MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-32-g1b73099a80e6) initialized Starting run at 05:36:52 UTC on 2022-03-28. Successfully read inputs file ... Castro git describe: 22.02-19-ga92ac477d AMReX git describe: 22.03-32-g1b73099a8 Microphysics git describe: 22.03-13-gf58972c7 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014130179 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.332108804 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.325708993 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.311978126 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.310312366 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.310360289 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.338441688 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.30004725 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.293795919 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.292376268 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.29231276 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009998098 seconds Ending run at 05:36:56 UTC on 2022-03-28. Run time = 3.333593733 Run time without initialization = 3.121446965 Average number of zones advanced per microsecond: 0.840 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.333 ... 3.333 ... 3.334 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1300 2.1757 2.2227 66.68% Gravity::make_radial_gravity() 21 0.3315 0.3473 0.3595 10.78% Castro::initData() 1 0.03961 0.09397 0.1432 4.30% Castro::estTimeStep() 21 0.02234 0.07434 0.1382 4.15% MultiFab::min() 10 0.008431 0.06096 0.1093 3.28% FabArray::setVal() 143 0.0675 0.07215 0.07769 2.33% FabArray::ParallelCopy_finish() 41 0.03312 0.03877 0.06223 1.87% Castro::reset_internal_energy() 63 0.04823 0.05047 0.05189 1.56% StateData::FillBoundary(geom) 41 0.03842 0.04142 0.04505 1.35% Castro::normalize_species() 62 0.04304 0.04368 0.0444 1.33% FabArray::ParallelCopy_nowait() 41 0.0342 0.03975 0.04275 1.28% FillPatchIterator::Initialize 41 0.02393 0.02898 0.03213 0.96% Gravity::interpolate_monopole_grav() 21 0.02777 0.02817 0.02863 0.86% Castro::construct_new_gravity_source() 10 0.0212 0.02358 0.02626 0.79% Castro::do_advance_ctu() 10 0.01669 0.01961 0.02313 0.69% Castro::expand_state() 10 0.01216 0.01702 0.02011 0.60% Castro::computeTemp() 63 0.01843 0.01902 0.0199 0.60% Castro::initialize_do_advance() 10 0.01064 0.01607 0.01828 0.55% VisMF::Write(FabArray) 2 0.01255 0.01319 0.01607 0.48% MultiFab::Saxpy() 20 0.0135 0.01538 0.01604 0.48% Castro::initialize_advance() 10 0.01074 0.01264 0.01509 0.45% Gravity::get_new_grav_vector() 11 0.009666 0.01076 0.01326 0.40% MultiFab::contains_nan() 20 0.01048 0.01145 0.01266 0.38% Amr::writePlotFile() 2 0.008259 0.01119 0.01198 0.36% Castro::construct_old_gravity_source() 10 0.007242 0.01089 0.01171 0.35% FabArray::setDomainBndry() 41 0.00671 0.009607 0.01113 0.33% Gravity::get_old_grav_vector() 10 0.006792 0.008496 0.009696 0.29% Amr::defBaseLevel() 1 0.006629 0.008933 0.009647 0.29% StateData::define() 4 0.0043 0.006111 0.007075 0.21% Castro::construct_new_source() 50 0.00606 0.006513 0.006884 0.21% Castro::enforce_min_density() 62 0.005758 0.006166 0.006537 0.20% main() 1 0.003283 0.003606 0.003969 0.12% Castro::swap_state_time_levels() 10 0.002931 0.003722 0.00393 0.12% Amr::coarseTimeStep() 10 0.0002938 0.0006458 0.001167 0.04% Castro::finalize_do_advance() 10 0.0004603 0.0008183 0.0009365 0.03% Amr::InitAmr() 1 0.0002944 0.000425 0.0005233 0.02% Amr::timeStep() 10 0.000165 0.000224 0.0004563 0.01% Amr::writeSmallPlotFile() 1 2.421e-05 8.002e-05 0.0003243 0.01% DistributionMapping::LeastUsedCPUs() 1 7.446e-06 0.0001265 0.0002873 0.01% Castro::clean_state() 62 0.0001236 0.0001412 0.0001698 0.01% StateDataPhysBCFunct::() 41 0.0001214 0.0001296 0.0001425 0.00% Castro::enforce_consistent_e() 1 8.139e-05 8.647e-05 9.169e-05 0.00% Castro::construct_old_source() 50 6.657e-05 8.027e-05 8.945e-05 0.00% FillPatchSingleLevel 41 5.888e-05 6.751e-05 7.899e-05 0.00% FabArray::ParallelCopy() 41 6.535e-05 7.321e-05 7.853e-05 0.00% Castro::subcycle_advance_ctu() 10 3.698e-05 5.438e-05 7.346e-05 0.00% FabArrayBase::getCPC() 41 4.852e-05 5.755e-05 7.274e-05 0.00% Amr::FinalizeInit() 1 3.763e-06 1.304e-05 7.086e-05 0.00% Castro::do_old_sources() 10 4.907e-05 6.02e-05 7.063e-05 0.00% Castro::do_new_sources() 10 5.333e-05 6.082e-05 6.595e-05 0.00% Castro::construct_new_gravity() 10 3.846e-05 5.095e-05 6.362e-05 0.00% Castro::construct_old_gravity() 10 5.278e-05 5.728e-05 6.327e-05 0.00% Castro::finalize_advance() 10 4.984e-05 5.343e-05 5.759e-05 0.00% Castro::apply_source_to_state() 20 5.024e-05 5.445e-05 5.728e-05 0.00% Castro::advance() 10 3.576e-05 4.247e-05 5.301e-05 0.00% Castro::enforce_speed_limit() 62 2.575e-05 3.215e-05 3.992e-05 0.00% FabArrayBase::CPC::define() 2 2.313e-05 2.599e-05 3.38e-05 0.00% Castro::check_for_nan() 20 2.278e-05 2.72e-05 2.954e-05 0.00% Gravity::swapTimeLevels() 10 1.29e-05 1.648e-05 2.591e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.607e-05 2.119e-05 2.398e-05 0.00% Castro::create_source_corrector() 10 1.586e-05 1.747e-05 2.142e-05 0.00% Amr::initSubcycle() 1 8.217e-06 1.357e-05 1.682e-05 0.00% Castro::post_timestep() 10 7.834e-06 9.463e-06 1.074e-05 0.00% Castro::computeNewDt() 9 6.919e-06 8.239e-06 9.403e-06 0.00% Gravity::set_mass_offset() 10 6.956e-06 8.208e-06 9.38e-06 0.00% Castro::FluxRegFineAdd() 10 5.945e-06 6.477e-06 7.667e-06 0.00% Castro::retry_advance_ctu() 10 4.898e-06 5.924e-06 6.829e-06 0.00% Amr::InitializeInit() 1 2.454e-06 4.109e-06 6.758e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.372e-06 5.18e-06 6.046e-06 0.00% Castro::post_init() 1 2.953e-06 3.823e-06 4.835e-06 0.00% Castro::post_regrid() 1 2.397e-06 3.362e-06 4.277e-06 0.00% Castro::computeInitialDt() 2 2.756e-06 3.508e-06 4.095e-06 0.00% Amr::init() 1 2.136e-06 2.522e-06 3.583e-06 0.00% DistributionMapping::Distribute() 1 1.195e-06 1.421e-06 1.924e-06 0.00% Amr::initialInit() 1 1.413e-06 1.593e-06 1.83e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.333 3.333 3.334 100.00% Amr::coarseTimeStep() 10 3.108 3.108 3.108 93.22% Amr::timeStep() 10 3.098 3.099 3.099 92.96% Castro::advance() 10 3.082 3.082 3.082 92.47% Castro::subcycle_advance_ctu() 10 3.002 3.005 3.009 90.26% Castro::do_advance_ctu() 10 3.002 3.005 3.009 90.26% Castro::construct_ctu_hydro_source() 10 2.13 2.176 2.223 66.68% Gravity::make_radial_gravity() 21 0.3315 0.3473 0.3595 10.78% Gravity::get_new_grav_vector() 11 0.2222 0.2241 0.2254 6.76% Castro::construct_old_gravity() 10 0.1949 0.2075 0.2188 6.56% Gravity::get_old_grav_vector() 10 0.1941 0.2068 0.2181 6.54% Amr::init() 1 0.2114 0.2116 0.2117 6.35% Castro::construct_new_gravity() 10 0.1961 0.1972 0.1984 5.95% Amr::initialInit() 1 0.197 0.1972 0.1974 5.92% Amr::InitializeInit() 1 0.05552 0.1154 0.1668 5.00% Amr::defBaseLevel() 1 0.05552 0.1154 0.1668 5.00% FillPatchIterator::Initialize 41 0.149 0.1589 0.1659 4.98% Castro::initialize_do_advance() 10 0.1398 0.1505 0.1581 4.74% Castro::initData() 1 0.04312 0.09782 0.1474 4.42% Amr::FinalizeInit() 1 0.03057 0.08183 0.1419 4.26% Castro::estTimeStep() 21 0.02234 0.07434 0.1382 4.15% FillPatchSingleLevel 41 0.114 0.1203 0.1352 4.06% Castro::clean_state() 62 0.1156 0.1186 0.1211 3.63% Castro::computeInitialDt() 2 0.00177 0.05328 0.1133 3.40% Castro::expand_state() 10 0.09696 0.103 0.1096 3.29% MultiFab::min() 10 0.008431 0.06096 0.1093 3.28% FabArray::ParallelCopy() 41 0.07359 0.07868 0.09661 2.90% Castro::initialize_advance() 10 0.07327 0.07685 0.08002 2.40% FabArray::setVal() 143 0.0675 0.07215 0.07769 2.33% Castro::computeTemp() 63 0.06667 0.06948 0.0712 2.14% Castro::do_new_sources() 10 0.05991 0.06353 0.06848 2.05% FabArray::ParallelCopy_finish() 41 0.03312 0.03877 0.06223 1.87% Castro::reset_internal_energy() 63 0.04823 0.05047 0.05189 1.56% Castro::do_old_sources() 10 0.04262 0.04752 0.04914 1.47% StateDataPhysBCFunct::() 41 0.03855 0.04155 0.0452 1.36% StateData::FillBoundary(geom) 41 0.03842 0.04142 0.04505 1.35% Castro::normalize_species() 62 0.04304 0.04368 0.0444 1.33% FabArray::ParallelCopy_nowait() 41 0.0343 0.03984 0.04283 1.28% Castro::construct_new_source() 50 0.02726 0.03009 0.03303 0.99% Gravity::interpolate_monopole_grav() 21 0.02777 0.02817 0.02863 0.86% Castro::post_init() 1 0.02762 0.02779 0.02801 0.84% Castro::construct_new_gravity_source() 10 0.0212 0.02358 0.02626 0.79% Amr::writePlotFile() 2 0.02414 0.02438 0.02459 0.74% Castro::post_timestep() 10 0.01576 0.01605 0.01642 0.49% Castro::apply_source_to_state() 20 0.01355 0.01544 0.01609 0.48% VisMF::Write(FabArray) 2 0.01255 0.01319 0.01607 0.48% MultiFab::Saxpy() 20 0.0135 0.01538 0.01604 0.48% Castro::check_for_nan() 20 0.01051 0.01148 0.01268 0.38% MultiFab::contains_nan() 20 0.01048 0.01145 0.01266 0.38% Castro::construct_old_source() 50 0.007309 0.01097 0.0118 0.35% Castro::construct_old_gravity_source() 10 0.007242 0.01089 0.01171 0.35% FabArray::setDomainBndry() 41 0.00671 0.009607 0.01113 0.33% Castro::computeNewDt() 9 0.006835 0.007326 0.00767 0.23% AmrLevel::AmrLevel(dm) 1 0.004316 0.006132 0.007097 0.21% StateData::define() 4 0.0043 0.006111 0.007075 0.21% Castro::enforce_min_density() 62 0.005758 0.006166 0.006537 0.20% Castro::swap_state_time_levels() 10 0.002931 0.003722 0.00393 0.12% Castro::post_regrid() 1 0.001624 0.001688 0.001839 0.06% Castro::finalize_do_advance() 10 0.0004603 0.0008183 0.0009365 0.03% Amr::InitAmr() 1 0.000305 0.0004386 0.0005396 0.02% Amr::writeSmallPlotFile() 1 2.421e-05 8.002e-05 0.0003243 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.409e-05 0.0001331 0.0002946 0.01% DistributionMapping::LeastUsedCPUs() 1 7.446e-06 0.0001265 0.0002873 0.01% FabArrayBase::getCPC() 41 7.226e-05 8.354e-05 0.000101 0.00% Castro::enforce_consistent_e() 1 8.139e-05 8.647e-05 9.169e-05 0.00% Castro::finalize_advance() 10 5.578e-05 5.991e-05 6.417e-05 0.00% Castro::enforce_speed_limit() 62 2.575e-05 3.215e-05 3.992e-05 0.00% FabArrayBase::CPC::define() 2 2.313e-05 2.599e-05 3.38e-05 0.00% Gravity::swapTimeLevels() 10 1.29e-05 1.648e-05 2.591e-05 0.00% Castro::create_source_corrector() 10 1.586e-05 1.747e-05 2.142e-05 0.00% Amr::initSubcycle() 1 8.217e-06 1.357e-05 1.682e-05 0.00% Gravity::set_mass_offset() 10 6.956e-06 8.208e-06 9.38e-06 0.00% Castro::FluxRegFineAdd() 10 5.945e-06 6.477e-06 7.667e-06 0.00% Castro::retry_advance_ctu() 10 4.898e-06 5.924e-06 6.829e-06 0.00% DistributionMapping::Distribute() 1 1.195e-06 1.421e-06 1.924e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-32-g1b73099a80e6) finalized