MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-34-g8b691cbf8ddb) initialized Starting run at 05:43:47 UTC on 2022-03-30. Successfully read inputs file ... Castro git describe: 22.02-19-ga92ac477d AMReX git describe: 22.03-34-g8b691cbf8 Microphysics git describe: 22.03-14-g4f1304ed reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.017489619 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.418594059 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.337152441 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.319434305 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.314311055 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.328194634 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.315237842 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.294669528 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.294648873 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.295893918 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.295179527 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009681662 seconds Ending run at 05:43:51 UTC on 2022-03-30. Run time = 3.453610533 Run time without initialization = 3.226357779 Average number of zones advanced per microsecond: 0.813 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.453 ... 3.453 ... 3.454 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1566 2.2044 2.2659 65.61% Gravity::make_radial_gravity() 21 0.3709 0.3825 0.3941 11.41% Castro::initData() 1 0.06235 0.09911 0.1448 4.19% MultiFab::min() 10 0.02582 0.09153 0.1421 4.11% Castro::estTimeStep() 21 0.03258 0.0768 0.1169 3.39% FabArray::setVal() 143 0.06497 0.07262 0.08288 2.40% FabArray::ParallelCopy_finish() 41 0.04115 0.05154 0.06573 1.90% Castro::reset_internal_energy() 63 0.05067 0.0523 0.0538 1.56% Castro::normalize_species() 62 0.04383 0.04576 0.04939 1.43% StateData::FillBoundary(geom) 41 0.04043 0.0429 0.04773 1.38% FabArray::ParallelCopy_nowait() 41 0.03461 0.03852 0.04045 1.17% FillPatchIterator::Initialize 41 0.02448 0.02932 0.03312 0.96% Gravity::interpolate_monopole_grav() 21 0.02863 0.02924 0.03068 0.89% Castro::construct_new_gravity_source() 10 0.02164 0.02431 0.02846 0.82% Castro::do_advance_ctu() 10 0.01573 0.01882 0.02213 0.64% Castro::computeTemp() 63 0.01906 0.01983 0.02182 0.63% Castro::expand_state() 10 0.0121 0.01685 0.01941 0.56% Castro::initialize_do_advance() 10 0.0113 0.01671 0.01885 0.55% VisMF::Write(FabArray) 2 0.01196 0.01334 0.01705 0.49% Amr::writePlotFile() 2 0.01039 0.01345 0.01558 0.45% MultiFab::Saxpy() 20 0.01245 0.01407 0.01458 0.42% Castro::initialize_advance() 10 0.009763 0.01171 0.01386 0.40% MultiFab::contains_nan() 20 0.0105 0.01123 0.01376 0.40% Gravity::get_new_grav_vector() 11 0.008423 0.01054 0.01364 0.39% Castro::construct_old_gravity_source() 10 0.007462 0.01011 0.01069 0.31% FabArray::setDomainBndry() 41 0.006938 0.009126 0.01044 0.30% Amr::defBaseLevel() 1 0.00658 0.008449 0.009886 0.29% Gravity::get_old_grav_vector() 10 0.006922 0.008413 0.009725 0.28% Castro::enforce_min_density() 62 0.005871 0.006297 0.006992 0.20% StateData::define() 4 0.004329 0.005563 0.006541 0.19% Castro::construct_new_source() 50 0.00599 0.006257 0.006441 0.19% Castro::swap_state_time_levels() 10 0.003381 0.00404 0.005123 0.15% main() 1 0.003663 0.003912 0.004163 0.12% Amr::coarseTimeStep() 10 0.0003484 0.0007111 0.001453 0.04% Castro::finalize_do_advance() 10 0.0004739 0.001062 0.001244 0.04% Amr::InitAmr() 1 0.0002687 0.0003949 0.000553 0.02% Amr::timeStep() 10 0.0001717 0.000225 0.0004305 0.01% DistributionMapping::LeastUsedCPUs() 1 8.355e-06 0.0002012 0.0003472 0.01% Castro::clean_state() 62 0.0001144 0.0001366 0.000172 0.00% Castro::enforce_consistent_e() 1 8.621e-05 0.00011 0.0001503 0.00% StateDataPhysBCFunct::() 41 0.000106 0.0001224 0.000135 0.00% Amr::FinalizeInit() 1 4.259e-06 1.506e-05 8.397e-05 0.00% Castro::construct_old_source() 50 4.524e-05 6.416e-05 8.119e-05 0.00% FabArray::ParallelCopy() 41 5.779e-05 6.833e-05 7.703e-05 0.00% FillPatchSingleLevel 41 6.044e-05 6.663e-05 7.542e-05 0.00% Castro::do_new_sources() 10 4.188e-05 5.722e-05 6.765e-05 0.00% FabArrayBase::getCPC() 41 4.524e-05 5.262e-05 6.657e-05 0.00% Amr::writeSmallPlotFile() 1 2.499e-05 4.728e-05 6.571e-05 0.00% Castro::construct_old_gravity() 10 4.228e-05 5.188e-05 6.246e-05 0.00% Castro::do_old_sources() 10 3.947e-05 5.349e-05 6.232e-05 0.00% Castro::finalize_advance() 10 5.127e-05 5.438e-05 5.986e-05 0.00% Castro::subcycle_advance_ctu() 10 3.58e-05 4.771e-05 5.868e-05 0.00% Castro::advance() 10 3.101e-05 4.112e-05 5.613e-05 0.00% Castro::construct_new_gravity() 10 3.852e-05 4.428e-05 5.459e-05 0.00% Castro::apply_source_to_state() 20 3.52e-05 4.479e-05 5.236e-05 0.00% Castro::enforce_speed_limit() 62 2.71e-05 3.251e-05 4.701e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.297e-05 2.022e-05 3.48e-05 0.00% FabArrayBase::CPC::define() 2 2.146e-05 2.824e-05 3.287e-05 0.00% Castro::check_for_nan() 20 2.17e-05 2.453e-05 2.652e-05 0.00% Castro::create_source_corrector() 10 1.503e-05 1.726e-05 2.189e-05 0.00% Gravity::swapTimeLevels() 10 1.124e-05 1.456e-05 1.98e-05 0.00% Castro::post_timestep() 10 8.435e-06 1.383e-05 1.915e-05 0.00% Amr::initSubcycle() 1 8.273e-06 1.228e-05 1.495e-05 0.00% Castro::post_init() 1 3.842e-06 4.94e-06 9.378e-06 0.00% Castro::computeNewDt() 9 6.73e-06 7.644e-06 8.847e-06 0.00% Amr::InitializeInit() 1 2.233e-06 3.936e-06 8.781e-06 0.00% Gravity::set_mass_offset() 10 7.282e-06 8.017e-06 8.493e-06 0.00% Castro::retry_advance_ctu() 10 5.258e-06 6.428e-06 7.446e-06 0.00% Castro::FluxRegFineAdd() 10 5.566e-06 6.638e-06 7.218e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.859e-06 5.017e-06 6.325e-06 0.00% Castro::computeInitialDt() 2 3.812e-06 4.486e-06 5.219e-06 0.00% Castro::post_regrid() 1 2.292e-06 3.613e-06 5.104e-06 0.00% Amr::init() 1 2.21e-06 2.542e-06 3.104e-06 0.00% Amr::initialInit() 1 1.361e-06 1.775e-06 2.13e-06 0.00% DistributionMapping::Distribute() 1 8.9e-07 1.325e-06 1.578e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.453 3.453 3.454 100.00% Amr::coarseTimeStep() 10 3.213 3.213 3.213 93.02% Amr::timeStep() 10 3.202 3.203 3.204 92.76% Castro::advance() 10 3.186 3.186 3.186 92.26% Castro::subcycle_advance_ctu() 10 3.1 3.108 3.115 90.19% Castro::do_advance_ctu() 10 3.1 3.108 3.115 90.18% Castro::construct_ctu_hydro_source() 10 2.157 2.204 2.266 65.61% Gravity::make_radial_gravity() 21 0.3709 0.3825 0.3941 11.41% Gravity::get_new_grav_vector() 11 0.2399 0.2452 0.2472 7.16% Castro::construct_old_gravity() 10 0.2158 0.224 0.2329 6.74% Gravity::get_old_grav_vector() 10 0.215 0.2233 0.2323 6.72% Amr::init() 1 0.2265 0.2267 0.2268 6.57% Amr::initialInit() 1 0.2088 0.2096 0.2104 6.09% Castro::construct_new_gravity() 10 0.2034 0.2069 0.2091 6.05% FillPatchIterator::Initialize 41 0.1539 0.1718 0.1812 5.25% Castro::initialize_do_advance() 10 0.1475 0.1622 0.1757 5.09% Amr::InitializeInit() 1 0.08467 0.12 0.1675 4.85% Amr::defBaseLevel() 1 0.08467 0.12 0.1675 4.85% Castro::initData() 1 0.06621 0.1038 0.1491 4.32% MultiFab::min() 10 0.02582 0.09153 0.1421 4.11% FillPatchSingleLevel 41 0.1204 0.1333 0.1417 4.10% Castro::clean_state() 62 0.1189 0.1231 0.1284 3.72% Amr::FinalizeInit() 1 0.04239 0.08968 0.125 3.62% Castro::expand_state() 10 0.09792 0.113 0.1243 3.60% Castro::estTimeStep() 21 0.03258 0.0768 0.1169 3.39% FabArray::ParallelCopy() 41 0.07973 0.09021 0.1005 2.91% Castro::initialize_advance() 10 0.07143 0.07787 0.08579 2.48% Castro::computeInitialDt() 2 0.002186 0.04981 0.08504 2.46% FabArray::setVal() 143 0.06497 0.07262 0.08288 2.40% Castro::do_new_sources() 10 0.05936 0.06465 0.07437 2.15% Castro::computeTemp() 63 0.06983 0.07213 0.07413 2.15% FabArray::ParallelCopy_finish() 41 0.04115 0.05154 0.06573 1.90% Castro::reset_internal_energy() 63 0.05067 0.0523 0.0538 1.56% Castro::normalize_species() 62 0.04383 0.04576 0.04939 1.43% StateDataPhysBCFunct::() 41 0.04055 0.04303 0.04786 1.39% StateData::FillBoundary(geom) 41 0.04043 0.0429 0.04773 1.38% Castro::do_old_sources() 10 0.04153 0.0454 0.04769 1.38% FabArray::ParallelCopy_nowait() 41 0.03469 0.0386 0.04053 1.17% Castro::post_init() 1 0.03769 0.03907 0.03972 1.15% Castro::construct_new_source() 50 0.02792 0.03057 0.0349 1.01% Gravity::interpolate_monopole_grav() 21 0.02863 0.02924 0.03068 0.89% Castro::construct_new_gravity_source() 10 0.02164 0.02431 0.02846 0.82% Amr::writePlotFile() 2 0.02598 0.0268 0.02765 0.80% Castro::post_timestep() 10 0.01591 0.01635 0.0171 0.50% VisMF::Write(FabArray) 2 0.01196 0.01334 0.01705 0.49% Castro::apply_source_to_state() 20 0.0125 0.01411 0.01463 0.42% MultiFab::Saxpy() 20 0.01245 0.01407 0.01458 0.42% Castro::check_for_nan() 20 0.01052 0.01125 0.01378 0.40% MultiFab::contains_nan() 20 0.0105 0.01123 0.01376 0.40% Castro::construct_old_source() 50 0.007507 0.01017 0.01075 0.31% Castro::construct_old_gravity_source() 10 0.007462 0.01011 0.01069 0.31% FabArray::setDomainBndry() 41 0.006938 0.009126 0.01044 0.30% Castro::computeNewDt() 9 0.00704 0.007796 0.008357 0.24% Castro::enforce_min_density() 62 0.005871 0.006297 0.006992 0.20% AmrLevel::AmrLevel(dm) 1 0.004342 0.005583 0.006562 0.19% StateData::define() 4 0.004329 0.005563 0.006541 0.19% Castro::swap_state_time_levels() 10 0.003381 0.00404 0.005123 0.15% Castro::post_regrid() 1 0.001647 0.002147 0.00292 0.08% Castro::finalize_do_advance() 10 0.0004739 0.001062 0.001244 0.04% Amr::InitAmr() 1 0.0002778 0.0004071 0.000568 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.497e-05 0.0002075 0.0003548 0.01% DistributionMapping::LeastUsedCPUs() 1 8.355e-06 0.0002012 0.0003472 0.01% Castro::enforce_consistent_e() 1 8.621e-05 0.00011 0.0001503 0.00% FabArrayBase::getCPC() 41 6.929e-05 8.086e-05 9.944e-05 0.00% Castro::finalize_advance() 10 5.823e-05 6.101e-05 6.708e-05 0.00% Amr::writeSmallPlotFile() 1 2.499e-05 4.728e-05 6.571e-05 0.00% Castro::enforce_speed_limit() 62 2.71e-05 3.251e-05 4.701e-05 0.00% FabArrayBase::CPC::define() 2 2.146e-05 2.824e-05 3.287e-05 0.00% Castro::create_source_corrector() 10 1.503e-05 1.726e-05 2.189e-05 0.00% Gravity::swapTimeLevels() 10 1.124e-05 1.456e-05 1.98e-05 0.00% Amr::initSubcycle() 1 8.273e-06 1.228e-05 1.495e-05 0.00% Gravity::set_mass_offset() 10 7.282e-06 8.017e-06 8.493e-06 0.00% Castro::retry_advance_ctu() 10 5.258e-06 6.428e-06 7.446e-06 0.00% Castro::FluxRegFineAdd() 10 5.566e-06 6.638e-06 7.218e-06 0.00% DistributionMapping::Distribute() 1 8.9e-07 1.325e-06 1.578e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-34-g8b691cbf8ddb) finalized