_old_gravity() 10 5.313e-05 5.682e-05 6.12e-05 0.00% Castro::apply_source_to_state() 20 4.426e-05 5.078e-05 5.668e-05 0.00% Castro::finalize_advance() 10 4.875e-05 5.214e-05 5.611e-05 0.00% Castro::advance() 10 3.393e-05 3.917e-05 4.946e-05 0.00% Castro::enforce_speed_limit() 62 2.985e-05 3.308e-05 4.36e-05 0.00% FabArrayBase::CPC::define() 2 2.263e-05 2.723e-05 3.618e-05 0.00% Castro::check_for_nan() 20 2.278e-05 2.504e-05 2.764e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.834e-05 2.03e-05 2.534e-05 0.00% Castro::create_source_corrector() 10 1.484e-05 1.735e-05 1.992e-05 0.00% Gravity::swapTimeLevels() 10 1.148e-05 1.404e-05 1.709e-05 0.00% Amr::initSubcycle() 1 8.169e-06 9.341e-06 1.326e-05 0.00% Castro::post_timestep() 10 8.949e-06 9.471e-06 1.043e-05 0.00% Castro::post_init() 1 3.374e-06 4.535e-06 9.582e-06 0.00% Gravity::set_mass_offset() 10 7.049e-06 7.909e-06 8.633e-06 0.00% Castro::computeNewDt() 9 6.515e-06 7.705e-06 8.364e-06 0.00% Castro::FluxRegFineAdd() 10 5.248e-06 6.707e-06 7.874e-06 0.00% Amr::InitializeInit() 1 2.044e-06 2.909e-06 7.384e-06 0.00% Castro::retry_advance_ctu() 10 5.071e-06 6.162e-06 7.022e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.833e-06 4.624e-06 5.677e-06 0.00% Castro::computeInitialDt() 2 3.006e-06 3.866e-06 4.961e-06 0.00% Castro::post_regrid() 1 1.678e-06 2.739e-06 3.674e-06 0.00% Amr::init() 1 1.913e-06 2.257e-06 2.611e-06 0.00% Amr::initialInit() 1 1.031e-06 1.4e-06 1.741e-06 0.00% DistributionMapping::Distribute() 1 9.74e-07 1.068e-06 1.324e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.374 3.375 3.375 100.00% Amr::coarseTimeStep() 10 3.168 3.168 3.168 93.86% Amr::timeStep() 10 3.158 3.159 3.159 93.61% Castro::advance() 10 3.143 3.143 3.143 93.13% Castro::subcycle_advance_ctu() 10 3.064 3.067 3.07 90.97% Castro::do_advance_ctu() 10 3.064 3.067 3.07 90.97% Castro::construct_ctu_hydro_source() 10 2.094 2.192 2.259 66.94% Gravity::make_radial_gravity() 21 0.3338 0.3431 0.3541 10.49% Gravity::get_new_grav_vector() 11 0.2239 0.2257 0.2267 6.72% Castro::construct_old_gravity() 10 0.1974 0.2043 0.2135 6.33% Gravity::get_old_grav_vector() 10 0.1966 0.2035 0.2128 6.31% MultiFab::min() 10 0.02811 0.09766 0.2007 5.95% Castro::construct_new_gravity() 10 0.1985 0.1994 0.2001 5.93% Amr::init() 1 0.1924 0.1926 0.1926 5.71% Amr::initialInit() 1 0.1792 0.1795 0.1797 5.32% FillPatchIterator::Initialize 41 0.1618 0.1659 0.1682 4.98% Castro::initialize_do_advance() 10 0.1473 0.1558 0.1596 4.73% Amr::InitializeInit() 1 0.0584 0.09965 0.1498 4.44% Amr::defBaseLevel() 1 0.0584 0.09964 0.1498 4.44% FillPatchSingleLevel 41 0.1183 0.1245 0.1367 4.05% Castro::initData() 1 0.04319 0.08539 0.1346 3.99% Amr::FinalizeInit() 1 0.02973 0.07983 0.1211 3.59% Castro::clean_state() 62 0.1155 0.1175 0.1197 3.55% Castro::estTimeStep() 21 0.01703 0.0716 0.1163 3.45% Castro::expand_state() 10 0.0997 0.1083 0.111 3.29% FabArray::ParallelCopy() 41 0.07627 0.0825 0.0976 2.89% Castro::computeInitialDt() 2 0.00171 0.05188 0.09313 2.76% Castro::initialize_advance() 10 0.07221 0.0752 0.07838 2.32% FabArray::setVal() 143 0.06951 0.073 0.07754 2.30% Castro::computeTemp() 63 0.06745 0.06872 0.07049 2.09% Castro::do_new_sources() 10 0.06217 0.06529 0.06911 2.05% FabArray::ParallelCopy_finish() 41 0.03351 0.04102 0.05929 1.76% Castro::reset_internal_energy() 63 0.04872 0.04995 0.05139 1.52% Castro::do_old_sources() 10 0.04632 0.04848 0.04901 1.45% StateDataPhysBCFunct::() 41 0.03903 0.04196 0.04455 1.32% Castro::normalize_species() 62 0.0428 0.04353 0.04443 1.32% StateData::FillBoundary(geom) 41 0.0389 0.04182 0.04441 1.32% FabArray::ParallelCopy_nowait() 41 0.03823 0.04141 0.0435 1.29% Castro::construct_new_source() 50 0.02955 0.03117 0.03321 0.98% Gravity::interpolate_monopole_grav() 21 0.02743 0.02793 0.02839 0.84% Castro::post_init() 1 0.02687 0.02728 0.0276 0.82% Castro::construct_new_gravity_source() 10 0.02301 0.02449 0.02651 0.79% Amr::writePlotFile() 2 0.0226 0.02277 0.02303 0.68% Castro::apply_source_to_state() 20 0.0144 0.01547 0.0166 0.49% MultiFab::Saxpy() 20 0.01436 0.01542 0.01654 0.49% Castro::post_timestep() 10 0.01538 0.01573 0.0161 0.48% VisMF::Write(FabArray) 2 0.01158 0.0121 0.01446 0.43% Castro::construct_old_source() 50 0.008952 0.0114 0.01216 0.36% Castro::construct_old_gravity_source() 10 0.008888 0.01132 0.01207 0.36% Castro::check_for_nan() 20 0.01059 0.01119 0.01196 0.35% MultiFab::contains_nan() 20 0.01056 0.01117 0.01194 0.35% FabArray::setDomainBndry() 41 0.007037 0.01033 0.01172 0.35% Castro::computeNewDt() 9 0.006822 0.007334 0.00784 0.23% Castro::enforce_min_density() 62 0.005805 0.005991 0.00639 0.19% AmrLevel::AmrLevel(dm) 1 0.004335 0.004628 0.004916 0.15% StateData::define() 4 0.004316 0.004607 0.004897 0.15% Castro::swap_state_time_levels() 10 0.002903 0.003814 0.004289 0.13% Castro::post_regrid() 1 0.001528 0.001666 0.001973 0.06% Castro::finalize_do_advance() 10 0.001036 0.001225 0.00134 0.04% Amr::InitAmr() 1 0.0002633 0.0002971 0.0004206 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.31e-05 0.0001473 0.0001814 0.01% DistributionMapping::LeastUsedCPUs() 1 7.615e-06 0.0001416 0.0001744 0.01% Castro::enforce_consistent_e() 1 7.403e-05 8.932e-05 0.0001051 0.00% FabArrayBase::getCPC() 41 7.233e-05 8.063e-05 9.243e-05 0.00% Amr::writeSmallPlotFile() 1 2.984e-05 5.04e-05 6.763e-05 0.00% Castro::finalize_advance() 10 5.629e-05 5.884e-05 6.202e-05 0.00% Castro::enforce_speed_limit() 62 2.985e-05 3.308e-05 4.36e-05 0.00% FabArrayBase::CPC::define() 2 2.263e-05 2.723e-05 3.618e-05 0.00% Castro::create_source_corrector() 10 1.484e-05 1.735e-05 1.992e-05 0.00% Gravity::swapTimeLevels() 10 1.148e-05 1.404e-05 1.709e-05 0.00% Amr::initSubcycle() 1 8.169e-06 9.341e-06 1.326e-05 0.00% Gravity::set_mass_offset() 10 7.049e-06 7.909e-06 8.633e-06 0.00% Castro::FluxRegFineAdd() 10 5.248e-06 6.707e-06 7.874e-06 0.00% Castro::retry_advance_ctu() 10 5.071e-06 6.162e-06 7.022e-06 0.00% DistributionMapping::Distribute() 1 9.74e-07 1.068e-06 1.324e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-32-g1b73099a80e6) finalized