MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.03-35-g3aafa306ad82) initialized Starting run at 05:37:12 UTC on 2022-03-31. Successfully read inputs file ... Castro git describe: 22.02-19-ga92ac477d AMReX git describe: 22.03-35-g3aafa306a Microphysics git describe: 22.03-14-g4f1304ed reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013213228 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.354712122 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.366101507 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.335513634 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.312090424 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.312883469 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.341895661 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.298361753 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.292543453 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.294009735 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.293447191 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.012280467 seconds Ending run at 05:37:16 UTC on 2022-03-31. Run time = 3.420386461 Run time without initialization = 3.217429419 Average number of zones advanced per microsecond: 0.815 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.42 ... 3.42 ... 3.42 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1356 2.1871 2.2409 65.52% Gravity::make_radial_gravity() 21 0.357 0.3759 0.3945 11.53% MultiFab::min() 10 0.04972 0.105 0.159 4.65% Castro::initData() 1 0.0395 0.08387 0.1385 4.05% Castro::estTimeStep() 21 0.0266 0.07975 0.1213 3.54% FabArray::ParallelCopy_finish() 41 0.03724 0.05225 0.09107 2.66% FabArray::setVal() 143 0.05347 0.06642 0.07409 2.17% Castro::reset_internal_energy() 63 0.04926 0.05049 0.05151 1.51% StateData::FillBoundary(geom) 41 0.03992 0.04358 0.05077 1.48% Castro::normalize_species() 62 0.04317 0.04416 0.04582 1.34% FabArray::ParallelCopy_nowait() 41 0.03438 0.03985 0.04173 1.22% FillPatchIterator::Initialize 41 0.02339 0.03 0.0331 0.97% Gravity::interpolate_monopole_grav() 21 0.02777 0.02824 0.02932 0.86% Castro::expand_state() 10 0.0114 0.01882 0.0289 0.84% Castro::construct_new_gravity_source() 10 0.02005 0.02277 0.02434 0.71% Castro::do_advance_ctu() 10 0.01546 0.01883 0.0225 0.66% Castro::computeTemp() 63 0.01839 0.01902 0.01967 0.58% Castro::initialize_do_advance() 10 0.01037 0.01576 0.01768 0.52% MultiFab::Saxpy() 20 0.01208 0.01425 0.01619 0.47% Amr::writePlotFile() 2 0.01103 0.01365 0.01506 0.44% MultiFab::contains_nan() 20 0.01036 0.0122 0.01501 0.44% VisMF::Write(FabArray) 2 0.01096 0.01206 0.01467 0.43% Castro::initialize_advance() 10 0.00381 0.01015 0.01318 0.39% Gravity::get_new_grav_vector() 11 0.009165 0.01074 0.01235 0.36% Castro::construct_old_gravity_source() 10 0.007224 0.01023 0.01213 0.35% FabArray::setDomainBndry() 41 0.006551 0.009882 0.01156 0.34% Gravity::get_old_grav_vector() 10 0.007234 0.009098 0.01099 0.32% Amr::defBaseLevel() 1 0.006713 0.008007 0.01009 0.30% Castro::construct_new_source() 50 0.005637 0.006287 0.00655 0.19% Castro::enforce_min_density() 62 0.005658 0.005963 0.006455 0.19% StateData::define() 4 0.004484 0.005225 0.00643 0.19% Castro::swap_state_time_levels() 10 0.002478 0.003545 0.004244 0.12% main() 1 0.003534 0.003785 0.00393 0.11% Amr::coarseTimeStep() 10 0.0003666 0.0005814 0.00113 0.03% Castro::finalize_do_advance() 10 0.0004466 0.0008102 0.0009233 0.03% Amr::timeStep() 10 0.0001688 0.000227 0.0004648 0.01% Amr::InitAmr() 1 0.0002822 0.0003405 0.0004541 0.01% DistributionMapping::LeastUsedCPUs() 1 6.946e-06 0.0001346 0.0002035 0.01% StateDataPhysBCFunct::() 41 0.0001041 0.0001334 0.0001781 0.01% Castro::clean_state() 62 0.0001303 0.0001373 0.0001545 0.00% Castro::enforce_consistent_e() 1 7.925e-05 9.459e-05 0.000125 0.00% Castro::construct_old_source() 50 4.11e-05 6.483e-05 8.452e-05 0.00% FillPatchSingleLevel 41 6.264e-05 6.766e-05 7.526e-05 0.00% FabArray::ParallelCopy() 41 6.067e-05 6.496e-05 7.414e-05 0.00% Castro::do_new_sources() 10 4.409e-05 5.528e-05 7.116e-05 0.00% Amr::FinalizeInit() 1 3.921e-06 1.215e-05 6.624e-05 0.00% Amr::writeSmallPlotFile() 1 2.557e-05 5.748e-05 6.375e-05 0.00% Castro::subcycle_advance_ctu() 10 4.25e-05 5.442e-05 6.214e-05 0.00% FabArrayBase::getCPC() 41 4.32e-05 5.035e-05 6.148e-05 0.00% Castro::do_old_sources() 10 4.025e-05 5.248e-05 5.874e-05 0.00% Castro::advance() 10 3.405e-05 4.134e-05 5.728e-05 0.00% Castro::construct_old_gravity() 10 4.11e-05 4.962e-05 5.533e-05 0.00% Castro::finalize_advance() 10 5.17e-05 5.343e-05 5.523e-05 0.00% Castro::construct_new_gravity() 10 3.796e-05 4.473e-05 5.197e-05 0.00% Castro::apply_source_to_state() 20 3.363e-05 4.242e-05 4.942e-05 0.00% Castro::enforce_speed_limit() 62 2.674e-05 3.456e-05 4.185e-05 0.00% Castro::check_for_nan() 20 2.32e-05 2.536e-05 2.878e-05 0.00% FabArrayBase::CPC::define() 2 2.342e-05 2.588e-05 2.782e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.906e-05 2.222e-05 2.573e-05 0.00% Castro::create_source_corrector() 10 1.34e-05 1.717e-05 2.001e-05 0.00% Amr::initSubcycle() 1 8.895e-06 1.099e-05 1.498e-05 0.00% Gravity::swapTimeLevels() 10 7.401e-06 1.207e-05 1.471e-05 0.00% Castro::post_timestep() 10 8.017e-06 9.68e-06 1.162e-05 0.00% Castro::post_init() 1 2.865e-06 4.638e-06 1.013e-05 0.00% Gravity::set_mass_offset() 10 7.23e-06 8.37e-06 9.252e-06 0.00% Castro::computeNewDt() 9 7.322e-06 8.18e-06 9.14e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.006e-06 5.302e-06 7.875e-06 0.00% Castro::FluxRegFineAdd() 10 6.051e-06 6.61e-06 7.768e-06 0.00% Castro::retry_advance_ctu() 10 5.673e-06 6.59e-06 7.194e-06 0.00% Amr::InitializeInit() 1 2.283e-06 4.429e-06 6.628e-06 0.00% Castro::computeInitialDt() 2 3.033e-06 4.046e-06 4.896e-06 0.00% Castro::post_regrid() 1 1.821e-06 3.083e-06 4.081e-06 0.00% Amr::init() 1 1.855e-06 2.261e-06 2.733e-06 0.00% Amr::initialInit() 1 1.278e-06 1.579e-06 1.983e-06 0.00% DistributionMapping::Distribute() 1 9.83e-07 1.14e-06 1.31e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.42 3.42 3.42 100.00% Amr::coarseTimeStep() 10 3.201 3.201 3.201 93.59% Amr::timeStep() 10 3.192 3.192 3.193 93.34% Castro::advance() 10 3.176 3.177 3.177 92.87% Castro::subcycle_advance_ctu() 10 3.102 3.107 3.124 91.33% Castro::do_advance_ctu() 10 3.102 3.107 3.124 91.33% Castro::construct_ctu_hydro_source() 10 2.136 2.187 2.241 65.52% Gravity::make_radial_gravity() 21 0.357 0.3759 0.3945 11.53% Castro::construct_old_gravity() 10 0.2197 0.2361 0.2528 7.39% Gravity::get_old_grav_vector() 10 0.2186 0.2354 0.2522 7.37% Gravity::get_new_grav_vector() 11 0.2245 0.2264 0.2277 6.66% Amr::init() 1 0.2023 0.2025 0.2025 5.92% Castro::construct_new_gravity() 10 0.1998 0.201 0.2022 5.91% FillPatchIterator::Initialize 41 0.1626 0.1759 0.1975 5.77% Amr::initialInit() 1 0.1886 0.1891 0.1896 5.54% Castro::initialize_do_advance() 10 0.1509 0.1604 0.1678 4.91% FillPatchSingleLevel 41 0.1259 0.136 0.1675 4.90% Amr::InitializeInit() 1 0.05688 0.103 0.1605 4.69% Amr::defBaseLevel() 1 0.05688 0.103 0.1605 4.69% MultiFab::min() 10 0.04972 0.105 0.159 4.65% Castro::initData() 1 0.04329 0.0877 0.1422 4.16% Amr::FinalizeInit() 1 0.02812 0.08612 0.1322 3.86% FabArray::ParallelCopy() 41 0.07813 0.09224 0.1256 3.67% Castro::clean_state() 62 0.1163 0.1189 0.1215 3.55% Castro::estTimeStep() 21 0.0266 0.07975 0.1213 3.54% Castro::expand_state() 10 0.1026 0.1128 0.1207 3.53% Castro::computeInitialDt() 2 0.001677 0.05936 0.1054 3.08% FabArray::ParallelCopy_finish() 41 0.03724 0.05225 0.09107 2.66% Castro::initialize_advance() 10 0.05205 0.06896 0.07419 2.17% FabArray::setVal() 143 0.05347 0.06642 0.07409 2.17% Castro::computeTemp() 63 0.06766 0.06951 0.07048 2.06% Castro::do_new_sources() 10 0.05712 0.06191 0.06605 1.93% Castro::do_old_sources() 10 0.04105 0.04677 0.05274 1.54% Castro::reset_internal_energy() 63 0.04926 0.05049 0.05151 1.51% StateDataPhysBCFunct::() 41 0.04004 0.04371 0.05088 1.49% StateData::FillBoundary(geom) 41 0.03992 0.04358 0.05077 1.48% Castro::normalize_species() 62 0.04317 0.04416 0.04582 1.34% FabArray::ParallelCopy_nowait() 41 0.03446 0.03993 0.04181 1.22% Castro::construct_new_source() 50 0.02569 0.02905 0.03089 0.90% Gravity::interpolate_monopole_grav() 21 0.02777 0.02824 0.02932 0.86% Castro::post_init() 1 0.02603 0.02619 0.0264 0.77% Amr::writePlotFile() 2 0.02529 0.02571 0.02602 0.76% Castro::construct_new_gravity_source() 10 0.02005 0.02277 0.02434 0.71% Castro::apply_source_to_state() 20 0.01212 0.01429 0.01624 0.47% MultiFab::Saxpy() 20 0.01208 0.01425 0.01619 0.47% Castro::post_timestep() 10 0.01534 0.01573 0.01598 0.47% Castro::check_for_nan() 20 0.01038 0.01222 0.01504 0.44% MultiFab::contains_nan() 20 0.01036 0.0122 0.01501 0.44% VisMF::Write(FabArray) 2 0.01096 0.01206 0.01467 0.43% Castro::construct_old_source() 50 0.007265 0.0103 0.01218 0.36% Castro::construct_old_gravity_source() 10 0.007224 0.01023 0.01213 0.35% FabArray::setDomainBndry() 41 0.006551 0.009882 0.01156 0.34% Castro::computeNewDt() 9 0.006756 0.007195 0.007504 0.22% Castro::enforce_min_density() 62 0.005658 0.005963 0.006455 0.19% AmrLevel::AmrLevel(dm) 1 0.004503 0.005247 0.006452 0.19% StateData::define() 4 0.004484 0.005225 0.00643 0.19% Castro::swap_state_time_levels() 10 0.002478 0.003545 0.004244 0.12% Castro::post_regrid() 1 0.001366 0.001581 0.001944 0.06% Castro::finalize_do_advance() 10 0.0004466 0.0008102 0.0009233 0.03% Amr::InitAmr() 1 0.0002916 0.0003515 0.0004691 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.249e-05 0.000141 0.000212 0.01% DistributionMapping::LeastUsedCPUs() 1 6.946e-06 0.0001346 0.0002035 0.01% Castro::enforce_consistent_e() 1 7.925e-05 9.459e-05 0.000125 0.00% FabArrayBase::getCPC() 41 6.822e-05 7.623e-05 8.585e-05 0.00% Amr::writeSmallPlotFile() 1 2.557e-05 5.748e-05 6.375e-05 0.00% Castro::finalize_advance() 10 5.855e-05 6.004e-05 6.231e-05 0.00% Castro::enforce_speed_limit() 62 2.674e-05 3.456e-05 4.185e-05 0.00% FabArrayBase::CPC::define() 2 2.342e-05 2.588e-05 2.782e-05 0.00% Castro::create_source_corrector() 10 1.34e-05 1.717e-05 2.001e-05 0.00% Amr::initSubcycle() 1 8.895e-06 1.099e-05 1.498e-05 0.00% Gravity::swapTimeLevels() 10 7.401e-06 1.207e-05 1.471e-05 0.00% Gravity::set_mass_offset() 10 7.23e-06 8.37e-06 9.252e-06 0.00% Castro::FluxRegFineAdd() 10 6.051e-06 6.61e-06 7.768e-06 0.00% Castro::retry_advance_ctu() 10 5.673e-06 6.59e-06 7.194e-06 0.00% DistributionMapping::Distribute() 1 9.83e-07 1.14e-06 1.31e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.03-35-g3aafa306ad82) finalized