MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-33-g9907ac197518) initialized Starting run at 05:36:41 UTC on 2022-03-29. Successfully read inputs file ... Castro git describe: 22.02-19-ga92ac477d AMReX git describe: 22.03-33-g9907ac197 Microphysics git describe: 22.03-13-gf58972c7 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012965201 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.337826902 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.325972696 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.342020329 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.316288162 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.316361261 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.343457871 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.297939307 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.29401116 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.292025661 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.292885251 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009690535 seconds Ending run at 05:36:45 UTC on 2022-03-29. Run time = 3.366835094 Run time without initialization = 3.172209991 Average number of zones advanced per microsecond: 0.826 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.366 ... 3.367 ... 3.367 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1258 2.1809 2.2323 66.30% Gravity::make_radial_gravity() 21 0.3284 0.342 0.357 10.60% MultiFab::min() 10 0.04431 0.101 0.1598 4.75% Castro::initData() 1 0.03979 0.08477 0.1327 3.94% Castro::estTimeStep() 21 0.02301 0.07446 0.1219 3.62% FabArray::setVal() 143 0.0653 0.07139 0.07654 2.27% FabArray::ParallelCopy_finish() 41 0.03106 0.04092 0.06807 2.02% Castro::reset_internal_energy() 63 0.0474 0.04971 0.05208 1.55% StateData::FillBoundary(geom) 41 0.03819 0.04174 0.04555 1.35% Castro::normalize_species() 62 0.04278 0.04364 0.04464 1.33% FabArray::ParallelCopy_nowait() 41 0.03456 0.04101 0.04356 1.29% FillPatchIterator::Initialize 41 0.02311 0.03097 0.03403 1.01% Gravity::interpolate_monopole_grav() 21 0.02761 0.028 0.0285 0.85% Castro::construct_new_gravity_source() 10 0.02119 0.0235 0.02564 0.76% Castro::do_advance_ctu() 10 0.0172 0.02012 0.02393 0.71% Castro::expand_state() 10 0.0115 0.01803 0.02068 0.61% Castro::computeTemp() 63 0.01745 0.01853 0.01951 0.58% Castro::initialize_do_advance() 10 0.01056 0.01611 0.0182 0.54% MultiFab::Saxpy() 20 0.01404 0.01498 0.01558 0.46% Castro::initialize_advance() 10 0.01073 0.0125 0.01445 0.43% VisMF::Write(FabArray) 2 0.01175 0.01222 0.01428 0.42% Gravity::get_new_grav_vector() 11 0.009765 0.01111 0.01291 0.38% MultiFab::contains_nan() 20 0.01052 0.01143 0.01268 0.38% Castro::construct_old_gravity_source() 10 0.007032 0.01099 0.01185 0.35% FabArray::setDomainBndry() 41 0.006722 0.01021 0.0115 0.34% Amr::writePlotFile() 2 0.008627 0.01045 0.01087 0.32% Gravity::get_old_grav_vector() 10 0.006792 0.009005 0.0101 0.30% Amr::defBaseLevel() 1 0.006622 0.007914 0.01003 0.30% Castro::construct_new_source() 50 0.005915 0.00637 0.006643 0.20% Castro::enforce_min_density() 62 0.00586 0.006118 0.00643 0.19% StateData::define() 4 0.004349 0.005128 0.006379 0.19% Castro::swap_state_time_levels() 10 0.003018 0.003807 0.003994 0.12% main() 1 0.003292 0.003676 0.003927 0.12% Amr::coarseTimeStep() 10 0.0008587 0.001019 0.001157 0.03% Castro::finalize_do_advance() 10 0.0004646 0.0008212 0.000988 0.03% Amr::timeStep() 10 0.0001602 0.0002292 0.0004933 0.01% Amr::InitAmr() 1 0.0002569 0.0003336 0.0004479 0.01% DistributionMapping::LeastUsedCPUs() 1 6.919e-06 0.0001549 0.0002541 0.01% Castro::clean_state() 62 0.0001226 0.000138 0.0001754 0.01% StateDataPhysBCFunct::() 41 0.0001101 0.0001332 0.0001647 0.00% Castro::enforce_consistent_e() 1 7.841e-05 8.784e-05 9.807e-05 0.00% Amr::FinalizeInit() 1 4.013e-06 1.623e-05 9.685e-05 0.00% Castro::construct_old_source() 50 6.323e-05 8.091e-05 9.524e-05 0.00% FabArray::ParallelCopy() 41 6.414e-05 7.339e-05 8.645e-05 0.00% FillPatchSingleLevel 41 5.595e-05 6.994e-05 7.948e-05 0.00% FabArrayBase::getCPC() 41 4.889e-05 5.612e-05 7.857e-05 0.00% Castro::do_old_sources() 10 5.432e-05 6.34e-05 7.75e-05 0.00% Amr::writeSmallPlotFile() 1 2.533e-05 4.657e-05 7.227e-05 0.00% Castro::do_new_sources() 10 5.301e-05 5.944e-05 7.037e-05 0.00% Castro::construct_new_gravity() 10 4.051e-05 5.209e-05 6.597e-05 0.00% Castro::subcycle_advance_ctu() 10 4.166e-05 5.217e-05 6.306e-05 0.00% Castro::construct_old_gravity() 10 5.119e-05 5.645e-05 6.022e-05 0.00% Castro::apply_source_to_state() 20 3.857e-05 4.927e-05 5.977e-05 0.00% Castro::finalize_advance() 10 4.8e-05 5.527e-05 5.964e-05 0.00% Castro::advance() 10 3.581e-05 4.261e-05 5.628e-05 0.00% Castro::enforce_speed_limit() 62 2.766e-05 3.246e-05 4.301e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.601e-05 2.111e-05 2.971e-05 0.00% Castro::check_for_nan() 20 2.418e-05 2.762e-05 2.927e-05 0.00% FabArrayBase::CPC::define() 2 2.346e-05 2.475e-05 2.685e-05 0.00% Castro::create_source_corrector() 10 1.561e-05 1.753e-05 1.92e-05 0.00% Gravity::swapTimeLevels() 10 1.276e-05 1.443e-05 1.729e-05 0.00% Amr::initSubcycle() 1 8.402e-06 1.056e-05 1.495e-05 0.00% Castro::post_init() 1 3.255e-06 4.793e-06 1.105e-05 0.00% Castro::post_timestep() 10 8.012e-06 9.742e-06 1.096e-05 0.00% Gravity::set_mass_offset() 10 7.191e-06 7.801e-06 8.736e-06 0.00% Castro::computeNewDt() 9 6.788e-06 7.653e-06 8.495e-06 0.00% Castro::FluxRegFineAdd() 10 6.179e-06 6.758e-06 7.752e-06 0.00% Amr::InitializeInit() 1 2.222e-06 3.068e-06 7.009e-06 0.00% Castro::retry_advance_ctu() 10 4.891e-06 5.789e-06 6.449e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.867e-06 4.703e-06 5.746e-06 0.00% Castro::computeInitialDt() 2 3.371e-06 3.859e-06 4.364e-06 0.00% Castro::post_regrid() 1 2.111e-06 3.036e-06 3.997e-06 0.00% Amr::init() 1 1.734e-06 2.218e-06 2.911e-06 0.00% Amr::initialInit() 1 1.272e-06 1.774e-06 2.347e-06 0.00% DistributionMapping::Distribute() 1 1.032e-06 1.188e-06 1.494e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.366 3.367 3.367 100.00% Amr::coarseTimeStep() 10 3.159 3.159 3.159 93.82% Amr::timeStep() 10 3.148 3.149 3.149 93.54% Castro::advance() 10 3.132 3.133 3.133 93.05% Castro::subcycle_advance_ctu() 10 3.054 3.056 3.058 90.82% Castro::do_advance_ctu() 10 3.054 3.056 3.058 90.82% Castro::construct_ctu_hydro_source() 10 2.126 2.181 2.232 66.30% Gravity::make_radial_gravity() 21 0.3284 0.342 0.357 10.60% Gravity::get_new_grav_vector() 11 0.2216 0.2226 0.2233 6.63% Castro::construct_old_gravity() 10 0.1949 0.2051 0.2179 6.47% Gravity::get_old_grav_vector() 10 0.194 0.2043 0.2173 6.45% Castro::construct_new_gravity() 10 0.198 0.1992 0.2002 5.94% Amr::init() 1 0.194 0.1941 0.1942 5.77% Amr::initialInit() 1 0.1809 0.1812 0.1814 5.39% FillPatchIterator::Initialize 41 0.1581 0.1652 0.1711 5.08% Castro::initialize_do_advance() 10 0.1423 0.1547 0.1608 4.77% MultiFab::min() 10 0.04431 0.101 0.1598 4.75% Amr::InitializeInit() 1 0.05751 0.1038 0.1544 4.59% Amr::defBaseLevel() 1 0.05751 0.1038 0.1544 4.59% FillPatchSingleLevel 41 0.1135 0.124 0.1413 4.20% Castro::initData() 1 0.04382 0.08855 0.1363 4.05% Amr::FinalizeInit() 1 0.02671 0.07747 0.1234 3.67% Castro::estTimeStep() 21 0.02301 0.07446 0.1219 3.62% Castro::clean_state() 62 0.115 0.1172 0.1205 3.58% Castro::expand_state() 10 0.1015 0.1073 0.1123 3.34% FabArray::ParallelCopy() 41 0.07255 0.08208 0.1028 3.05% Castro::computeInitialDt() 2 0.001751 0.05255 0.09875 2.93% Castro::initialize_advance() 10 0.07464 0.07624 0.07848 2.33% FabArray::setVal() 143 0.0653 0.07139 0.07654 2.27% Castro::computeTemp() 63 0.06485 0.06824 0.07159 2.13% FabArray::ParallelCopy_finish() 41 0.03106 0.04092 0.06807 2.02% Castro::do_new_sources() 10 0.0594 0.06266 0.06779 2.01% Castro::reset_internal_energy() 63 0.0474 0.04971 0.05208 1.55% Castro::do_old_sources() 10 0.04226 0.04727 0.04857 1.44% StateDataPhysBCFunct::() 41 0.03835 0.04187 0.04567 1.36% StateData::FillBoundary(geom) 41 0.03819 0.04174 0.04555 1.35% Castro::normalize_species() 62 0.04278 0.04364 0.04464 1.33% FabArray::ParallelCopy_nowait() 41 0.03466 0.04109 0.04364 1.30% Castro::construct_new_source() 50 0.02711 0.02987 0.03229 0.96% Gravity::interpolate_monopole_grav() 21 0.02761 0.028 0.0285 0.85% Castro::construct_new_gravity_source() 10 0.02119 0.0235 0.02564 0.76% Castro::post_init() 1 0.02397 0.02437 0.02457 0.73% Amr::writePlotFile() 2 0.02251 0.02267 0.0229 0.68% Castro::post_timestep() 10 0.015 0.01589 0.01649 0.49% Castro::apply_source_to_state() 20 0.01408 0.01503 0.01563 0.46% MultiFab::Saxpy() 20 0.01404 0.01498 0.01558 0.46% VisMF::Write(FabArray) 2 0.01175 0.01222 0.01428 0.42% Castro::check_for_nan() 20 0.01054 0.01146 0.01271 0.38% MultiFab::contains_nan() 20 0.01052 0.01143 0.01268 0.38% Castro::construct_old_source() 50 0.007096 0.01107 0.01195 0.35% Castro::construct_old_gravity_source() 10 0.007032 0.01099 0.01185 0.35% FabArray::setDomainBndry() 41 0.006722 0.01021 0.0115 0.34% Castro::computeNewDt() 9 0.006942 0.007892 0.008623 0.26% Castro::enforce_min_density() 62 0.00586 0.006118 0.00643 0.19% AmrLevel::AmrLevel(dm) 1 0.004379 0.005149 0.006403 0.19% StateData::define() 4 0.004349 0.005128 0.006379 0.19% Castro::swap_state_time_levels() 10 0.003018 0.003807 0.003994 0.12% Castro::post_regrid() 1 0.001528 0.001591 0.001673 0.05% Castro::finalize_do_advance() 10 0.0004646 0.0008212 0.000988 0.03% Amr::InitAmr() 1 0.0002658 0.0003442 0.0004629 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.345e-05 0.0001608 0.0002609 0.01% DistributionMapping::LeastUsedCPUs() 1 6.919e-06 0.0001549 0.0002541 0.01% FabArrayBase::getCPC() 41 7.286e-05 8.087e-05 0.0001027 0.00% Castro::enforce_consistent_e() 1 7.841e-05 8.784e-05 9.807e-05 0.00% Amr::writeSmallPlotFile() 1 2.533e-05 4.657e-05 7.227e-05 0.00% Castro::finalize_advance() 10 5.468e-05 6.203e-05 6.69e-05 0.00% Castro::enforce_speed_limit() 62 2.766e-05 3.246e-05 4.301e-05 0.00% FabArrayBase::CPC::define() 2 2.346e-05 2.475e-05 2.685e-05 0.00% Castro::create_source_corrector() 10 1.561e-05 1.753e-05 1.92e-05 0.00% Gravity::swapTimeLevels() 10 1.276e-05 1.443e-05 1.729e-05 0.00% Amr::initSubcycle() 1 8.402e-06 1.056e-05 1.495e-05 0.00% Gravity::set_mass_offset() 10 7.191e-06 7.801e-06 8.736e-06 0.00% Castro::FluxRegFineAdd() 10 6.179e-06 6.758e-06 7.752e-06 0.00% Castro::retry_advance_ctu() 10 4.891e-06 5.789e-06 6.449e-06 0.00% DistributionMapping::Distribute() 1 1.032e-06 1.188e-06 1.494e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-33-g9907ac197518) finalized